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Lasergen Inc software seqman v. 7.0.0
Software Seqman V. 7.0.0, supplied by Lasergen Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/lasergene+sequence+alignment+software/seqman+software/pmc08466006-431-9-14
Average 90 stars, based on 1 article reviews
software seqman v. 7.0.0 - by Bioz Stars, 2026-10
90/100 stars

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Related Articles

Generated:

Article Title: Water Stress Enhances the Progression of Branch Dieback and Almond Decline under Field Conditions
Article Snippet: .. Consensus sequences from DNA sequences generated with forward and reverse primers were obtained with the SeqMan software (DNASTART Lasergen SeqMan ® v. 7.0.0, Madison, WI, USA). ..

Article Title: Etiology of Septoria Leaf Spot of Pistachio in Southern Spain
Article Snippet: Septoria leaf spot (SLS) is the most prevalent disease of pistachio (Pistacia vera L.) in Spain.. To elucidate its etiology, 22 samples of pistachio leaves showing SLS symptoms were collected mainly from 1993 to 2018 across southern Spain.. Affected leaves from terebinth (P. terebinthus) were also collected for comparative purposes.

Article Title: Vascular Fungi Associated with Branch Dieback of Olive in Super-High-Density Systems in Southern Spain
Article Snippet: 1 1 Vascular Fungi Associated with Branch Dieback of Olive in Super2 High-Density Systems in Southern Spain 3 Carlos Agustí-Brisach, José Pablo Jiménez-Urbano, María C. Raya, Ana López4 Moral, and Antonio Trapero†, 5 Departamento de Agronomía, ETSIAM, Universidad de Córdoba, Campus de 6 Rabanales, Edif.. C4, 14071 Córdoba, Spain.. 7 †Corresponding author: A. Trapero; E-mail: trapero@uco.es 8 Funding: This research was funded by the Spanish Ministry of Science, Innovation and 9 Universities (MICINN; project AGL2016-76240-R), co-financed by the European 10 Regional Development Fund (ERDF), European Union.

Article Title: Aetiology of branch dieback, panicle and shoot blight of pistachio associated with fungal trunk pathogens in southern Spain
Article Snippet: Pistachio represents an emerging nut crop across the Mediterranean basin.. In Spain, pistachio has been traditionally cultivated in marginal-dry areas with unfavourable climatic conditions for plant diseases.. Consequently, little attention has been given to research on pistachio diseases until recently.

Software:

Article Title: Water Stress Enhances the Progression of Branch Dieback and Almond Decline under Field Conditions
Article Snippet: .. Consensus sequences from DNA sequences generated with forward and reverse primers were obtained with the SeqMan software (DNASTART Lasergen SeqMan ® v. 7.0.0, Madison, WI, USA). ..

Article Title: Etiology of Septoria Leaf Spot of Pistachio in Southern Spain
Article Snippet: Septoria leaf spot (SLS) is the most prevalent disease of pistachio (Pistacia vera L.) in Spain.. To elucidate its etiology, 22 samples of pistachio leaves showing SLS symptoms were collected mainly from 1993 to 2018 across southern Spain.. Affected leaves from terebinth (P. terebinthus) were also collected for comparative purposes.

Article Title: Vascular Fungi Associated with Branch Dieback of Olive in Super-High-Density Systems in Southern Spain
Article Snippet: 1 1 Vascular Fungi Associated with Branch Dieback of Olive in Super2 High-Density Systems in Southern Spain 3 Carlos Agustí-Brisach, José Pablo Jiménez-Urbano, María C. Raya, Ana López4 Moral, and Antonio Trapero†, 5 Departamento de Agronomía, ETSIAM, Universidad de Córdoba, Campus de 6 Rabanales, Edif.. C4, 14071 Córdoba, Spain.. 7 †Corresponding author: A. Trapero; E-mail: trapero@uco.es 8 Funding: This research was funded by the Spanish Ministry of Science, Innovation and 9 Universities (MICINN; project AGL2016-76240-R), co-financed by the European 10 Regional Development Fund (ERDF), European Union.

Article Title: Diversity of Cellulolytic Microorganisms Associated with the Subterranean Termite Reticulitermes grassei
Article Snippet: .. For each isolate and locus (Fungi: ITS, TUB, and LSU; Bacteria: 16S rDNA), the consensus sequence (from sequences’ forward and reverse primer) was obtained in a single FASTA file format, using SeqMan software (DNASTART Lasergen SeqMan ® v. 7.0.0, Madison, WI, USA). ..

Article Title: Aetiology of branch dieback, panicle and shoot blight of pistachio associated with fungal trunk pathogens in southern Spain
Article Snippet: Pistachio represents an emerging nut crop across the Mediterranean basin.. In Spain, pistachio has been traditionally cultivated in marginal-dry areas with unfavourable climatic conditions for plant diseases.. Consequently, little attention has been given to research on pistachio diseases until recently.

Sequencing:

Article Title: Generation of rescued Japanese encephalitis virus genotype 1 from infectious full-size clone using reverse genetics
Article Snippet: .. Multiple sequence alignments of the gene encoding nonstructural protein 2 (NS2) in the JEV sequence available in GenBank were performed using the SeqMan program (Lasergen, Inc.), and conserved regions were identified. .. Primers specific to the target region were designed and synthesized by Macrogen Inc. Information on the primers and their amplicon sizes are shown in .

