Review



microarray snp genotype data  (Illumina Inc)


Bioz Verified Symbol Illumina Inc is a verified supplier  
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
  • 90

    Structured Review

    Illumina Inc microarray snp genotype data
    Microarray Snp Genotype Data, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/snp+microarray+data/snp+genotypes/pm40563917-118-13-18
    Average 90 stars, based on 1 article reviews
    microarray snp genotype data - by Bioz Stars, 2026-09
    90/100 stars

    Images

    Related Articles

    Microarray:

    Article Title: Excess of rare, inherited truncating mutations in autism
    Article Snippet: .. In addition, we compared SNPs from exome calls with SNP calls from existing Illumina SNP microarray data (Sanders personal communication) and found the median genotype-level concordance to be 99.4% (for a median of 17,731 overlapping SNPs in 3,052 offspring in 1,796 families for which microarray data was available). ..

    Article Title: Excess of rare, inherited truncating mutations in autism
    Article Snippet: .. In addition, we compared SNPs from exome calls with SNP calls from existing Illumina single nucleotide polymorphism (SNP) microarray data (Sanders personal communication) and found the median genotype-level concordance to be 99.4% (for a median of 17,731 overlapping SNPs in 3,052 offspring in 1,796 families for which microarray data was available). ..

    Article Title: Excess of rare, inherited truncating mutations in autism
    Article Snippet: .. Finally, to ensure we did not have any sample, family or data mix-ups, we used a custom-developed (Sanders, personal communication) tool to identify and match 287 polymorphic SNPs in each exome to an existing database of “SNP fingerprints” derived from Illumina SNP microarray data and 96 SNP fingerprints collected by the Rutgers sample distribution center. ..

    Article Title: The new sequencer on the block: comparison of Life Technology's Proton sequencer to an Illumina HiSeq for whole-exome sequencing.
    Article Snippet: .. Comparison to SNP microarray genotype data SNP genotypes were available for more than 4 million loci for the parents of the trio, NA12889 and NA12890, based on a set of Illumina-series SNP microarray data generated as a part of the DCEG Imputation Reference Set (Wang et al. 2012). .. A total of 21,078 and 32,382 variants overlapped with the SNP genotypes for the Proton and Illumina WES data, respectively.

    Article Title: De novo rates and selection of large copy number variation
    Article Snippet: Illumina Hap550 genotyping data used for this purpose consisted of lymphoblastoid cell line DNA from 671 neurologically normal Caucasian controls from a study of Parkinson's disease (dbGaP accession no. phs000089; Simon-Sanchez et al. 2007 ) and peripheral blood DNA from 699 individuals of European ancestry from the InCHIANTI study of aging ( http://www.inchiantistudy.net ; Melzer et al. 2008 ). .. CNV discovery Discovery of de novo CNVs was carried out as an extension of a previously validated method that identifies CNVs from Illumina SNP microarray data ( Itsara et al. 2009 ). .. Illumina GenomeStudio software was used to generate two summary quantities for each SNP: the LogR ratio, representing the total signal intensity, and the BAF, representing the allelic balance.

    Article Title: The new sequencer on the block: comparison of Life Technology’s Proton sequencer to an Illumina HiSeq for whole-exome sequencing
    Article Snippet: .. SNP genotypes were available for more than 4 million loci for the parents of the trio, NA12889 and NA12890, based on a set of Illumina-series SNP microarray data generated as a part of the DCEG Imputation Reference Set ( Wang et al. 2012 ). .. A total of 21,078 and 32,382 variants overlapped with the SNP genotypes for the Proton and Illumina WES data, respectively.

    Derivative Assay:

    Article Title: Excess of rare, inherited truncating mutations in autism
    Article Snippet: .. Finally, to ensure we did not have any sample, family or data mix-ups, we used a custom-developed (Sanders, personal communication) tool to identify and match 287 polymorphic SNPs in each exome to an existing database of “SNP fingerprints” derived from Illumina SNP microarray data and 96 SNP fingerprints collected by the Rutgers sample distribution center. ..

    Comparison:

    Article Title: The new sequencer on the block: comparison of Life Technology's Proton sequencer to an Illumina HiSeq for whole-exome sequencing.
    Article Snippet: .. Comparison to SNP microarray genotype data SNP genotypes were available for more than 4 million loci for the parents of the trio, NA12889 and NA12890, based on a set of Illumina-series SNP microarray data generated as a part of the DCEG Imputation Reference Set (Wang et al. 2012). .. A total of 21,078 and 32,382 variants overlapped with the SNP genotypes for the Proton and Illumina WES data, respectively.

