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image analysis software zen 3 13 (Carl Zeiss)

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Carl Zeiss image analysis software zen 3 13
Image Analysis Software Zen 3 13, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 95/100, based on 188 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/image+analysis+software/ZEN+Module+Image+Analysis/pm42767265-63-12-17
Average 95 stars, based on 188 article reviews

image analysis software zen 3 13 - by Bioz Stars, 2026-10

95/100 stars

Images

Fluorescence:

Article Title: Systems analysis reveals alternate metabolic states adopted by Mycobacterium tuberculosis across species
Article Snippet: .. Both plates and chamber slides were imaged using confocal fluorescence microscopy using the Cell Discoverer 7 microscope (Zeiss) and the modular image acquisition software ZEN (Zeiss). ..

Microscopy:

Article Title: Impact of Mutations in the NCAPG and MSTN Genes on Body Composition, Structural Properties of Skeletal Muscle, Its Fatty Acid Composition, and Meat Quality of Bulls from a Charolais × Holstein F 2 Cross.
Article Snippet: .. A minimum of 300 muscle fibers per animal was measured using an image analysis system equipped with a Jenaval microscope (Carl Zeiss, Jena, Germany), an Altra20 CCD camera (OSIS, Münster, Germany), and the muscle fiber measurement module developed by MAS (Freiburg, Germany) in the Cellˆ software (OSIS). ..

Article Title: Impact of Mutations in the NCAPG and MSTN Genes on Body Composition, Structural Properties of Skeletal Muscle, Its Fatty Acid Composition, and Meat Quality of Bulls from a Charolais × Holstein F 2 Cross
Article Snippet: .. A minimum of 300 muscle fibers per animal was measured using an image analysis system equipped with a Jenaval microscope (Carl Zeiss, Jena, Germany), an Altra20 CCD camera (OSIS, Münster, Germany), and the muscle fiber measurement module developed by MAS (Freiburg, Germany) in the Cell^ software (OSIS). ..

Software:

Article Title: ACL injury reprograms quadriceps myonuclear epigenetic and transcriptional signatures in mice
Article Snippet: Immunofluorescence was visualized at 10 × or 20 × magnification (Plan-Apochromat 10x, NA: 0.45, air; Plan-Apochromat 20x, NA: 0.8, air) using a Zeiss M2 Axioimager with an automatic stage (Zeiss, Oberkochen, Germany). .. Image analysis for EU intensity and RNA-FISH was performed by a single assessor (TC or SGV) using Zeiss Zen software (v3.1), blinded to group allocation and injury status of the muscle. ..

Article Title: Photobiomodulation Triggers M1/M2 Macrophage Polarization in Zymosan-Induced Acute Arthritis in Mice.
Article Snippet: Objective: To investigate whether photobiomodulation (PBM) modulates macrophage polarization in zymosaninduced acute joint inflammation, promoting an M1 to M2 phenotype shift.. Methods: Mice received intraarticular zymosan and PBM (830 nm, 10 mW) at 3 and 30 J/cm2.. Euthanasia occurred at 24, 48, and 72 h. Polarization was assessed via mRNA levels and protein expression.

Article Title: Impact of Mutations in the NCAPG and MSTN Genes on Body Composition, Structural Properties of Skeletal Muscle, Its Fatty Acid Composition, and Meat Quality of Bulls from a Charolais × Holstein F 2 Cross
Article Snippet: .. A minimum of 300 muscle fibers per animal was measured using an image analysis system equipped with a Jenaval microscope (Carl Zeiss, Jena, Germany), an Altra20 CCD camera (OSIS, Münster, Germany), and the muscle fiber measurement module developed by MAS (Freiburg, Germany) in the Cell^ software (OSIS). ..

Article Title: Reversing uL3-mediated chemoresistance through synergistic combination of 5-FU and G-quadruplex ligands
Article Snippet: .. Subsequently, G4 foci and mitochondria were segmented, and their quantities and co-localization were quantified using the Image Analysis module of ZEISS ZEN Blue 3.1 software. ..

Analysis:

Article Title: The endo-lysosomal system drives lumen formation in a human epiblast model.
Article Snippet: Surface rendering feature in Imaris (Oxford Instruments) was used to generate 3D surfaces (1.0μm surface level) and to measure lumenal sphericity in Fig. 10E. .. Lumenal circularity and roundness in Fig. 10F, G were measured from all optical sections with an open central lumen labeled by PODXL using Image Analysis module in ZEN (Zeiss). ..

