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3150009b  (fluidigm)


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    Structured Review

    fluidigm 3150009b
    3150009b, supplied by fluidigm, used in various techniques. Bioz Stars score: 93/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/3150009b/Anti-Mouse+CD24+(M1%2F69)-150Nd/pmc12903562-24-10-8
    Average 93 stars, based on 8 article reviews
    3150009b - by Bioz Stars, 2026-09
    93/100 stars

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    other:

    Article Title: Klebsiella pneumoniae hijacks the Toll-IL-1R protein SARM1 in a type I IFN-dependent manner to antagonize host immunity.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies anti-IL-1b R&D Systems Cat# AF-401-NA, RRID:AB_416684 anti-caspase-1 Cell Signaling Cat# 24232, RRID:AB_2890194 anti-AIM2 Santa Cruz Cat# sc-515895; RRID:AB_2922903 anti-NLRP3 Cell Signaling Cat# 15101; RRID:AB_2922902 anti-Gasdermin-D Cell Signaling Cat# 93709; RRID:AB_2800210 anti-Viperin Novus Biologicals Cat# NBP2-03971; RRID:AB_2922904 anti-ISG15 Cell Signaling Cat# 2743: AB_485250 anti-phospho-STAT3 Cell Signaling Cat# 9145; RRID:AB_2799407 anti-IkBa Cell Signaling Cat# 4814; RRID:AB_2797687 anti-phospho-IkBa Cell Signaling Cat# 9246; RRID:AB_2922905 anti-phospho-AKT1/2/3 Santa Cruz Cat# sc-33437; RRID:AB_2922906 anti-phospho-IKKa/b Cell Signaling Cat# 2697; RRID:AB_2922907 anti-phospho-IRF3 Cell Signaling Cat# 4947; RRID:AB_823547 anti-phospho-p-TBK-1/NAK Cell Signaling Cat# 5483; RRID:AB_2922908 anti-phospho-JNK Cell Signaling Cat# 9251S; RRID:AB_331659 anti-phospho-ERK Cell Signaling Cat# 9101; RRID:AB_331772 anti-phospho-p38 Cell Signaling Cat# 4511; RRID:AB_2797648 anti-Flag M2 Sigma-Aldrich Cat# F3165; RRID:AB_2922909 anti-HA Santa Cruz Cat# sc-805; RRID:AB_2922910 anti a-tubulin Sigma-Aldrich Cat# T9026; RRID:AB_2922911 anti-b-actin Santa Cruz Cat# sc-130065; RRID:AB_2922912 anti-ASC Santa Cruz Cat# sc-22514R; RRID:AB_2922913 anti-Lamp1 Santa Cruz Cat# sc-19992; RRID:AB_2922914 anti-Rab14 Santa Cruz Cat# sc-271401; RRID:AB_2922915 Ly6G Fluidigm Cat# 3141008B; RRID:AB_2814678 SIRPa BD Biosciences Cat# 552371; RRID: AB_394371 B220 Fluidigm Cat# 3144011B; RRID:AB_2811239 CD4 Fluidigm Cat# 3145002B; RRID:AB_2687832 F4/80 Fluidigm Cat# 3146008B; RRID:AB_2895117 CD45 Fluidigm Cat# 3147003C; RRID:AB_2811243 CD11b Fluidigm Cat# 3148003C; RRID:AB_2922916 CD19 Fluidigm Cat# 3149002B; RRID:AB_2814679 CD24 Fluidigm Cat# 3150009B; RRID:AB_2922917 CD25 Fluidigm Cat# 151007B; RRID:AB_2687835 CD3e Fluidigm Cat# 3152004B; RRID:AB_2687836 PD-L1 Fluidigm Cat# 3153016B; RRID:AB_2687837 CD103 BioLegend Cat# 121402; RRID:AB_535945 CD90.2 Fluidigm Cat# 3156006B; RRID:AB_2801433 IL-10 Fluidigm Cat# 3158002B; RRID:AB_2922918 TCRgd Fluidigm Cat# 3159012B; RRID:AB_2922919 CD62L Fluidigm Cat# 3160008C; RRID:AB_2885021 iNOS Fluidigm Cat# 3161011B; RRID:AB_2922920 Ly6C Fluidigmn Cat# 3162014B; RRID:AB_2922921 (Continued on next page) Cell Reports 40, 111167, August 9, 2022 e1