    Generated:

    Article Title: The new sequencer on the block: comparison of Life Technology's Proton sequencer to an Illumina HiSeq for whole-exome sequencing.
    Article Snippet: .. Comparison to SNP microarray genotype data SNP genotypes were available for more than 4 million loci for the parents of the trio, NA12889 and NA12890, based on a set of Illumina-series SNP microarray data generated as a part of the DCEG Imputation Reference Set (Wang et al. 2012). .. A total of 21,078 and 32,382 variants overlapped with the SNP genotypes for the Proton and Illumina WES data, respectively.

    Article Title: The new sequencer on the block: comparison of Life Technology’s Proton sequencer to an Illumina HiSeq for whole-exome sequencing
    Article Snippet: .. SNP genotypes were available for more than 4 million loci for the parents of the trio, NA12889 and NA12890, based on a set of Illumina-series SNP microarray data generated as a part of the DCEG Imputation Reference Set ( Wang et al. 2012 ). .. A total of 21,078 and 32,382 variants overlapped with the SNP genotypes for the Proton and Illumina WES data, respectively.



    Similar Products

    86
    Jingxin Pharmaceutical Co Ltd snp microarray data
    Snp Microarray Data, supplied by Jingxin Pharmaceutical Co Ltd, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/snp+microarray+data/data+microarray+snp/pm41548397-144-22-18
    Average 86 stars, based on 1 article reviews
    snp microarray data - by Bioz Stars, 2026-09
    86/100 stars
      Buy from Supplier

    90
    Illumina Inc microarray snp genotype data
    Microarray Snp Genotype Data, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/snp+microarray+data/snp+genotypes/pm40563917-118-13-18
    Average 90 stars, based on 1 article reviews
    microarray snp genotype data - by Bioz Stars, 2026-09
    90/100 stars
      Buy from Supplier

    90
    Illumina Inc immunochip microarray snp data
    Immunochip Microarray Snp Data, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/snp+microarray+data/illumina+immunochip/pmc09893534__13040_2023_321_MOESM1_ESM-20-2-12
    Average 90 stars, based on 1 article reviews
    immunochip microarray snp data - by Bioz Stars, 2026-09
    90/100 stars
      Buy from Supplier

    90
    Partners HealthCare System Inc snp microarray data
    Summary of major studies associating L-CH with lymphoid malignancy.
    Snp Microarray Data, supplied by Partners HealthCare System Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/snp+microarray+data/snp+microarray+data/pmc09813350-12-57-70
    Average 90 stars, based on 1 article reviews
    snp microarray data - by Bioz Stars, 2026-09
    90/100 stars
      Buy from Supplier

    90
    Thermo Fisher snp 6.0 microarray data
    Summary of major studies associating L-CH with lymphoid malignancy.
    Snp 6.0 Microarray Data, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/snp+microarray+data/pmc08908645-46-2-1
    Average 90 stars, based on 1 article reviews
    snp 6.0 microarray data - by Bioz Stars, 2026-09
    90/100 stars
      Buy from Supplier

    86
    Thermo Fisher snp 6 0 microarray data
    Summary of major studies associating L-CH with lymphoid malignancy.
    Snp 6 0 Microarray Data, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/snp+microarray+data/pm32759987-52-2-1
    Average 86 stars, based on 1 article reviews
    snp 6 0 microarray data - by Bioz Stars, 2026-09
    86/100 stars
      Buy from Supplier

    Image Search Results


    Summary of major studies associating L-CH with lymphoid malignancy.

    Journal: Blood Cancer Journal

    Article Title: Lymphoid clonal hematopoiesis: implications for malignancy, immunity, and treatment

    doi: 10.1038/s41408-022-00773-8

    Figure Lengend Snippet: Summary of major studies associating L-CH with lymphoid malignancy.

    Article Snippet: Niroula et al. (2021) , Detection of SNVs/indels in WES data at 56 M-CH related genes and 235 genes recurrently mutated in lymphoid malignancy (VAF > 2%). mCAs were previously detected in a prior study. CH and mCAs were excluded if they were detected less than 6 months before a hematologic malignancy diagnosis. , 420,969 individuals with SNP microarray data and 55,383 individuals with WES from the UK Biobank and Mass General Brigham Biobank , CHIP occurs at both M-CHIP/M-mCA and L-CHIP/L-mCA loci and increases with age. M-CH and L-CH loci clearly segregate on the incidence myeloid and lymphoid malignancy. M-CHIP is dominated by DNMT3A, TET2, and ASXL1 somatic mutants, while L-CHIP is spread more evenly across a large number of genes. CLL was the dominant lymphoid malignancy occurring subsequent to L-CH. , [ ] .

    Techniques: Genome Wide, Sequencing, Mutagenesis, Clone Assay, Biomarker Discovery, Microarray, DNA Sequencing, Clinical Proteomics