Journal: Scientific Reports
Article Title: ADAPT-3D:accelerated deep adaptable processing of tissue for 3-dimensional fluorescence tissue imaging for research and clinical settings
doi: 10.1038/s41598-025-16766-z
Figure Lengend Snippet: Effect of ADAPT-3D on finicky antigens and compatibility with deep immunolabeling. A ) Maximum intensity projections of tight junctions (arachnoid barrier: occludin in red and claudin-11 in green, endothelial-cell specific: claudin-5 in grey) found in leptomeninges from a wildtype mouse imaged by confocal microscopy. B ) Extended display showing en face and x-z projections of mouse ileum that was immunolabeled with alpha smooth muscle actin (yellow), lymphatic vasculature (LYVE-1, magenta), myeloid cells (S100A9, cyan), and nuclei (DAPI, grey) followed by imaging with confocal microscopy. C ) Extended display showing en face and x-z projections of ileum from a 16-week-old mouse that expresses TNF ΔARE , a model of ileitis. D ) Extended display showing en face, z-side, and 3D projections of fixed human ileum applied with decolorization, delipidation, immunolabeling with CD163 (green), IBA1 (red), and nuclei (DAPI, grey) followed by refractive index matching.
Article Snippet: 1 cm 3 samples were rinsed in 1X PBS-H for 2 h, incubated in ADAPT:DC for 2 days, ADAPT:PDL for 1 day, followed by ADAPT:BS containing antibodies against CD163 (Clone EDHu-1, Bio-Rad, 1:100), IBA1 (Fujifilm Wako, 019-19741, 1:100), and DAPI (Sigma-Aldrich, D9542, 1:200) for 2 days.
Techniques: Immunolabeling, Confocal Microscopy, Imaging, Refractive Index