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simplot v3.5.1 program  (Simplot Science)

 
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    Simplot Science simplot v3.5.1 program
    Simplot V3.5.1 Program, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/v3%2E5%2E1+-+program/simplot+software/pmc12029519-136-13-13
    Average 90 stars, based on 1 article reviews
    simplot v3.5.1 program - by Bioz Stars, 2026-09
    90/100 stars

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    other:

    Article Title: Circulated echovirus 18 strains in Guangdong Province and worldwide: A novel perspective on genetic diversity and recombination patterns.
    Article Snippet: Similarity plots were constructed and boot-scanning analyses were performed to identify recombination breakpoints using the Simplot software (v3.5.1), employing a 200-nucleotide sliding window that advanced in 20-nucleotide increments with 500 replications[12,17].

    Article Title: The study on the molecular characteristics and variation patterns of the recombinant Muscovy duck parvovirus strain GD-23.
    Article Snippet: The recombination events were further validated using SimPlot software, which yielded results consistent with those obtained using RDP4 analysis.

    Article Title: Molecular characteristics of human adenovirus isolated from the 2024 influenza-like illness outbreaks in Suzhou City, China
    Article Snippet: Fig. 4 Genome recombination analysis of the three representative recombinant strains (A-C) and reference strain NICED/23 − 01/1914 (D) by SimPlot software.

    Article Title: Parenteral viral hepatitis among students in Da Nang, Vietnam, and insights into new hepatitis B virus genotype B classification
    Article Snippet: The recombination events were analyzed by similarity plot and bootscan methods using SimPlot software .

    Article Title: Interspecies transmission and genome heterogeneity of porcine-originated Rotavirus A between domestic pigs and wildlife in the Croatian ecosystem.
    Article Snippet: • Wildlife poRVAs matched domestic pig strains, confirming interspecies

    Article Title: Molecular characteristics of human adenovirus isolated from the 2024 influenza-like illness outbreaks in Suzhou City, China.
    Article Snippet: Potential recombination events were further confirmed and visualized using SimPlot 3.5.1 software.

    Software:

    Article Title: Development of a direct whole genome sequencing for hepatitis A virus from serum and analysis of genetic characteristics.
    Article Snippet: Comparative genomic analysis of hepatitis A virus (HAV) strains. (a) SimPlot analysis between serum HAV stains and IA, IB, IIA, IIB, IIIA, and IIIB genotype strains and (b) comparison of serum HAV strains and IA genotype strains. .. Analysis was performed using SimPlot + + software with a Jukes-Cantor model and window size of 450 bp with steps of 20 nucleotides. ..



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