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transcriptome data  (Human Protein Atlas)

 
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    Human Protein Atlas transcriptome data
    Transcriptome Data, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/transcriptome+data/database+hpa/pm42162075-113-16-20
    Average 86 stars, based on 1 article reviews
    transcriptome data - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    Expressing:

    Article Title: Desmoglein 2 is associated with dihydroartemisinin resistance in HeLa cervical cancer cells: a potential link to the PI3K/AKT signaling pathway.
    Article Snippet: .. AR TIC LE IN PR ES S ARTICLE IN PRESS present study was primarily conducted in the HeLa cell line, we validated the prognostic value of DSG2 using TCGA‐CESC clinical data and confirmed its protein expression via the Human Protein Atlas (HPA) database. ..

    Article Title: Integrative Bioinformatics Analysis Reveals COL13A1 and COL23A1 as Potential Diagnostic and Prognostic Biomarkers in Thyroid Cancer
    Article Snippet: .. The Human Protein Atlas (HPA) database was used to analyze histological images and evaluate the protein expression levels of COL13A1 and COL23A1 genes. ..

    Article Title: TiSMeD: A tissue-specific methylation and expression database for biomarker and translational applications
    Article Snippet: .. The transcriptome datasets were obtained from GEO, , the Genotype-Tissue Expression (GTEx) database, the Human Protein Atlas (HPA), and the RNA-seq Atlas. ..

    Immunohistochemical staining:

    Article Title: Filamin C activates MAPK/ERK signaling to facilitate epithelial-mesenchymal transition in bladder cancer.
    Article Snippet: Background Bladder cancer (BC) is a prevalent malignancy with high metastatic and recurrent potential.. Filamin C (FLNC) has been reported implicated in various cancers, but its role in BC remains unclear.. Methods Bioinformatics analysis using The gene expression profiling interactive analysis (GEPIA) and The cancer genome atlas (TCGA) databases assessed FLNC expression, prognosis, and multivariate Cox regression in bladder urothelial carcinoma (BLCA).

    RNA Sequencing:

    Article Title: TiSMeD: A tissue-specific methylation and expression database for biomarker and translational applications
    Article Snippet: .. The transcriptome datasets were obtained from GEO, , the Genotype-Tissue Expression (GTEx) database, the Human Protein Atlas (HPA), and the RNA-seq Atlas. ..



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    a) Log 2 ([elevated temperature/control] average total accumulation) of metabolic categories (n≥3) at six different seed developmental stages. b) Untargeted metabolomic data statistical analysis. c) Differentially accumulated metabolic features during seed development. d) Number of major metabolic categories (Flavonoids, Cinnamic acids and derivatives, and Glucosinolates) induced by elevated temperature at each seed developmental stage. e) Transcriptomic data statistical analysis. f) Differentially expressed genes during seed development. g) Percentages of genes coding for enzymes putatively involved in specialized metabolite modifications (Acyltransferases, Glycosyltransferases, Hydroxylases and Methyltransferases) induced, and repressed, at each seed developmental stage by elevated temperature.

    Journal: bioRxiv

    Article Title: Elevated temperature drives the biosynthesis of novel acylated glucosinolates in Arabidopsis thaliana seeds

    doi: 10.64898/2026.06.03.729804

    Figure Lengend Snippet: a) Log 2 ([elevated temperature/control] average total accumulation) of metabolic categories (n≥3) at six different seed developmental stages. b) Untargeted metabolomic data statistical analysis. c) Differentially accumulated metabolic features during seed development. d) Number of major metabolic categories (Flavonoids, Cinnamic acids and derivatives, and Glucosinolates) induced by elevated temperature at each seed developmental stage. e) Transcriptomic data statistical analysis. f) Differentially expressed genes during seed development. g) Percentages of genes coding for enzymes putatively involved in specialized metabolite modifications (Acyltransferases, Glycosyltransferases, Hydroxylases and Methyltransferases) induced, and repressed, at each seed developmental stage by elevated temperature.

    Article Snippet: Untargeted metabolomic raw data (.mzXML) for both negative and positive ESI modes, and metadata have been deposited at the MassiVE data repository portal with the following identifiers: The transcriptomic RNA-Seq raw data (FASTQ) have been deposited at the National Center for Biotechnology Information (NCBI) Transcriptome Shotgun Assembly Sequence Database (TSA) with BioProject identification PRJNA1344327.

    Techniques: Control, Metabolomic