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zebrafish (v3) gene expression microarray 4 × 44k slides  (Agilent technologies)


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    Agilent technologies zebrafish (v3) gene expression microarray 4 × 44k slides
    Zebrafish (V3) Gene Expression Microarray 4 × 44k Slides, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/zebrafish+44k+microarray/pm28806688-68-9-18
    Average 90 stars, based on 1 article reviews
    zebrafish (v3) gene expression microarray 4 × 44k slides - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Labeling:

    Article Title: PAHs Target Hematopoietic Linages in Bone Marrow through Cyp1b1 Primarily in Mesenchymal Stromal Cells but Not AhR: A Reconstituted In Vitro Model
    Article Snippet: RNA was isolated using Qiagen's RNeasy mini-kit (Hilden, Germany) and quantified using a Nanodrop (Thermo Fisher Scientific; Waltham, MA) and integrity was assessed using formaldehyde agarose gel electrophoresis. .. Cy3 and Cy5 labeling was completed using Agilent Technologies' Dual Color Gene Expression kit and analysis was completed on the Whole Mouse Genome Microarray 4 × 44 slides, using the DNA Microarray Scanner and feature extraction software (Santa Clara, CA). ..

    Gene Expression:

    Article Title: PAHs Target Hematopoietic Linages in Bone Marrow through Cyp1b1 Primarily in Mesenchymal Stromal Cells but Not AhR: A Reconstituted In Vitro Model
    Article Snippet: RNA was isolated using Qiagen's RNeasy mini-kit (Hilden, Germany) and quantified using a Nanodrop (Thermo Fisher Scientific; Waltham, MA) and integrity was assessed using formaldehyde agarose gel electrophoresis. .. Cy3 and Cy5 labeling was completed using Agilent Technologies' Dual Color Gene Expression kit and analysis was completed on the Whole Mouse Genome Microarray 4 × 44 slides, using the DNA Microarray Scanner and feature extraction software (Santa Clara, CA). ..

    Microarray:

    Article Title: PAHs Target Hematopoietic Linages in Bone Marrow through Cyp1b1 Primarily in Mesenchymal Stromal Cells but Not AhR: A Reconstituted In Vitro Model
    Article Snippet: RNA was isolated using Qiagen's RNeasy mini-kit (Hilden, Germany) and quantified using a Nanodrop (Thermo Fisher Scientific; Waltham, MA) and integrity was assessed using formaldehyde agarose gel electrophoresis. .. Cy3 and Cy5 labeling was completed using Agilent Technologies' Dual Color Gene Expression kit and analysis was completed on the Whole Mouse Genome Microarray 4 × 44 slides, using the DNA Microarray Scanner and feature extraction software (Santa Clara, CA). ..

    Article Title: Characterization of Gene Expression Patterns among Artificially Developed Cancer Stem Cells Using Spherical Self-Organizing Map
    Article Snippet: .. For iPS-CC1 and iPS-GC1, the microarray study was carried out using a Whole Human Genome Oligo Microarray 4×44 K (Agilent Technologies). .. The analysis was performed according to the Agilent technical protocols.

    Article Title: Developing a Diagnostic Model to Predict the Risk of Asthma Based on Ten Macrophage-Related Gene Signatures
    Article Snippet: .. In detail, 54 AS and 15 normal samples detected by the Illumina humanRef-8 v2.0 expression beadchip were collected from GSE63067; 9 AS and 9 normal samples detected by the Agilent-026652 Whole Human Genome Microarray 4 × 44 K v2 were obtained from GSE148004 [ ], and 4 AS samples and 4 healthy controls were obtained from GSE112260 [ ] based on the Affymetrix Human Gene 2.1 ST Array. ..

    Article Title: Rilotumumab Resistance Acquired by Intracrine Hepatocyte Growth Factor Signaling
    Article Snippet: Array data were extracted using Agilent Feature Extraction Software (version 10.7) and imported into Rosetta Resolver software (version 7.2.2) for analysis. .. Following background correction and normalization of microarray data, a difference set of significant mRNA expression changes between the parental and resistant cell lines was derived (defined as >1.17-fold and p < 1.00 × 10 −4 ; 11,523 probe IDs) and a subset of 7688 genes that were significantly modulated 1.5-fold or greater ( ) were uploaded for Ingenuity Pathway Analysis (IPA) core analysis with either User Data Set or the Agilent Whole Genome Microarray 4 × 44k v2 probe set as reference set; both direct and indirect relationships were included. ..

