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zebrafish (v3) gene expression microarray 4×44k  (Agilent technologies)


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    Structured Review

    Agilent technologies zebrafish (v3) gene expression microarray 4×44k
    Zebrafish (V3) Gene Expression Microarray 4×44k, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/zebrafish+44k+microarray/pmc06960226-81-2-1
    Average 90 stars, based on 1 article reviews
    zebrafish (v3) gene expression microarray 4×44k - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    other:

    Article Title: Radiogenomic profiling of prostate tumors prior to external beam radiotherapy converges on a transcriptomic signature of TGF-β activity driving tumor recurrence
    Article Snippet: Gene level summaries from Agilent 4×44K microarrays of LNCaP and HPS-19I cultures [ ] were downloaded from GEO (Accession ID GSE51624).

    Article Title: The Arabidopsis Deubiquitylase OTU5 Suppresses Flowering by Histone Modification-Mediated Activation of the Major Flowering Repressors FLC , MAF4 , and MAF5 .
    Article Snippet: The fragmented cRNA was then pooled and hybridized to Arabidopsis (V4) 4×44K Microarray (Agilent Technologies) at 65 ◦C for 17 h. After the washing and drying steps, the microarrays were scanned with an Agilent microarray scanner (Agilent Technologies) at 535 nm for Cy3.

    Article Title: Histone deacetylation primes self-propagation of heterochromatin domains to promote epigenetic inheritance
    Article Snippet: Equal amounts of Cy5- and Cy3-labeled DNA were mixed and hybridized to 4×44K Agilent custom 60-mer oligonucleotide array according to Agilent’s protocol.

    Article Title: Staphylococcal protein A modulates inflammation by inducing interferon signaling in human nasal epithelial cells.
    Article Snippet: For RNA profiling, the Agilent Whole Mouse Genome Microarray 4×44K was used according to the manufacturer’s instruction with 100 ng RNA (RNA integrity number (RIN)> = 7).

    Article Title: c-Myc inhibits LAPTM5 expression in B-cell lymphomas.
    Article Snippet: Myc is a pivotal protooncogenic transcription factor that contributes to the development of almost all Burkitt’s lymphomas and about one-third of diffuse large B-cell lymphomas.. How B-cells sustain their uncontrolled proliferation due to high Myc is not yet well defined.. Here, we found that Myc trans-represses the expression of murine LAPTM5, a gene coding a lysosomeassociated protein, by binding to two E-boxes in the LAPTM5 promoter.

    Microarray:

    Article Title: Proteogenomic analysis reveals adaptive strategies to alleviate the consequences of aneuploidy in cancer
    Article Snippet: Genome-wide comparative genomic hybridization of cell lines (Supplementary Table 2) was carried out by IMGM laboratories (Martinsried, Germany). .. Agilent Human Genome CGH Microarrays (4×44K format) and SurePrint G3 Human CGH Microarray (4×180K format) were used in combination with a Two-Color based hybridization protocol with a commercially available reference gDNA. .. Signals on the microarrays were extracted using the Agilent DNA Microarray Scanner.

    Article Title: MiR-107 and MiR-185 Can Induce Cell Cycle Arrest in Human Non Small Cell Lung Cancer Cell Lines
    Article Snippet: The cRNA probe was generated from total RNA (500 ng) with the Low RNA Input linear amplification & Labeling kit (Agilent Technologies, Santa Clara, CA, USA). .. Cy3-labeled cRNA (1.65 μg) was then fragmented and relative expression was measured by hybridization to 4×44K whole human oligo microarray (Agilent). ..

    Hybridization:

    Article Title: Proteogenomic analysis reveals adaptive strategies to alleviate the consequences of aneuploidy in cancer
    Article Snippet: Genome-wide comparative genomic hybridization of cell lines (Supplementary Table 2) was carried out by IMGM laboratories (Martinsried, Germany). .. Agilent Human Genome CGH Microarrays (4×44K format) and SurePrint G3 Human CGH Microarray (4×180K format) were used in combination with a Two-Color based hybridization protocol with a commercially available reference gDNA. .. Signals on the microarrays were extracted using the Agilent DNA Microarray Scanner.

    Article Title: MiR-107 and MiR-185 Can Induce Cell Cycle Arrest in Human Non Small Cell Lung Cancer Cell Lines
    Article Snippet: The cRNA probe was generated from total RNA (500 ng) with the Low RNA Input linear amplification & Labeling kit (Agilent Technologies, Santa Clara, CA, USA). .. Cy3-labeled cRNA (1.65 μg) was then fragmented and relative expression was measured by hybridization to 4×44K whole human oligo microarray (Agilent). ..

    Article Title: 1,3-Diarylpyrazolyl-acylsulfonamides as potent anti-tuberculosis agents targeting cell wall biosynthesis in Mycobacterium tuberculosis
    Article Snippet: Fluorescent cDNA was analyzed with the Nanodrop ND-1000. .. Equal amounts (0.7 μg) of Cy3- and Cy5-labeled cDNA were hybridized to the Agilent SurePrint G3 4×44K custom oligonucleotide microarrays (design number 021966, 021362) in the TECAN HS Pro 4800 hybridization station. .. Hybridization was performed using Agilent 2x Gene expression hybridization HI-RPM buffer, and 10x Blocking Reagent at 65 °C for 17 h. Arrays were washed with Agilent Gene Expression Wash Buffer 1 at room temperature and Gene Expression Wash Buffer 2 at 37 °C.

    Expressing:

    Article Title: MiR-107 and MiR-185 Can Induce Cell Cycle Arrest in Human Non Small Cell Lung Cancer Cell Lines
    Article Snippet: The cRNA probe was generated from total RNA (500 ng) with the Low RNA Input linear amplification & Labeling kit (Agilent Technologies, Santa Clara, CA, USA). .. Cy3-labeled cRNA (1.65 μg) was then fragmented and relative expression was measured by hybridization to 4×44K whole human oligo microarray (Agilent). ..



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    Journal: eLife

    Article Title: Wilms Tumor 1b defines a wound-specific sheath cell subpopulation associated with notochord repair

    doi: 10.7554/eLife.30657

    Figure Lengend Snippet:

    Article Snippet: The labelled cRNA was hybridised against a 4 × 44K Whole Zebrafish (V3) Genome Oligo Microarray (Agilent Technologies).

    Techniques: Mutagenesis, Sequencing, Recombinant, Plasmid Preparation, Labeling, Microarray, Cell Culture, Software, Expressing