oligonucleotide array (Illumina Inc)

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Illumina Inc oligonucleotide array
Oligonucleotide Array, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/oligonucleotide+array/oligonucleotide+arrays/pm40482883-212-44-34
Average 90 stars, based on 1 article reviews

oligonucleotide array - by Bioz Stars, 2026-10

90/100 stars

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Biomarker Discovery:

Article Title: A Comparative Study of Medium-coverage Genome Sequencing and SNP Array Technology in Identifying Chromosomal Abnormalities to Advance Prenatal and Postnatal Diagnosis.
Article Snippet: .. Hayes JL, Tzika A, Thygesen H, Berri S, Wood HM, Hewitt S, Pendlebury M, Coates A, 379 Willoughby L, Watson CM, Rabbitts P, Roberts P, Taylor GR: Diagnosis of copy number 380 variation by Illumina next generation sequencing is comparable in performance to 381 oligonucleotide array comparative genomic hybridisation. .. Hayes JL, Tzika A, Thygesen H, Berri S, Wood HM, Hewitt S, Pendlebury M, Coates A, 379 Willoughby L, Watson CM, Rabbitts P, Roberts P, Taylor GR: Diagnosis of copy number 380 variation by Illumina next generation sequencing is comparable in performance to 381 oligonucleotide array comparative genomic hybridisation.

Next-Generation Sequencing:

Hybridization:

Microarray:

Article Title: Targeted Transcriptome and <i>KRAS</i> Mutation Analysis Improve the Diagnostic Performance of EUS-FNA Biopsies in Pancreatic Cancer
Article Snippet: Oligonucleotide microarray data processing Raw affymetrix oligonucleotidemicroarray data (datasets E-MEXP1121/E-MEXP-950, GSE15471, and GSE28735) were processed using the oligo package for R (29) using updated probeset definitions from Custom CDF v23 downloaded from http://brainarray.mbni.med. umich.edu/Brainarray/Database/CustomCDF/23.0.0/ensg.asp (30) and RMA-normalized as implemented in the oligo package (29). .. Raw Illumina oligonucleotide microarray data (datasets GSE101462, GSE101448) were vsn-normalized using the vsn package for R (31). ..

Variant Assay:

Article Title: Deep mutational scanning of proteins in mammalian cells.
Article Snippet: .. Single-site saturation variant libraries are achieved through randomization of the corresponding single codons in degenerate oligonucleotides17,25,50 or through specific singlecodon substitutions in a designed oligonucleotide library synthesized on an array.32,49,65 In degenerate oligonucleotides, different modes of codon randomization influence the representation of each amino acid substitution linked to the degeneracy of the genetic code.74,75 In oligonucleotide arrays, each amino acid substitution is usually equally represented through one codon substitution, and additionally, codon usage can guide the choice of this codon.32 However, it could be more informative and comprehensive to look at all codon substitutions in studies related to translation, folding, and stability.76 Another advantage of oligonucleotide arrays involves the option to introduce insertions and deletions.15,36,49 Because oligonucleotide synthesis is prone to error with increasing length (100–200 bp), longer variable regions need to be subdivided into multiple oligonucleotide arrays that are usually separately synthesized and integrated.32 In addition, this allows for the generation of sublibraries covering partial variable regions compatible with Illumina sequencing read length. ..

Synthesized:

Introduce:

Oligonucleotide Synthesis:

other:

Article Title: Probe Selection and Expression Index Computation of Affymetrix Exon Arrays
Article Snippet: A variety of gene expression microarray platforms are used today, including spotted cDNA arrays, Affymetrix GeneChip arrays, Agilent ink-jet arrays and Illumina long-oligonucleotide bead-based arrays , .

Amplification:

Article Title: Cell population-specific expression analysis of human cerebellum
Article Snippet: Two rounds of amplification were carried out with the Ambion MessageAmp II aRNA kit. .. Illumina human oligonucleotide arrays (HumanHT-12) were used according to the manufacturer's instructions, starting with 750 ng of amplified RNA for each sample. .. Array chips were scanned on an Illumina Bead array reader confocal scanner.

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