seqsphere + software v 7.7.2 (Ridom GmbH)
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Seqsphere + Software V 7.7.2, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/seqsphere+++software/seqsphere/pm40598567-87-7-12
Average 90 stars, based on 1 article reviews
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Construct:Article Title: Genomic Epidemiology of Enterococcus faecium Bloodstream Infections During a VanB-type VRE Peak Reveals an Oligoclonal Scenario: An Observational Study at a German University Hospital (2017–2022) Article Snippet: MLST and cgMLST were carried out using established Article Title: Comparative genomic analysis of resistance and virulence genes in staphylococcus epidermidis and their impact on clinical outcome of musculoskeletal infections. Article Snippet: Total DNA from the isolates was extracted via a total DNA kit (Zymo) and quantified via a Qubit 3.0 fluorometer (Thermo Fisher Scientific, Waltham, MA, USA). Article Title: Staphylococcus aureus From Prosthetic Joint Infections and Blood Cultures Display the Same Genetic Background. Article Snippet: DNA extraction was performed using the QIAsymphony DSP Virus/Pathogen Midi kit (Qiagen GmbH, Hilden, Germany) with the QIAsymphony system (Qiagen) according to the manufacturer's instructions, with RNase treatment and elution in Tris–HCl (pH 8). Article Title: Multi-host distribution of Rhodococcus equi (Prescottella equi) strains and their phylogenomic clustering Article Snippet: Tree constructed using ad hoc core-genome MLST (cgMLST) scheme containing 2’737 genes generated in Article Title: Interpreting whole-genome sequencing data during neonatal Klebsiella oxytoca complex outbreak management. Article Snippet: The resulting genome sequences were analysed using Article Title: High genetic relatedness between multidrug resistant bacteria before and after the 2022 invasion of Ukraine. Article Snippet: First, core genome MLST was performed in SeqSphere + Software v 7.7.2 ( Article Title: Multi-host distribution of Rhodococcus equi (Prescottella equi) strains and their phylogenomic clustering Article Snippet: Core-genome MLST (cgMLST) analysis for 286 Generated:Article Title: Genomic Epidemiology of Enterococcus faecium Bloodstream Infections During a VanB-type VRE Peak Reveals an Oligoclonal Scenario: An Observational Study at a German University Hospital (2017–2022) Article Snippet: MLST and cgMLST were carried out using established Article Title: Comparative genomic analysis of resistance and virulence genes in staphylococcus epidermidis and their impact on clinical outcome of musculoskeletal infections. Article Snippet: Total DNA from the isolates was extracted via a total DNA kit (Zymo) and quantified via a Qubit 3.0 fluorometer (Thermo Fisher Scientific, Waltham, MA, USA). Article Title: Staphylococcus aureus From Prosthetic Joint Infections and Blood Cultures Display the Same Genetic Background. Article Snippet: DNA extraction was performed using the QIAsymphony DSP Virus/Pathogen Midi kit (Qiagen GmbH, Hilden, Germany) with the QIAsymphony system (Qiagen) according to the manufacturer's instructions, with RNase treatment and elution in Tris–HCl (pH 8). Article Title: Multi-host distribution of Rhodococcus equi (Prescottella equi) strains and their phylogenomic clustering Article Snippet: Tree constructed using ad hoc core-genome MLST (cgMLST) scheme containing 2’737 genes generated in Article Title: Interpreting whole-genome sequencing data during neonatal Klebsiella oxytoca complex outbreak management. Article Snippet: The resulting genome sequences were analysed using Article Title: High genetic relatedness between multidrug resistant bacteria before and after the 2022 invasion of Ukraine. Article Snippet: First, core genome MLST was performed in SeqSphere + Software v 7.7.2 ( Article Title: Multi-host distribution of Rhodococcus equi (Prescottella equi) strains and their phylogenomic clustering Article Snippet: Core-genome MLST (cgMLST) analysis for 286 Isolation:Article Title: Genomic Epidemiology of Enterococcus faecium Bloodstream Infections During a VanB-type VRE Peak Reveals an Oligoclonal Scenario: An Observational Study at a German University Hospital (2017–2022) Article Snippet: MLST and cgMLST were carried out using established Article Title: Comparative genomic analysis of resistance and virulence genes in staphylococcus epidermidis and their impact on clinical outcome of musculoskeletal infections. Article Snippet: Total DNA from the isolates was extracted via a total DNA kit (Zymo) and quantified via a Qubit 3.0 fluorometer (Thermo Fisher Scientific, Waltham, MA, USA). Article Title: Staphylococcus aureus From Prosthetic Joint Infections and Blood Cultures Display the Same Genetic Background. Article Snippet: DNA extraction was performed using the QIAsymphony DSP Virus/Pathogen Midi kit (Qiagen GmbH, Hilden, Germany) with the QIAsymphony system (Qiagen) according to the manufacturer's instructions, with RNase treatment and elution in Tris–HCl (pH 8). Article Title: Multi-host distribution of Rhodococcus equi (Prescottella equi) strains and their phylogenomic clustering Article Snippet: Tree constructed using ad hoc core-genome MLST (cgMLST) scheme containing 2’737 genes generated in Article Title: Interpreting whole-genome sequencing data during neonatal Klebsiella oxytoca complex outbreak management. Article Snippet: The resulting genome sequences were analysed using Article Title: High genetic relatedness between multidrug resistant bacteria before and after the 2022 invasion of Ukraine. Article Snippet: First, core genome MLST was performed in SeqSphere + Software v 7.7.2 ( Article Title: Multi-host distribution of Rhodococcus equi (Prescottella equi) strains and their phylogenomic clustering Article Snippet: Core-genome MLST (cgMLST) analysis for 286 Plasmid Preparation:Article Title: Genomic Epidemiology of Enterococcus faecium Bloodstream Infections During a VanB-type VRE Peak Reveals an Oligoclonal Scenario: An Observational Study at a German University Hospital (2017–2022) Article Snippet: MLST and cgMLST were carried out using established Article Title: Comparative genomic analysis of resistance and virulence genes in staphylococcus epidermidis and their impact on clinical outcome of musculoskeletal infections. Article Snippet: Total DNA from the isolates was extracted via a total DNA kit (Zymo) and quantified via a Qubit 3.0 fluorometer (Thermo Fisher Scientific, Waltham, MA, USA). Article Title: Staphylococcus aureus From Prosthetic Joint Infections and Blood Cultures Display the Same Genetic Background. Article Snippet: DNA extraction was performed using the QIAsymphony DSP Virus/Pathogen Midi kit (Qiagen GmbH, Hilden, Germany) with the QIAsymphony system (Qiagen) according to the manufacturer's instructions, with RNase treatment and elution in Tris–HCl (pH 8). Article Title: Multi-host distribution of Rhodococcus equi (Prescottella equi) strains and their phylogenomic clustering Article Snippet: Tree constructed using ad hoc core-genome MLST (cgMLST) scheme containing 2’737 genes generated in Article Title: Interpreting whole-genome sequencing data during neonatal Klebsiella oxytoca complex outbreak management. Article Snippet: The resulting genome sequences were analysed using Article Title: High genetic relatedness between multidrug resistant bacteria before and after the 2022 invasion of Ukraine. Article Snippet: First, core genome MLST was performed in SeqSphere + Software v 7.7.2 ( Article Title: Multi-host distribution of Rhodococcus equi (Prescottella equi) strains and their phylogenomic clustering Article Snippet: Core-genome MLST (cgMLST) analysis for 286 |
