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mega6 program  (Hasegawa Co Ltd)

 
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    Hasegawa Co Ltd mega6 program
    Mega6 Program, supplied by Hasegawa Co Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mega6+program/mega6/pmc05803923-110-39-33
    Average 90 stars, based on 1 article reviews
    mega6 program - by Bioz Stars, 2026-09
    90/100 stars

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    Generated:

    Article Title: The Spread of Peste Des Petits Ruminants Virus Lineage IV in West Africa
    Article Snippet: .. Phylogenetic trees incorporating all the sequences generated in this study combined with the others available in GenBank (the accession numbers are shown in ) were estimated using the maximum likelihood (ML) method available in MEGA 6 [ ], using the Hasegawa–Kishino–Yano plus Gamma Distributed (HKY + G) model of nucleotide substitution and 1000 bootstrap replications. (Note: the analyzed N gene fragment was 219 bp, as this allowed the inclusion of all relevant sequences from GenBank). ..

    Article Title: The Spread of Peste Des Petits Ruminants Virus Lineage IV in West Africa.
    Article Snippet: .. Phylogenetic trees incorporating all the sequences generated in this study combined with the others available in GenBank (the accession numbers are shown in Figure 2) were estimated using the maximum likelihood (ML) method available in MEGA 6 [14], using the Hasegawa– Kishino–Yano plus Gamma Distributed (HKY + G) model of nucleotide substitution and 1000 bootstrap replications. (Note: the analyzed N gene fragment was 219 bp, as this allowed the inclusion of all relevant sequences from GenBank). ..

    other:

    Article Title: Genetic characterisation of the influenza viruses circulating in Bulgaria during the 2019–2020 winter season
    Article Snippet: The best-fit nucleotide substitution models for phylogenetic analysis of HA (Hasegawa-Kishino-Yano model with a gamma distribution, HKY + G) and NA (Tamura 3-parameter model with gamma distribution, T92 + G) were determined using MEGA 6.06.

    Article Title: Global epidemiology and molecular biology of Taenia multiceps : a comparative meta-analysis and in silico analysis study
    Article Snippet: Phylogenetic trees were constructed using the maximum likelihood analysis based on Hasegawa–Kishino–Yano (HKY) model in the software MEGA (6), which was also used to convert the sequences into Nexus format (Maddison et al. , 1997 ).

    Article Title: Complete genomic characterization of a reassortment isolate of Sophora yellow stunt virus from Sophora alopecuroides in China
    Article Snippet: Sophora alopecuroides is an important shrub widely distributed in arid and semi-arid regions of Asia.. Recently, S. alopecuroides plants with symptoms of severe stunting, yellowing and small sized leaves were observed in Wuhai, Inner Mongolia, of China.. In this work, the infection of Sophora yellow stunt virus (SYSV), a virus belonging to the genus Nanovirus, was confirmed by next-generation sequencing of small RNAs.

    Article Title: HIV-1 and BLV are insensitive to SERINC5 restriction under the cell-cell infection
    Article Snippet: The phylogenetic tree was made by MEGA6 via the maximum likelihood method and the Hasegawa-Kishino-Yano model.

    Selection:

    Article Title: Rickettsia lusitaniae in Ornithodoros Porcinus Ticks, Zambia
    Article Snippet: .. Evolutionary history was inferred in MEGA6 using the maximum likelihood method based on the Hasegawa–Kishino–Yano model. Model selection was conducted using MEGA6. ..

    Construct:

    Article Title: Identification of entomopathogenic fungus Metarhizium rileyi infested in fall armyworm in the cornfield of Korea, and evaluation of its virulence.
    Article Snippet: Funding information Agriculture, Food, and Rural Affairs Convergence Technologies Program, Grant/Award Number: 321001‐03 Abstract The fall armyworm (FAW) Spodoptera frugiperda is an important invasive pest in Africa and Asia.. It is a polyphagous pest with at least 353 recorded host plant species, including corn.. Chemical control of this pest is unsuccessful because of a developed resistance and harmful effects on the environment.



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    The EVR1 gene family in Arabidopsis. A, Phylogenetic analysis of EVR1 and EVR1L proteins from Arabidopsis, Glycine max, Oryza sativa, Zea mays, Physcomitrella patens, Chlamydomonas reinhardtii, and Saccharomyces cerevisiae. Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the <t>MEGA6</t> program (Tamura et al., 2013). B, Gene structure analysis of EVR1 and EVR1L1. Gene models were drawn as in Fig. 2A. The numbers of coding nucleotides in each exon were marked. C, An alignment of amino acid sequences of EVR1 and EVR1L1. The alignment was generated by the software ClustalW2 (Larkin et al., 2007).
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    The EVR1 gene family in Arabidopsis. A, Phylogenetic analysis of EVR1 and EVR1L proteins from Arabidopsis, Glycine max, Oryza sativa, Zea mays, Physcomitrella patens, Chlamydomonas reinhardtii, and Saccharomyces cerevisiae. Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the <t>MEGA6</t> program (Tamura et al., 2013). B, Gene structure analysis of EVR1 and EVR1L1. Gene models were drawn as in Fig. 2A. The numbers of coding nucleotides in each exon were marked. C, An alignment of amino acid sequences of EVR1 and EVR1L1. The alignment was generated by the software ClustalW2 (Larkin et al., 2007).
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    The EVR1 gene family in Arabidopsis. A, Phylogenetic analysis of EVR1 and EVR1L proteins from Arabidopsis, Glycine max, Oryza sativa, Zea mays, Physcomitrella patens, Chlamydomonas reinhardtii, and Saccharomyces cerevisiae. Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the <t>MEGA6</t> program (Tamura et al., 2013). B, Gene structure analysis of EVR1 and EVR1L1. Gene models were drawn as in Fig. 2A. The numbers of coding nucleotides in each exon were marked. C, An alignment of amino acid sequences of EVR1 and EVR1L1. The alignment was generated by the software ClustalW2 (Larkin et al., 2007).
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    Image Search Results


    The EVR1 gene family in Arabidopsis. A, Phylogenetic analysis of EVR1 and EVR1L proteins from Arabidopsis, Glycine max, Oryza sativa, Zea mays, Physcomitrella patens, Chlamydomonas reinhardtii, and Saccharomyces cerevisiae. Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the MEGA6 program (Tamura et al., 2013). B, Gene structure analysis of EVR1 and EVR1L1. Gene models were drawn as in Fig. 2A. The numbers of coding nucleotides in each exon were marked. C, An alignment of amino acid sequences of EVR1 and EVR1L1. The alignment was generated by the software ClustalW2 (Larkin et al., 2007).

    Journal: Plant Physiology

    Article Title: Balance between Cytosolic and Chloroplast Translation Affects Leaf Variegation 1

    doi: 10.1104/pp.17.00673

    Figure Lengend Snippet: The EVR1 gene family in Arabidopsis. A, Phylogenetic analysis of EVR1 and EVR1L proteins from Arabidopsis, Glycine max, Oryza sativa, Zea mays, Physcomitrella patens, Chlamydomonas reinhardtii, and Saccharomyces cerevisiae. Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the MEGA6 program (Tamura et al., 2013). B, Gene structure analysis of EVR1 and EVR1L1. Gene models were drawn as in Fig. 2A. The numbers of coding nucleotides in each exon were marked. C, An alignment of amino acid sequences of EVR1 and EVR1L1. The alignment was generated by the software ClustalW2 (Larkin et al., 2007).

    Article Snippet: Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the MEGA6 program ( Tamura et al., 2013 ).

    Techniques: Construct, Generated, Software