    Article Title: An oncogenic KRAS-driven secretome involving TNFα promotes niche preparation prior to pancreatic cancer onset
    Article Snippet: CD24 , 150Nd , M1/69 , Pre-conjugated , Fluidigm , 3150009B.

    Article Title: Murine brain tumor microenvironment immunophenotyping using mass cytometry
    Article Snippet: Anti-Mouse CD24 (M1/69)-150Nd—100 Tests , Fluidigm , SKU# 3150009B.

    Article Title: Murine brain tumor microenvironment immunophenotyping using mass cytometry
    Article Snippet: CD24 , 150Nd , M1/69 , Fluidigm , SKU# 3150009B.

    Virus:

    Article Title: Anatomical, subset, and HIV-dependent expression of viral sensors and restriction factors.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies CD57 Biolegend Cat#359602; RRID:AB_2562403 HLADR Thermo Fisher Scientific Cat#Q22158; RRID:AB_2556514 CD25 BD Biosciences Cat#555430; RRID:AB_395824 CD19 Standard BioTools Cat#3142001B; RRID:AB_3661857 IFI16 Santa Cruz Biotechnology Cat#sc-8023; RRID:AB_627775 CCR5 Standard BioTools Cat#3144007A; RRID:AB_2892770 IFITM1 Proteintech Cat#60074-1-Ig; RRID:AB_2233405 CD8 Standard BioTools Cat#3146001B; RRID:AB_3661846 cGAS Cell Signaling Technology Cat#79978S; RRID:AB_2905508 IFIT3 Novus Cat#NBP2-71006; RRID:AB_3094693 AIM2 Santa Cruz Biotechnology Cat#sc-293174; RRID:AB_3665129 HSA (CD24) Standard BioTools Cat3150009B; RRID:AB_2916042 LAG3 Standard BioTools Cat#3150030B; RRID:AB_3661851 pSTING Cell Signaling Technology Cat#40818; RRID:AB_2799187 SLFN11 Santa Cruz Biotechnology Cat#sc-374339; RRID:AB_10989536 MX2 Santa Cruz Biotechnology Cat#sc-271527; RRID:AB_10649506 IFIT1 Novus Cat#NBP2-71005; RRID:AB_3363102 pIRF3 Cell Signaling Technology Cat#29047; RRID:AB_2773013 SAMHD1 Proteintech Cat#12586-1-AP; RRID:AB_2183496 TRIM28 R and D Systems Cat#MAB7785; RRID:AB_3096992 PAF1 Santa Cruz Biotechnology Cat#sc-514491; RRID:AB_3665128 CCR7 Standard BioTools Cat#3159003A; RRID:AB_2938859 MX1 Cell Signaling Technology Cat#62815; RRID:AB_3665127 CD45RO Biolegend