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illumina iscan microarray scanner  (Illumina Inc)


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    Structured Review

    Illumina Inc illumina iscan microarray scanner
    Illumina Iscan Microarray Scanner, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 97/100, based on 1703 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/high+microarray+scanner/iScan+System/pm26152361-250-54-54
    Average 97 stars, based on 1703 article reviews
    illumina iscan microarray scanner - by Bioz Stars, 2026-09
    97/100 stars

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    Related Articles

    other:

    Article Title: DNA methylation profiling in central nervous system tumors: Where do we draw the line of clinical utility?
    Article Snippet: The main cost lies in the scanner/platform ( e.g. , refurbished Illumina iScan system with additional computing cost.

    Imaging:

    Article Title: Small Genome-wide association study of insect bite hypersensitivity in Hucul horses.
    Article Snippet: Background: Insect bite hypersensitivity (IBH) is a prevalent allergic skin disease in horses that significantly affects animal welfare and shows evidence of genetic predisposition.. Aims/objectives: Understanding the genetic basis of IBH can improve management and breeding strategies.. The Equine80K BeadChip microarray was used to identify genomic regions associated with the occurrence of IBH in Hucul horses.

    Methylation:

    Article Title: Dectin-1 epigenetic reprogramming rescues senescent-like Treg function in allergic asthma
    Article Snippet: Methylation profiling was performed using the Illumina Infinium HumanMethylation450K BeadChip, which targets ∼485,000 CpG sites across the genome. .. Arrays were scanned on Illumina iScan System, and data were processed using GenomeStudio Methylation Module (v1.9.0; Illumina). ..

    Article Title: Differential DNAm-GDF15 and mitochondrial profile in lean MAFLD.
    Article Snippet: Afterward, 4 μL of the bisulfite-converted DNA were processed through Illumina’s Infinium HD Methylation protocol, encompassing overnight denaturation and amplification (lasting 20 to 24 h), followed by fragmentation, precipitation, resuspension, and hybridization to the EPIC BeadChip v1.0 (also lasting 16 to 24 h). .. The BeadChips were washed, labeled, and then scanned using the Illumina iScan system to generate the methylation data. ..

    Article Title: Significance of LEF1, ROR2, Cyclin D1, and DNA Methylation Profiling in the Molecular Classification and Prognosis Prediction of Pediatric Medulloblastoma
    Article Snippet: .. Samples were loaded onto MethylationEPIC BeadChips and scanned using the Illumina iScan system to assess genome-wide methylation profiles. ..

    Article Title: Differential DNAm-GDF15 and mitochondrial profile in lean MAFLD
    Article Snippet: Afterward, 4 μL of the bisulfite-converted DNA were processed through Illumina’s Infinium HD Methylation protocol, encompassing overnight denaturation and amplification (lasting 20 to 24 h), followed by fragmentation, precipitation, resuspension, and hybridization to the EPIC BeadChip v1.0 (also lasting 16 to 24 h). .. The BeadChips were washed, labeled, and then scanned using the Illumina iScan system to generate the methylation data. ..

    Labeling:

    Article Title: Differential DNAm-GDF15 and mitochondrial profile in lean MAFLD.
    Article Snippet: Afterward, 4 μL of the bisulfite-converted DNA were processed through Illumina’s Infinium HD Methylation protocol, encompassing overnight denaturation and amplification (lasting 20 to 24 h), followed by fragmentation, precipitation, resuspension, and hybridization to the EPIC BeadChip v1.0 (also lasting 16 to 24 h). .. The BeadChips were washed, labeled, and then scanned using the Illumina iScan system to generate the methylation data. ..

    Article Title: Differential DNAm-GDF15 and mitochondrial profile in lean MAFLD
    Article Snippet: Afterward, 4 μL of the bisulfite-converted DNA were processed through Illumina’s Infinium HD Methylation protocol, encompassing overnight denaturation and amplification (lasting 20 to 24 h), followed by fragmentation, precipitation, resuspension, and hybridization to the EPIC BeadChip v1.0 (also lasting 16 to 24 h). .. The BeadChips were washed, labeled, and then scanned using the Illumina iScan system to generate the methylation data. ..

    Genome Wide:

    Article Title: Significance of LEF1, ROR2, Cyclin D1, and DNA Methylation Profiling in the Molecular Classification and Prognosis Prediction of Pediatric Medulloblastoma
    Article Snippet: .. Samples were loaded onto MethylationEPIC BeadChips and scanned using the Illumina iScan system to assess genome-wide methylation profiles. ..



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    Image Search Results


    Flow chart of microarray data analysis. The agilent single color microarray platform was used having more than 58,000 transcripts and further data processing was done using agilent GeneSpring software followed by pathway analysis using GSEA database. Numbers in parentheses illustrates number of pathways enriched in each category using GSEA database. DEGs-Differentially expressed genes, ANOVA-Analysis of variance, BP-Biological pathway, CC-Cellular component, MF-Molecular function.

    Journal: bioRxiv

    Article Title: Synovial fluid transcriptome dynamics in osteoarthritis progression: Implications in pathogenesis

    doi: 10.1101/2024.06.24.600143

    Figure Lengend Snippet: Flow chart of microarray data analysis. The agilent single color microarray platform was used having more than 58,000 transcripts and further data processing was done using agilent GeneSpring software followed by pathway analysis using GSEA database. Numbers in parentheses illustrates number of pathways enriched in each category using GSEA database. DEGs-Differentially expressed genes, ANOVA-Analysis of variance, BP-Biological pathway, CC-Cellular component, MF-Molecular function.

    Article Snippet: Following hybridization, the array slides were washed and scanned with an Agilent SureScan High-Resolution DNA Microarray Scanner.

    Techniques: Microarray, Software

    The 11 genes were detected in the microarray analysis and in the human dataset. A correlation between FCs of genes. B heatmap with hierarchical clustering of FCs of the 11 genes commonly detected in the murine neurospheres and AD patients’ tissues

    Journal: Cell & Bioscience

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations

    doi: 10.1186/s13578-024-01251-3

    Figure Lengend Snippet: The 11 genes were detected in the microarray analysis and in the human dataset. A correlation between FCs of genes. B heatmap with hierarchical clustering of FCs of the 11 genes commonly detected in the murine neurospheres and AD patients’ tissues

    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Techniques: Microarray