Article Title: Diversity of Cellulolytic Microorganisms Associated with the Subterranean Termite Reticulitermes grassei
Article Snippet: .. For each isolate and locus (Fungi: ITS, TUB, and LSU; Bacteria: 16S rDNA), the consensus sequence (from sequences’ forward and reverse primer) was obtained in a single FASTA file format, using SeqMan software (DNASTART Lasergen SeqMan ® v. 7.0.0, Madison, WI, USA). ..

Article Title: RNA-guided systems for probing and mapping of nucleic acids
Article Snippet: .. Depending on the primers used, the imaging set up and whether temperature control is available, either SOLID chemistry, CycLic chemistry, SBL chemistry or a sequencing by synthesis chemistry such as Illumina sequencing or Lasergen sequencing is applied for incorporation of nucleotides and cleavage of labels and terminators. ..

other:

Article Title: Diversity of Colletotrichum Species Associated with Olive Anthracnose Worldwide
Article Snippet: Generated sequences were assembled and edited using the software SeqMan ® v. 7.0.0. (DNASTART LaserGen, Madison, WI, USA).

Bacteria:

Article Title: Diversity of Cellulolytic Microorganisms Associated with the Subterranean Termite Reticulitermes grassei
Article Snippet: .. For each isolate and locus (Fungi: ITS, TUB, and LSU; Bacteria: 16S rDNA), the consensus sequence (from sequences’ forward and reverse primer) was obtained in a single FASTA file format, using SeqMan software (DNASTART Lasergen SeqMan ® v. 7.0.0, Madison, WI, USA). ..

Imaging:

Article Title: RNA-guided systems for probing and mapping of nucleic acids
Article Snippet: .. Depending on the primers used, the imaging set up and whether temperature control is available, either SOLID chemistry, CycLic chemistry, SBL chemistry or a sequencing by synthesis chemistry such as Illumina sequencing or Lasergen sequencing is applied for incorporation of nucleotides and cleavage of labels and terminators. ..

Control:

Article Title: RNA-guided systems for probing and mapping of nucleic acids
Article Snippet: .. Depending on the primers used, the imaging set up and whether temperature control is available, either SOLID chemistry, CycLic chemistry, SBL chemistry or a sequencing by synthesis chemistry such as Illumina sequencing or Lasergen sequencing is applied for incorporation of nucleotides and cleavage of labels and terminators. ..



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Image Search Results


Table of Materials

Journal: Journal of visualized experiments : JoVE

Article Title: Defining Gene Functions in Tumorigenesis by Ex Vivo Ablation of Floxed Alleles in Malignant Peripheral Nerve Sheath Tumor Cells

doi: 10.3791/62740

Figure Lengend Snippet: Table of Materials

Article Snippet: For the bioluminescence (MTT) assays, perform the assay exactly as outlined in the manufacturer’s instructions every 24 h for 72 h using a luminometer plate reader. table ft1 table-wrap mode="anchored" t5 caption a7 Name of Material/ Equipment Company Catalog Number Comments Ad5CMV-eGFP Gene Transfer Vector Core, Univ of Iowa VVC-U of Iowa-4 Ad5CMVCre-eGFP Gene Transfer Vector Core, Univ of Iowa VVC-U of Iowa-1174 alexa 568 secondary antibody Thermo/Fisher GαR A11036 Bioconductor Open Source Software for Bioninformatics Bioconductor http://www.bioconductor.org alternative statistical analysis tool used for step 4.4 CD31 Abcam ab28364 Celigo Image Cytometer Nexcelom Bioscience N/A Cell Stripper Corning 25-056-Cl mixture of chelators DAB staining kit Vector Labs MP-7800 DAVID ( D atabase for A nnotation, V isualization, and I ntegrated D iscovery) DAVID https://david.ncifcrf.gov functional enrichment analysis software used for step 4.5 DMEM Corning 15-013-Cl DreamTaq and Buffer (Genotyping PCR) Thermo/Fisher EP0701 and K1072 erbB4 antibodies Santa Cruz sc-284 erbB4 antibodies Abcam ab35374 erbB4 antibodies Millipore HFR1: 05-1133 FACS Sorter BD Biosciences Aria II Forskolin Sigma F6886 GenomeSpace Tools and Data Sources GenomeSpace https://genomespace.org/support/tools/ general resource for several types of open source bioinformatic tools for step 4.5 Glutamine Corning 25-005-Cl Gorilla G ene Ontology en RI chment ana L ysis and visua L iz A tion tool Gorilla N/A, http://cbl-gorilla.cs.technion.ac.il functional enrichment analysis software used for step 4.5 GSEA Gene Set Enrichment Analysis Broad Institute N/A, https://www.gsea-msigdb.org/gsea/index.jsp functional enrichment analysis software used for step 4.5 HSD: Athymic Nude-FOxn1nu mice Envigo (Previously Harlan Labs) 69 Illumina HiSeq2500 (next generation DNA sequencer) Illumina Hi Seq 2500 DNA sequencer used for step 4.2 Lasergene: ArrayStar Gene expression and variant analysis DNAStar LaserGene software N/A software statistical and normalization analysis used for step 4.4 Lasergene: SeqMan NGen sequence alignment assembly software alignment used for step 4.3 N/A software alignment used for step 4.3 Matrigel, low growth factor basement membrane matrix Corning 354230 NRG1-beta In house Generated by SLC, also commercially available from R & D Systems(396-HB-050/CF).

Techniques: Plasmid Preparation, Software, Cytometry, Staining, Functional Assay, Expressing, Variant Assay, Sequencing, Generated, Viability Assay, Amplification