Cat#304239; RRID:AB_2563752 CD69 Standard BioTools Cat#3162001B; RRID:AB_3096016 TLR9 Novus Cat#NBP2-24729; RRID:AB_3272891 CXCR5 Standard BioTools Cat#3164029B; RRID:AB_3665126 pSAMHD1 Sigma-Aldrich Cat#MABF934; RRID:AB_3665125 PQBP1 Santa Cruz Biotechnology Cat#sc-376039; RRID:AB_10989350 CD27 Standard BioTools Cat#3167002B; RRID:AB_3094744 PD1 BD Biosciences Cat#562138; RRID:AB_10897007 CD45RA Standard BioTools Cat#3169008B; RRID:AB_3665124 CD3 Standard BioTools Cat#3170001B; RRID:AB_2811085 RIGI Novus Cat#NBP2-61849; RRID:AB_3351257 CD38 Standard BioTools Cat#3172007B; RRID:AB_2756288 BRD4 Abcam Cat#ab182446; RRID:AB_3665123 CD4 Standard BioTools Cat#3174004B; RRID:AB_3661864 CD14 Biolegend Cat#301843; RRID:AB_2562813 CD127 Standard BioTools Cat#3176004B; RRID:AB_3665122 TIGIT Standard BioTools Cat#3209013B; RRID:AB_2905649 Bacterial and virus strains HIV-F4.HSA (NL-HSA.6ATRi-C.109FPB4.ecto) Cavrois et al.34 N/A HIV-F4.HSA virions containing BlaM-Vpr Cavrois et al.34,67 N/A (Continued on next page) 16 Cell Reports 44, 115202, January 28, 2025 .. REAGENT or RESOURCE SOURCE IDENTIFIER GraphPad Prism (Version 10.2.0) http://www.graphpad.com/ RRID:SCR_002798 RStudio (2022.07.2 + 576 "Spotted Wakerobin" Release) https://rstudio.com/ RRID:SCR_000432 R Project for Statistical Computing (Version 4.2.1) http://www.r-project.org/ RRID:SCR_001905 CUHIMSR/CytofBatchAdjust Schuyler et al.95; https://github.com/ CUHIMSR/CytofBatchAdjust N/A ggplot2 https://cran.r-project.org/web/ packages/ggplot2/index.html RRID:SCR_014601 Rtsne https://github.com/jkrijthe/Rtsne RRID:SCR_016342 Seurat Hao et al.96; https://satijalab.org/ seurat/get_started.html RRID:SCR_016341 Harmony Korsunsky et al.97; https://github.com/ immunogenomics/harmony RRID:SCR_022206 RandomForest Package in R Breiman98; https://cran.r-project. org/web/packages/randomForest/ RRID:SCR_015718 lme4 Bates et al.99; https://cran.r-project. org/web/packages/lme4/index.html RRID:SCR_015654 emmeans https://CRAN.R-project.org/ package=emmeans RRID:SCR_018734