Labeling:

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$Physical attributes of naturally aged mice were enhanced following mGFD‐CD3 treatment. (A) Maximal walking speed, treadmill endurance, hanging endurance, and grip strength of naturally aged mice treated with mCD3 or mGFD‐CD3 were recorded at 6 months after the first infusion ( n = 5 mice per condition). (B) H&E staining of gastrocnemius collected from mice treated with mCD3 or mGFD‐CD3, sampled 6 months after the first infusion. Scale bar, 50 μm. Relative cell areas in the gastrocnemius were quantified using Image J ( n = 5 mice per condition). (C) Representative micro‐CT images of the distal femurs of the mice treated with mCD3 or mGFD‐CD3 at 6 months after the first infusion. The relative bone volume fraction (BV/TV) of cancellous bone in the distal femur was quantified for each sample and analyzed by Imaris image analysis software ( n = 5 mice per condition). (D) The percentages of total lean mass and total adipose mass and the adipose mass/lean mass ratio of naturally aged mice treated with mCD3 or mGFD‐CD3 6 months after the first infusion were recorded using InAlyzer software ( n = 5 mice per condition). (E) (left) Micro‐CT images of SAT and bone of the naturally aged mice treated with mCD3 or mGFD‐CD3 were recorded 6 months after the first infusion. Green, SAT; red, bone. (right) Quantification of the adipose tissue of mice based on the micro‐CT images ( left ). Data were normalized to mouse body weight ( n = 5 mice per condition). (F) Basal glucose levels after 12 h of starvation in mice treated with mCD3 or mGFD‐CD3 at 6 months after the first infusion ( n = 5 mice per condition). (G) ( upper ) Levels of glucose before (0 min) and after the intraperitoneal administration of glucose (2 g per kg body weight) (samples as per in (f)). ( lower ) Area under the curve (AUC) for the results from (g) ( n = 5 mice per condition). The mouse experiments are representative results from two independent experiments. Data are presented as mean ± SD and analyzed by one‐way ANOVA followed by Tukey's multiple comparisons test (A–G). * p ≤ 0.05; ** p ≤ 0.01.$

Journal: Aging Cell

Article Title: uPAR ‐Targeting T Cell Engager Exerts Senolytic Effects in Mice and Non‐Human Primates With Serum Aminotransferase Activity as a Safety Monitor

doi: 10.1111/acel.70742

Figure Lengend Snippet: Physical attributes of naturally aged mice were enhanced following mGFD‐CD3 treatment. (A) Maximal walking speed, treadmill endurance, hanging endurance, and grip strength of naturally aged mice treated with mCD3 or mGFD‐CD3 were recorded at 6 months after the first infusion ( n = 5 mice per condition). (B) H&E staining of gastrocnemius collected from mice treated with mCD3 or mGFD‐CD3, sampled 6 months after the first infusion. Scale bar, 50 μm. Relative cell areas in the gastrocnemius were quantified using Image J ( n = 5 mice per condition). (C) Representative micro‐CT images of the distal femurs of the mice treated with mCD3 or mGFD‐CD3 at 6 months after the first infusion. The relative bone volume fraction (BV/TV) of cancellous bone in the distal femur was quantified for each sample and analyzed by Imaris image analysis software ( n = 5 mice per condition). (D) The percentages of total lean mass and total adipose mass and the adipose mass/lean mass ratio of naturally aged mice treated with mCD3 or mGFD‐CD3 6 months after the first infusion were recorded using InAlyzer software ( n = 5 mice per condition). (E) (left) Micro‐CT images of SAT and bone of the naturally aged mice treated with mCD3 or mGFD‐CD3 were recorded 6 months after the first infusion. Green, SAT; red, bone. (right) Quantification of the adipose tissue of mice based on the micro‐CT images ( left ). Data were normalized to mouse body weight ( n = 5 mice per condition). (F) Basal glucose levels after 12 h of starvation in mice treated with mCD3 or mGFD‐CD3 at 6 months after the first infusion ( n = 5 mice per condition). (G) ( upper ) Levels of glucose before (0 min) and after the intraperitoneal administration of glucose (2 g per kg body weight) (samples as per in (f)). ( lower ) Area under the curve (AUC) for the results from (g) ( n = 5 mice per condition). The mouse experiments are representative results from two independent experiments. Data are presented as mean ± SD and analyzed by one‐way ANOVA followed by Tukey's multiple comparisons test (A–G). * p ≤ 0.05; ** p ≤ 0.01.

Article Snippet: 3D image analysis was performed with Imaris image analysis software (version 10.1.0).

Techniques: Staining, Micro-CT, Analysis, Software, Tissue