    Article Title: Current approaches and developments in transcript profiling of the human placenta
    Article Snippet: , Not publically available , Affymetrix Human Genome U133A Array , Microarray , Tissue , Placenta biopsy (basal plate + chorionic villi) , 18 (pooled in groups of 3) −9 C −9 PE , 3rd trimester , PE vs controls , Hoegh et al. (2010) . .. , Not publically available , Agilent Human Genome Microarray 4 × 44K , Microarray , Tissue , Chorionic villi , 26 (pooled) −13 C −13 PE , 3rd trimester , PE vs controls , Lee et al. (2010) . .. , Not publically available , Operon Human Genome Array Ready Oligo Set versions 2.1 and 2.1.1 , Microarray , Tissue , Chorionic villi , 35 −15 C (normal notch) −15 PE −5 non-normal notch , 3rd trimester , PE vs controls (with Doppler findings) , Centlow et al. (2011) .

    Article Title: A synergistic antiproliferation effect of curcumin and docosahexaenoic acid in SK-BR-3 breast cancer cells: unique signaling not explained by the effects of either compound alone
    Article Snippet: .. Detection of antiproliferation synergy for CCM+DHA within the SK-BR-3 cell line was followed by transcript analysis using the Agilent Whole Human Genome Microarray 4 × 44 K platform, demonstrating a broad gene regulatory response across several functional categories that have little in common with transcript level changes caused by CCM or DHA alone. ..

    Extraction:

    Article Title: PAHs Target Hematopoietic Linages in Bone Marrow through Cyp1b1 Primarily in Mesenchymal Stromal Cells but Not AhR: A Reconstituted In Vitro Model
    Article Snippet: RNA was isolated using Qiagen's RNeasy mini-kit (Hilden, Germany) and quantified using a Nanodrop (Thermo Fisher Scientific; Waltham, MA) and integrity was assessed using formaldehyde agarose gel electrophoresis. .. Cy3 and Cy5 labeling was completed using Agilent Technologies' Dual Color Gene Expression kit and analysis was completed on the Whole Mouse Genome Microarray 4 × 44 slides, using the DNA Microarray Scanner and feature extraction software (Santa Clara, CA). ..

    Software:

    Article Title: PAHs Target Hematopoietic Linages in Bone Marrow through Cyp1b1 Primarily in Mesenchymal Stromal Cells but Not AhR: A Reconstituted In Vitro Model
    Article Snippet: RNA was isolated using Qiagen's RNeasy mini-kit (Hilden, Germany) and quantified using a Nanodrop (Thermo Fisher Scientific; Waltham, MA) and integrity was assessed using formaldehyde agarose gel electrophoresis. .. Cy3 and Cy5 labeling was completed using Agilent Technologies' Dual Color Gene Expression kit and analysis was completed on the Whole Mouse Genome Microarray 4 × 44 slides, using the DNA Microarray Scanner and feature extraction software (Santa Clara, CA). ..

    other:

    Article Title: Staphylococcal protein A modulates inflammation by inducing interferon signaling in human nasal epithelial cells
    Article Snippet: For RNA profiling, the Agilent Whole Mouse Genome Microarray 4×44K was used according to the manufacturer’s instruction with 100 ng RNA (RNA integrity number (RIN)> = 7).

    Article Title: Differential Adipose Tissue Gene Expression Profiles in Abacavir Treated Patients That May Contribute to the Understanding of Cardiovascular Risk: A Microarray Study
    Article Snippet: [ ] Probeset filtering was performed using the Agi4x44PreProcess filter method using AFE provided flags to identify features with quantification errors of the signal, reducing the 45,015 features on the Agilent Whole Human Genome Microarray 4×44K array by 34%, or 15,339 features.