    Immunopeptidomics:

    Article Title: High-resolution phenotyping of early acute rejection reveals a conserved alloimmune signature.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Gr1 (RB6-8C5); Clone preferentially binds Ly6G Fluidigm Cat#3141005B; Lot#1201813 CD11c (N418) Fluidigm Cat#3142003B; Lot#1201819 GITR (DTA1) Fluidigm Cat#3143019B; Lot#2171502 MHCI (28-14-8) Fluidigm Cat#3144016B; Lot#0151802 CD69 (H1.2F3) Fluidigm Cat#3145005B; Lot#3511606 CD5 (53-7.3) Fluidigm Cat#3146012B; Lot#2041519 CD45 (30-F11) Fluidigm Cat#3147003B; Lot#3181713 CD11b (M1/70); Alt. name: Mac-1 Fluidigm Cat#3148003B; Lot#1621803 CD19 (6D5) Fluidigm Cat#3149002B; Lot#0581828 CD24 (M1/69) Fluidigm Cat3150009B; Lot#0901508 CD25 (3C7) Fluidigm Cat#3151007B; Lot#3511605 CD3ε (145 2X11) Fluidigm Cat#3152004B; Lot#2601606 CD8a (53 6.7) Fluidigm Cat#3153012B; Lot#0101806 CTLA4 (UC10-4B9); Alt. name: CD152 Fluidigm Cat#3154008B; Lot#1841809 TCRgd (UC7-13D5) Biolegend Cat#107502 CCR6 (29-2L17); Alt. name: CD196 Fluidigm Cat#3156016A; Lot#0581825 CD80 (16-10A1); Alt. name: B7-1 Biolegend Cat#104702 FOXP3 (FJK-16 s) Fluidigm Cat#3158003A; Lot#0691401 F4/80 (BM8) Fluidigm Cat#3159009B; Lot#0541707 CD62L (MEL-14) Fluidigm Cat#3160008B; Lot#2631805 Ly6C (HK1.4) Fluidigm Cat#3162014B; Lot#2341706 CCR7 (4B12); Alt. name: CD197 Fluidigm Cat#3164013A; Lot#0901709 NK1.1 (PK136) Fluidigm Cat#3165018B; Lot#0101808 CD27 (LG.3A10) Biolegend Cat#124202 NKp46 (29A1.4); Alt. name: CD335 Fluidigm Cat#3167008B; Lot#1501808 CD21 (7G6) Fluidigm Cat#3168010B; Lot#2371409 TCRb (H57 597) Fluidigm Cat#3169002B; Lot#0761712 CD40L (MR1); Alt. name: CD154 Fluidigm Cat#3170011B; Lot#2041508 CD44 (IM7) Fluidigm Cat#3171003B; Lot#3421608 CD4 (RM4-5) Fluidigm Cat#3172003B; Lot#1201808 Granzyme B (GB11) Fluidigm Cat#3173006B; Lot#1511802 LAG3 (C9B7W) Fluidigm Cat#3174019B; Lot#1201814 CD127 (A7R34); Alt. name: IL7Ra Fluidigm Cat#3175006B; Lot#0101807 B220 (RA3-6B2); Alt. name: CD45R Fluidigm Cat#3176002B; Lot#0321704 MHCII I-A/I-E (M5/114.15.2); Binds both donor and recipient MHC Fluidigm Cat#3209006B; Lot#2851707 Fc Block: TruStain FcX (anti-mouse CD16/32) Antibody Biolegend Cat#101320 Critical commercial assays Dead cell removal kit StemCell Cat#17899 40 micron nylon mesh Fisher Cat#352340 Cisplatin Fluidigm Cat#201195 Cell staining buffer Fluidigm Cat#201068 Cell-ID 20-Plex Pd Barcoding Kit Fluidigm Cat#201060 (Continued on next page) e1 Cell Reports 34, 108806, March 2, 2021 .. REAGENT or RESOURCE SOURCE IDENTIFIER Fix I buffer Fluidigm Cat#201065 Perm-S buffer Fluidigm Cat#201066 Fix and perm buffer Fluidigm Cat#201067 DNA intercalator Fluidigm Cat#201192a 35 micron cell strainer Fisher Cat#08-771-23 Experimental models: organisms/strains Mouse: C57BL/6 (H-2Kb) The Jackson Laboratory JAX: 000664 Mouse: BALB/c (H-2Kd) The Jackson Laboratory JAX: 000651 Software and algorithms Premessa Parker Institute for Cancer Immunotherapy https://github.com/ParkerICI/premessa FlowSOM (v1.18.0) Van Gassen et al., 2020 https://bioconductor.org/packages/release/bioc/ html/FlowSOM.html ConsensusClusterPlus (v1.50.0) Wilkerson and Hayes, 2010 https://bioconductor.org/packages/release/bioc/ html/ConsensusClusterPlus.html UMAP; v0.3.2.1 Becht et al., 2018 https://github.com/lmcinnes/umap Rtsne; v0.15 van der Maaten and Hinton, 2008 https://github.com/jkrijthe/Rtsne

    Blocking Assay:

