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Sequenom oncocarta v.1 massarray system
Oncocarta V.1 Massarray System, supplied by Sequenom, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/massarray-system-1/massarray+oncocarta+mutation+profiler+panel/pm20815376-108-8-12
Average 90 stars, based on 1 article reviews
oncocarta v.1 massarray system - by Bioz Stars, 2026-10
90/100 stars

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Related Articles

other:

Article Title: Custom genotyping for substance addiction susceptibility genes in Jordanians of Arab descent
Article Snippet: Briefly, PCR and single base extension primers (SBE) were designed using MassARRAY assay design 3.1 software (Sequenom MassARRAY system) that allows iPLEX reactions for SBE designs with the modified masses associated with the termination mix.

Article Title: DNA hypermethylation does not negatively impact the transcription of the TNF-α gene in an acute T-cell leukemia.
Article Snippet: Aims: To better understand the roles of DNA methylation and histone acetylation in the transcription of the TNF-α gene (TNFA) in leukemic T cells.. Materials & methods: Methylation levels of cytosine-guanosine dinucleotides (CPGs) were assessed by mass spectrometry.. The influence of epigenetic modifiers on DNA methylation and TNFA transcription was also determined.

Article Title: Genetic polymorphisms in plasminogen activator inhibitor-1 predict susceptibility to steroid-induced osteonecrosis of the femoral head in Chinese population
Article Snippet: Two SNPs (rs11178 and rs2227631) within PAI-1 were genotyped using Sequenom MassARRAY system.

Software:

Article Title: Association of CYP gene polymorphisms with breast cancer risk and prognostic factors in the Jordanian population
Article Snippet: SNPs were genotyped using Sequenom iPLEX (Sequenom, San Diego, CA, USA). .. MassARRAY assay design (version 3.1) software (Sequenom MassARRAY system) was used to design the PCR in addition to the single base extension primers (SBE) at the AGRF; Australian Genome Research Facility (AGRF) (Melbourne, Australia). .. The equation for the Hardy-Weinberg equilibrium (HWE), p 2 + 2pq + q 2 = 1 , was used for all SNPs in both groups using the Chi-square (χ 2 ) goodness of-fit test.Variations between cases and controls were calculated by employing Pearson’s chi-squared using the Statistical Package for the Social Sciences (SPSS), version 25.0 (SPSS, Inc., Chicago, IL).

Article Title: A two-stage genome-wide association study identifies novel germline genetic variations in CACNA2D3 associated with radiotherapy response in nasopharyngeal carcinoma.
Article Snippet: .. For samples in the validation stage 1, genotyping was performed using the Sequenom MassARRAY system, and genotyping data were obtained using TYPER 4.0 software. ..

Polymerase Chain Reaction:

Article Title: Association of CYP gene polymorphisms with breast cancer risk and prognostic factors in the Jordanian population
Article Snippet: SNPs were genotyped using Sequenom iPLEX (Sequenom, San Diego, CA, USA). .. MassARRAY assay design (version 3.1) software (Sequenom MassARRAY system) was used to design the PCR in addition to the single base extension primers (SBE) at the AGRF; Australian Genome Research Facility (AGRF) (Melbourne, Australia). .. The equation for the Hardy-Weinberg equilibrium (HWE), p 2 + 2pq + q 2 = 1 , was used for all SNPs in both groups using the Chi-square (χ 2 ) goodness of-fit test.Variations between cases and controls were calculated by employing Pearson’s chi-squared using the Statistical Package for the Social Sciences (SPSS), version 25.0 (SPSS, Inc., Chicago, IL).

Sequencing:

Article Title: Molecular characterization of a long range haplotype affecting protein yield and mastitis susceptibility in Norwegian Red cattle
Article Snippet: .. The 269 SNPs identified by re-sequencing of the candidate region by Roche NimbleGen sequence capture and 454 GS-FLX sequencing were genotyped in 768 sires from paternal half-sib families using the Sequenom MassARRAY system (dataset 1). .. Genotypes were also retrieved for 84 SNPs for 2589 NRC sires from paternal half-sib families genotyped with the Affymetrix 25 k MIP array (dataset 2) and for 198 SNPs for 1092 NRC sires from paternal half-sib families genotyped with the Illumina Bovine SNP50 BeadChip (dataset 3).

Biomarker Discovery:

Article Title: A two-stage genome-wide association study identifies novel germline genetic variations in CACNA2D3 associated with radiotherapy response in nasopharyngeal carcinoma.
Article Snippet: .. For samples in the validation stage 1, genotyping was performed using the Sequenom MassARRAY system, and genotyping data were obtained using TYPER 4.0 software. ..



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