    Expressing:

    Article Title: Developing a Diagnostic Model to Predict the Risk of Asthma Based on Ten Macrophage-Related Gene Signatures
    Article Snippet: .. In detail, 54 AS and 15 normal samples detected by the Illumina humanRef-8 v2.0 expression beadchip were collected from GSE63067; 9 AS and 9 normal samples detected by the Agilent-026652 Whole Human Genome Microarray 4 × 44 K v2 were obtained from GSE148004 [ ], and 4 AS samples and 4 healthy controls were obtained from GSE112260 [ ] based on the Affymetrix Human Gene 2.1 ST Array. ..

    Article Title: Rilotumumab Resistance Acquired by Intracrine Hepatocyte Growth Factor Signaling
    Article Snippet: Array data were extracted using Agilent Feature Extraction Software (version 10.7) and imported into Rosetta Resolver software (version 7.2.2) for analysis. .. Following background correction and normalization of microarray data, a difference set of significant mRNA expression changes between the parental and resistant cell lines was derived (defined as >1.17-fold and p < 1.00 × 10 −4 ; 11,523 probe IDs) and a subset of 7688 genes that were significantly modulated 1.5-fold or greater ( ) were uploaded for Ingenuity Pathway Analysis (IPA) core analysis with either User Data Set or the Agilent Whole Genome Microarray 4 × 44k v2 probe set as reference set; both direct and indirect relationships were included. ..

    Derivative Assay:

    Article Title: Rilotumumab Resistance Acquired by Intracrine Hepatocyte Growth Factor Signaling
    Article Snippet: Array data were extracted using Agilent Feature Extraction Software (version 10.7) and imported into Rosetta Resolver software (version 7.2.2) for analysis. .. Following background correction and normalization of microarray data, a difference set of significant mRNA expression changes between the parental and resistant cell lines was derived (defined as >1.17-fold and p < 1.00 × 10 −4 ; 11,523 probe IDs) and a subset of 7688 genes that were significantly modulated 1.5-fold or greater ( ) were uploaded for Ingenuity Pathway Analysis (IPA) core analysis with either User Data Set or the Agilent Whole Genome Microarray 4 × 44k v2 probe set as reference set; both direct and indirect relationships were included. ..

    Indirect Immunoperoxidase Assay:

    Article Title: Rilotumumab Resistance Acquired by Intracrine Hepatocyte Growth Factor Signaling
    Article Snippet: Array data were extracted using Agilent Feature Extraction Software (version 10.7) and imported into Rosetta Resolver software (version 7.2.2) for analysis. .. Following background correction and normalization of microarray data, a difference set of significant mRNA expression changes between the parental and resistant cell lines was derived (defined as >1.17-fold and p < 1.00 × 10 −4 ; 11,523 probe IDs) and a subset of 7688 genes that were significantly modulated 1.5-fold or greater ( ) were uploaded for Ingenuity Pathway Analysis (IPA) core analysis with either User Data Set or the Agilent Whole Genome Microarray 4 × 44k v2 probe set as reference set; both direct and indirect relationships were included. ..

    Functional Assay:

    Article Title: A synergistic antiproliferation effect of curcumin and docosahexaenoic acid in SK-BR-3 breast cancer cells: unique signaling not explained by the effects of either compound alone
    Article Snippet: .. Detection of antiproliferation synergy for CCM+DHA within the SK-BR-3 cell line was followed by transcript analysis using the Agilent Whole Human Genome Microarray 4 × 44 K platform, demonstrating a broad gene regulatory response across several functional categories that have little in common with transcript level changes caused by CCM or DHA alone. ..



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    Image Search Results


    Journal: eLife

    Article Title: Wilms Tumor 1b defines a wound-specific sheath cell subpopulation associated with notochord repair

    doi: 10.7554/eLife.30657

    Figure Lengend Snippet:

    Article Snippet: The labelled cRNA was hybridised against a 4 × 44K Whole Zebrafish (V3) Genome Oligo Microarray (Agilent Technologies).

    Techniques: Mutagenesis, Sequencing, Recombinant, Plasmid Preparation, Labeling, Microarray, Cell Culture, Software, Expressing