    Article Title: High-resolution phenotyping of early acute rejection reveals a conserved alloimmune signature.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Gr1 (RB6-8C5); Clone preferentially binds Ly6G Fluidigm Cat#3141005B; Lot#1201813 CD11c (N418) Fluidigm Cat#3142003B; Lot#1201819 GITR (DTA1) Fluidigm Cat#3143019B; Lot#2171502 MHCI (28-14-8) Fluidigm Cat#3144016B; Lot#0151802 CD69 (H1.2F3) Fluidigm Cat#3145005B; Lot#3511606 CD5 (53-7.3) Fluidigm Cat#3146012B; Lot#2041519 CD45 (30-F11) Fluidigm Cat#3147003B; Lot#3181713 CD11b (M1/70); Alt. name: Mac-1 Fluidigm Cat#3148003B; Lot#1621803 CD19 (6D5) Fluidigm Cat#3149002B; Lot#0581828 CD24 (M1/69) Fluidigm Cat3150009B; Lot#0901508 CD25 (3C7) Fluidigm Cat#3151007B; Lot#3511605 CD3ε (145 2X11) Fluidigm Cat#3152004B; Lot#2601606 CD8a (53 6.7) Fluidigm Cat#3153012B; Lot#0101806 CTLA4 (UC10-4B9); Alt. name: CD152 Fluidigm Cat#3154008B; Lot#1841809 TCRgd (UC7-13D5) Biolegend Cat#107502 CCR6 (29-2L17); Alt. name: CD196 Fluidigm Cat#3156016A; Lot#0581825 CD80 (16-10A1); Alt. name: B7-1 Biolegend Cat#104702 FOXP3 (FJK-16 s) Fluidigm Cat#3158003A; Lot#0691401 F4/80 (BM8) Fluidigm Cat#3159009B; Lot#0541707 CD62L (MEL-14) Fluidigm Cat#3160008B; Lot#2631805 Ly6C (HK1.4) Fluidigm Cat#3162014B; Lot#2341706 CCR7 (4B12); Alt. name: CD197 Fluidigm Cat#3164013A; Lot#0901709 NK1.1 (PK136) Fluidigm Cat#3165018B; Lot#0101808 CD27 (LG.3A10) Biolegend Cat#124202 NKp46 (29A1.4); Alt. name: CD335 Fluidigm Cat#3167008B; Lot#1501808 CD21 (7G6) Fluidigm Cat#3168010B; Lot#2371409 TCRb (H57 597) Fluidigm Cat#3169002B; Lot#0761712 CD40L (MR1); Alt. name: CD154 Fluidigm Cat#3170011B; Lot#2041508 CD44 (IM7) Fluidigm Cat#3171003B; Lot#3421608 CD4 (RM4-5) Fluidigm Cat#3172003B; Lot#1201808 Granzyme B (GB11) Fluidigm Cat#3173006B; Lot#1511802 LAG3 (C9B7W) Fluidigm Cat#3174019B; Lot#1201814 CD127 (A7R34); Alt. name: IL7Ra Fluidigm Cat#3175006B; Lot#0101807 B220 (RA3-6B2); Alt. name: CD45R Fluidigm Cat#3176002B; Lot#0321704 MHCII I-A/I-E (M5/114.15.2); Binds both donor and recipient MHC Fluidigm Cat#3209006B; Lot#2851707 Fc Block: TruStain FcX (anti-mouse CD16/32) Antibody Biolegend Cat#101320 Critical commercial assays Dead cell removal kit StemCell Cat#17899 40 micron nylon mesh Fisher Cat#352340 Cisplatin Fluidigm Cat#201195 Cell staining buffer Fluidigm Cat#201068 Cell-ID 20-Plex Pd Barcoding Kit Fluidigm Cat#201060 (Continued on next page) e1 Cell Reports 34, 108806, March 2, 2021 .. REAGENT or RESOURCE SOURCE IDENTIFIER Fix I buffer Fluidigm Cat#201065 Perm-S buffer Fluidigm Cat#201066 Fix and perm buffer Fluidigm Cat#201067 DNA intercalator Fluidigm Cat#201192a 35 micron cell strainer Fisher Cat#08-771-23 Experimental models: organisms/strains Mouse: C57BL/6 (H-2Kb) The Jackson Laboratory JAX: 000664 Mouse: BALB/c (H-2Kd) The Jackson Laboratory JAX: 000651 Software and algorithms Premessa Parker Institute for Cancer Immunotherapy https://github.com/ParkerICI/premessa FlowSOM (v1.18.0) Van Gassen et al., 2020 https://bioconductor.org/packages/release/bioc/ html/FlowSOM.html ConsensusClusterPlus (v1.50.0) Wilkerson and Hayes, 2010 https://bioconductor.org/packages/release/bioc/ html/ConsensusClusterPlus.html UMAP; v0.3.2.1 Becht et al., 2018 https://github.com/lmcinnes/umap Rtsne; v0.15 van der Maaten and Hinton, 2008 https://github.com/jkrijthe/Rtsne

