s961 acetate (MedChemExpress)
Structured Review

S961 Acetate, supplied by MedChemExpress, used in various techniques. Bioz Stars score: 93/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/s961 acetate/product/MedChemExpress
Average 93 stars, based on 8 article reviews
Images
1) Product Images from "Structural basis of insulin receptor antagonism by bivalent site 1-site 2 ligands"
Article Title: Structural basis of insulin receptor antagonism by bivalent site 1-site 2 ligands
Journal: bioRxiv
doi: 10.1101/2025.08.23.671589
Figure Legend Snippet: (a-b) Cartoon of (a) the apo/inactive FL-IR illustrating the physical separation of the TK domains, and (b) the insulin-bound/active FL-IR showing dimerization of the TK domains. Cartoon generated using PDBs: 6PXV, 4ZXB, Alphafold3 , and BioRender.com. The ectodomain (ECD) is boxed in (a-b). (c) Domain organization and disulfide linkages of FL-IR drawn to scale using illustrator of biological sequences . The α and β chains are indicated and both protomers are shown. (d) Structure of the apo IR ECD in the inverted-V conformation (PDB: 4ZXB). (e) Structure of the IR showing only the ECD bound to one site 1 insulin in an asymmetric, active conformation (PDB: 7STI). (f) Structure of the IR showing only the ECD bound to four insulin molecules in the activated T-shape conformation (PDB: 6PXV). (g) Structure of the IR showing only the ECD bound to two S597 molecules (PDB: 8DTL), where IR adopts a variation of the active T shape conformation. For structures shown in panels (d-g), one IR protomer is shown in grey and the other color coded by domain according to the color scheme shown in panel (c): leucine-rich 1 domain (L1, light blue), cysteine-rich domain (CR, red), leucine-rich 2 domain (L2, green), fibronectin type-III 1 domain (FnIII-1, dark purple), fibronectin type-III 2 domain (FnIII-2, coral), alpha C-terminal helix (αCT, pink), insert domain (ID, pink), and fibronectin type-III 3 domain (FnIII-3, dark blue). (h) Sequences of human insulin and IR ligands used in this study with site 1- and site 2-binding segments indicated. Human insulin A and B chains are colored magenta and gold, respectively. S597 and S961 site 1 and site 2 segments are shown in purple and salmon, respectively. The S961 flexible linker is shown in grey. The Ins-AC-S2 A chain contains binding segments for site 1 and site 2 (colored in magenta and salmon, respectively), with the linker shown in grey. The Ins-AC-S2 B chain is shown in gold. Disulfide bonds are indicated.
Techniques Used: Generated, Binding Assay
Figure Legend Snippet: (a-b) Cryo-EM density map determined to 3.68 Å from 378,182 particles showing (a) front view and (b) top view of the receptor. Protomers 1 and 2 are colored in dark and light blue, respectively. The density for S961 site 1- and site 2-binding segments are colored in purple and salmon, respectively, and the linker density is shown in grey. The region with missing density corresponding to the FnIII-3 domain of protomer 2 is circled. (c) Model of the IR/S961 complex showing the separation distance of the fibronectin stalks (distance measured from L909 to L909’ on the opposite protomer). (d-f) Representative map and model of (d) S961 site 1 helix, (e) β-strand from L1 belonging to IR site 1, and (f) S961 site 2 helix. (g-h) Side views of IR/S961 density map and model from (a) showing (g) the better reconstructed, and (h) the less well reconstructed receptor halves with contour levels adjusted to see S961 at both sets of binding sites. Zoomed in views of the map and model overlayed at both sets of binding sites are shown with binding sites labeled.
Techniques Used: Cryo-EM Sample Prep, Binding Assay, Labeling
Figure Legend Snippet: (a) IR/S961 model showing the site 1 helix overlayed with S519C16 (site 1 component, grey, PDB: 5J3H) and S597 (white, PDB: 8DTL) aligned to L1. (b) IR/S961 model showing the site 2 helix overlayed with isolated site 2 peptide (tan, PDB: 8DTM) and S597 (grey, PDB: 8DTL) aligned to FnIII-1. (c) Side view showing half of the IR/S961 complex (color) overlayed with apo IR (white, PDB: 4ZXB). (d) Published structure of the IR/S597 complex (PDB: 8DTL). (e-f) Side view showing one half of (e) the IR/S961 complex and (f) the IR/S597 complex highlighting the N- to C-terminal orientation of S961 and S597 with arrows. Site 1 and site 2 are labeled in purple and salmon, respectively.
Techniques Used: Isolation, Labeling
Figure Legend Snippet: (a) Overlay of density maps obtained from the two most different subsets of particles obtained by 3DVA shown in tan and steel blue. The dynamic receptor arm containing site 1 is boxed. (b-c) Zoomed in view of S961 at site 1 and site 2 fit into the density maps shown in (a). (b) Map showing strong density for S961 at site 1 determined to 3.99 Å resolution from 343,705 particles. (c) Map showing weak density for S961 at site 1 determined to 3.97 Å from 386,871 particles. Site 1 and site 2 helices of S961 are labeled. (d) IR/S961 site 1 helix overlayed with apo IR aCT (white, PDB: 4ZXB) showing sidechains pointed towards the L1 domain and aligned to the L1 domain.
Techniques Used: Labeling