    Staining:

    Article Title: High-resolution phenotyping of early acute rejection reveals a conserved alloimmune signature.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Gr1 (RB6-8C5); Clone preferentially binds Ly6G Fluidigm Cat#3141005B; Lot#1201813 CD11c (N418) Fluidigm Cat#3142003B; Lot#1201819 GITR (DTA1) Fluidigm Cat#3143019B; Lot#2171502 MHCI (28-14-8) Fluidigm Cat#3144016B; Lot#0151802 CD69 (H1.2F3) Fluidigm Cat#3145005B; Lot#3511606 CD5 (53-7.3) Fluidigm Cat#3146012B; Lot#2041519 CD45 (30-F11) Fluidigm Cat#3147003B; Lot#3181713 CD11b (M1/70); Alt. name: Mac-1 Fluidigm Cat#3148003B; Lot#1621803 CD19 (6D5) Fluidigm Cat#3149002B; Lot#0581828 CD24 (M1/69) Fluidigm Cat3150009B; Lot#0901508 CD25 (3C7) Fluidigm Cat#3151007B; Lot#3511605 CD3ε (145 2X11) Fluidigm Cat#3152004B; Lot#2601606 CD8a (53 6.7) Fluidigm Cat#3153012B; Lot#0101806 CTLA4 (UC10-4B9); Alt. name: CD152 Fluidigm Cat#3154008B; Lot#1841809 TCRgd (UC7-13D5) Biolegend Cat#107502 CCR6 (29-2L17); Alt. name: CD196 Fluidigm Cat#3156016A; Lot#0581825 CD80 (16-10A1); Alt. name: B7-1 Biolegend Cat#104702 FOXP3 (FJK-16 s) Fluidigm Cat#3158003A; Lot#0691401 F4/80 (BM8) Fluidigm Cat#3159009B; Lot#0541707 CD62L (MEL-14) Fluidigm Cat#3160008B; Lot#2631805 Ly6C (HK1.4) Fluidigm Cat#3162014B; Lot#2341706 CCR7 (4B12); Alt. name: CD197 Fluidigm Cat#3164013A; Lot#0901709 NK1.1 (PK136) Fluidigm Cat#3165018B; Lot#0101808 CD27 (LG.3A10) Biolegend Cat#124202 NKp46 (29A1.4); Alt. name: CD335 Fluidigm Cat#3167008B; Lot#1501808 CD21 (7G6) Fluidigm Cat#3168010B; Lot#2371409 TCRb (H57 597) Fluidigm Cat#3169002B; Lot#0761712 CD40L (MR1); Alt. name: CD154 Fluidigm Cat#3170011B; Lot#2041508 CD44 (IM7) Fluidigm Cat#3171003B; Lot#3421608 CD4 (RM4-5) Fluidigm Cat#3172003B; Lot#1201808 Granzyme B (GB11) Fluidigm Cat#3173006B; Lot#1511802 LAG3 (C9B7W) Fluidigm Cat#3174019B; Lot#1201814 CD127 (A7R34); Alt. name: IL7Ra Fluidigm Cat#3175006B; Lot#0101807 B220 (RA3-6B2); Alt. name: CD45R Fluidigm Cat#3176002B; Lot#0321704 MHCII I-A/I-E (M5/114.15.2); Binds both donor and recipient MHC Fluidigm Cat#3209006B; Lot#2851707 Fc Block: TruStain FcX (anti-mouse CD16/32) Antibody Biolegend Cat#101320 Critical commercial assays Dead cell removal kit StemCell Cat#17899 40 micron nylon mesh Fisher Cat#352340 Cisplatin Fluidigm Cat#201195 Cell staining buffer Fluidigm Cat#201068 Cell-ID 20-Plex Pd Barcoding Kit Fluidigm Cat#201060 (Continued on next page) e1 Cell Reports 34, 108806, March 2, 2021 .. REAGENT or RESOURCE SOURCE IDENTIFIER Fix I buffer Fluidigm Cat#201065 Perm-S buffer Fluidigm Cat#201066 Fix and perm buffer Fluidigm Cat#201067 DNA intercalator Fluidigm Cat#201192a 35 micron cell strainer Fisher Cat#08-771-23 Experimental models: organisms/strains Mouse: C57BL/6 (H-2Kb) The Jackson Laboratory JAX: 000664 Mouse: BALB/c (H-2Kd) The Jackson Laboratory JAX: 000651 Software and algorithms Premessa Parker Institute for Cancer Immunotherapy https://github.com/ParkerICI/premessa FlowSOM (v1.18.0) Van Gassen et al., 2020 https://bioconductor.org/packages/release/bioc/ html/FlowSOM.html ConsensusClusterPlus (v1.50.0) Wilkerson and Hayes, 2010 https://bioconductor.org/packages/release/bioc/ html/ConsensusClusterPlus.html UMAP; v0.3.2.1 Becht et al., 2018 https://github.com/lmcinnes/umap Rtsne; v0.15 van der Maaten and Hinton, 2008 https://github.com/jkrijthe/Rtsne



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    Surface and intracellular antibody cocktails for antibody titrations

    Journal: STAR Protocols

    Article Title: Protocol for phenotyping mouse myeloid and lymphoid cells by mass cytometry

    doi: 10.1016/j.xpro.2025.103684

    Figure Lengend Snippet: Surface and intracellular antibody cocktails for antibody titrations

    Article Snippet: Anti-mouse CD24 (M1/69)-150Nd-100 tests , Standard BioTools , Cat#3150009B; RRID: AB_2916042.

    Techniques:

    Summary table of markers expressed for each cell type in mouse lungs, spleen and peritoneal lavage

    Journal: STAR Protocols

    Article Title: Protocol for phenotyping mouse myeloid and lymphoid cells by mass cytometry

    doi: 10.1016/j.xpro.2025.103684

    Figure Lengend Snippet: Summary table of markers expressed for each cell type in mouse lungs, spleen and peritoneal lavage

    Article Snippet: Anti-mouse CD24 (M1/69)-150Nd-100 tests , Standard BioTools , Cat#3150009B; RRID: AB_2916042.

    Techniques:

    Proposed gating strategy for identifying key murine tissue cell populations in both peritoneal lavage and lung tissue Mouse lung cells were isolated and labeled with the panel of 37 markers proposed in this protocol. After cell acquisition using the Helios mass cytometer and data cleaning, cells were identified using a gating strategy on the OMIQ software. The CD45- cells and CD45+ immune cells were first identified. We then identify B cells (CD19 + ) and among them B1 and B2 subpopulations, T cells (CD3 + ) and among them LTCD8+ and LTCD4+ and notably LTreg (Foxp3 + ), Natural killers (NK1.1 + ), neutrophils (Ly6G + ) and eosinophils (CD24 + CD170 + ). The remaining population, called

    Journal: STAR Protocols

    Article Title: Protocol for phenotyping mouse myeloid and lymphoid cells by mass cytometry

    doi: 10.1016/j.xpro.2025.103684

    Figure Lengend Snippet: Proposed gating strategy for identifying key murine tissue cell populations in both peritoneal lavage and lung tissue Mouse lung cells were isolated and labeled with the panel of 37 markers proposed in this protocol. After cell acquisition using the Helios mass cytometer and data cleaning, cells were identified using a gating strategy on the OMIQ software. The CD45- cells and CD45+ immune cells were first identified. We then identify B cells (CD19 + ) and among them B1 and B2 subpopulations, T cells (CD3 + ) and among them LTCD8+ and LTCD4+ and notably LTreg (Foxp3 + ), Natural killers (NK1.1 + ), neutrophils (Ly6G + ) and eosinophils (CD24 + CD170 + ). The remaining population, called "other myeloid cells", consisted mainly of monocytes, macrophages and dendritic cells (DC). In peritoneal lavage, the two populations of conventional DC, cDC1 and cDC2, were identified among mDC (CD11c + ) based on CD172a and CD209a staining. After exclusion of plasmacytoid DC (pDC) (SiglecH + ), two subpopulations of peritoneal macrophages (PM) (CD68 + F4/80 + ) were identified, the small PM (SPM)(I-A/I-E hi and CCR hi ) and the large PM (LPM). Finally, we identified classical monocytes based on Ly6c hi and CD43 lo staining. In lung tissue, we first identified alveolar macrophages (AM) (CD64 + CD68 + ) and after DC exclusion, we identified interstitial macrophages (IM) subpopulations (CD11b + I-A/I-E + ) and classical monocytes (Ly6c hi and CD43 lo ). Among CD11c + dendritic cells, we next identified plasmacytoid DC (pDC) (SiglecH + ) and the two subpopulations of conventional DC named cDC1 (CD103 + ) and cDC2 (CD172a + ).

    Article Snippet: Anti-mouse CD24 (M1/69)-150Nd-100 tests , Standard BioTools , Cat#3150009B; RRID: AB_2916042.

    Techniques: Isolation, Labeling, Cytometry, Software, Staining

    Journal: STAR Protocols

    Article Title: Protocol for phenotyping mouse myeloid and lymphoid cells by mass cytometry

    doi: 10.1016/j.xpro.2025.103684

    Figure Lengend Snippet:

    Article Snippet: Anti-mouse CD24 (M1/69)-150Nd-100 tests , Standard BioTools , Cat#3150009B; RRID: AB_2916042.

    Techniques: Purification, Blocking Assay, Recombinant, Sterility, Staining, Red Blood Cell Lysis, Antibody Labeling, Software, Membrane, Transferring, Spectrophotometry

    Journal: Cell Reports Medicine

    Article Title: LTA4H improves the tumor microenvironment and prevents HCC progression via targeting the HNRNPA1/LTBP1/TGF-β axis

    doi: 10.1016/j.xcrm.2025.102000

    Figure Lengend Snippet:

    Article Snippet: CD24; Mouse; 150ND , Fluidigm , 3150009B; RRID: AB_2916042.

    Techniques: Phospho-proteomics, Microarray, Recombinant, Lysis, Protease Inhibitor, SYBR Green Assay, Enzyme-linked Immunosorbent Assay, TUNEL Assay, Reverse Transcription, Activity Assay, Immunoprecipitation, Extraction, Purification, In Vitro, Transfection, Sequencing, Mass Cytometry, ChIP-sequencing, Transgenic Assay, Software

    KEY RESOURCES TABLE

    Journal: Cell reports

    Article Title: Anatomical, subset, and HIV-dependent expression of viral sensors and restriction factors

    doi: 10.1016/j.celrep.2024.115202

    Figure Lengend Snippet: KEY RESOURCES TABLE

    Article Snippet: HSA (CD24) , Standard BioTools , Cat#3150009B; RRID:AB_2916042.

    Techniques: Virus, Recombinant, Electron Microscopy, Clinical Proteomics, Modification, Antibody Labeling, Staining, Software