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matlab dbscan function  (MathWorks Inc)


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    MathWorks Inc matlab dbscan function
    Cluster identification and classification workflow illustrated in a metastatic KM12L4a cell Individual localizations (ii) that make up the PALM-TIRF image (i) were clustered using the <t>DBSCAN</t> algorithm with minimum 17 <t>neighbors</t> <t>(MinPts)</t> and search radius (ε) 0.55. Retaining clusters with ≥50 localizations resulted in identification of individual clathrin clusters (iii). The designed cluster classification model (iv and v) classifies these as either a classical CCS (blue, indicated as CCP) or an alternative FCL (pink) based on 5 cluster-specific parameters (cluster area, number of localizations NrPts, eccentricity, perimeter, and the distance to the nearest neighboring cluster MinDistance) and a global threshold. Scale bars 5 μm, except scale bars of enlargements 1 μm.
    Matlab Dbscan Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/matlab+dbscan+function/pmc10393769-230-3-2
    Average 90 stars, based on 1 article reviews
    matlab dbscan function - by Bioz Stars, 2026-08
    90/100 stars

    Images

    1) Product Images from "Flat clathrin lattices are linked to metastatic potential in colorectal cancer"

    Article Title: Flat clathrin lattices are linked to metastatic potential in colorectal cancer

    Journal: iScience

    doi: 10.1016/j.isci.2023.107327

    Cluster identification and classification workflow illustrated in a metastatic KM12L4a cell Individual localizations (ii) that make up the PALM-TIRF image (i) were clustered using the DBSCAN algorithm with minimum 17 neighbors (MinPts) and search radius (ε) 0.55. Retaining clusters with ≥50 localizations resulted in identification of individual clathrin clusters (iii). The designed cluster classification model (iv and v) classifies these as either a classical CCS (blue, indicated as CCP) or an alternative FCL (pink) based on 5 cluster-specific parameters (cluster area, number of localizations NrPts, eccentricity, perimeter, and the distance to the nearest neighboring cluster MinDistance) and a global threshold. Scale bars 5 μm, except scale bars of enlargements 1 μm.
    Figure Legend Snippet: Cluster identification and classification workflow illustrated in a metastatic KM12L4a cell Individual localizations (ii) that make up the PALM-TIRF image (i) were clustered using the DBSCAN algorithm with minimum 17 neighbors (MinPts) and search radius (ε) 0.55. Retaining clusters with ≥50 localizations resulted in identification of individual clathrin clusters (iii). The designed cluster classification model (iv and v) classifies these as either a classical CCS (blue, indicated as CCP) or an alternative FCL (pink) based on 5 cluster-specific parameters (cluster area, number of localizations NrPts, eccentricity, perimeter, and the distance to the nearest neighboring cluster MinDistance) and a global threshold. Scale bars 5 μm, except scale bars of enlargements 1 μm.

    Techniques Used:


    Figure Legend Snippet:

    Techniques Used: Recombinant, Software, Imaging, Microscopy, Fluorescence



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    Cluster identification and classification workflow illustrated in a metastatic KM12L4a cell Individual localizations (ii) that make up the PALM-TIRF image (i) were clustered using the <t>DBSCAN</t> algorithm with minimum 17 <t>neighbors</t> <t>(MinPts)</t> and search radius (ε) 0.55. Retaining clusters with ≥50 localizations resulted in identification of individual clathrin clusters (iii). The designed cluster classification model (iv and v) classifies these as either a classical CCS (blue, indicated as CCP) or an alternative FCL (pink) based on 5 cluster-specific parameters (cluster area, number of localizations NrPts, eccentricity, perimeter, and the distance to the nearest neighboring cluster MinDistance) and a global threshold. Scale bars 5 μm, except scale bars of enlargements 1 μm.
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    dbscan implemented as matlab function  (MathWorks Inc)
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    Cluster identification and classification workflow illustrated in a metastatic KM12L4a cell Individual localizations (ii) that make up the PALM-TIRF image (i) were clustered using the <t>DBSCAN</t> algorithm with minimum 17 <t>neighbors</t> <t>(MinPts)</t> and search radius (ε) 0.55. Retaining clusters with ≥50 localizations resulted in identification of individual clathrin clusters (iii). The designed cluster classification model (iv and v) classifies these as either a classical CCS (blue, indicated as CCP) or an alternative FCL (pink) based on 5 cluster-specific parameters (cluster area, number of localizations NrPts, eccentricity, perimeter, and the distance to the nearest neighboring cluster MinDistance) and a global threshold. Scale bars 5 μm, except scale bars of enlargements 1 μm.
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    Image Search Results


    Cluster identification and classification workflow illustrated in a metastatic KM12L4a cell Individual localizations (ii) that make up the PALM-TIRF image (i) were clustered using the DBSCAN algorithm with minimum 17 neighbors (MinPts) and search radius (ε) 0.55. Retaining clusters with ≥50 localizations resulted in identification of individual clathrin clusters (iii). The designed cluster classification model (iv and v) classifies these as either a classical CCS (blue, indicated as CCP) or an alternative FCL (pink) based on 5 cluster-specific parameters (cluster area, number of localizations NrPts, eccentricity, perimeter, and the distance to the nearest neighboring cluster MinDistance) and a global threshold. Scale bars 5 μm, except scale bars of enlargements 1 μm.

    Journal: iScience

    Article Title: Flat clathrin lattices are linked to metastatic potential in colorectal cancer

    doi: 10.1016/j.isci.2023.107327

    Figure Lengend Snippet: Cluster identification and classification workflow illustrated in a metastatic KM12L4a cell Individual localizations (ii) that make up the PALM-TIRF image (i) were clustered using the DBSCAN algorithm with minimum 17 neighbors (MinPts) and search radius (ε) 0.55. Retaining clusters with ≥50 localizations resulted in identification of individual clathrin clusters (iii). The designed cluster classification model (iv and v) classifies these as either a classical CCS (blue, indicated as CCP) or an alternative FCL (pink) based on 5 cluster-specific parameters (cluster area, number of localizations NrPts, eccentricity, perimeter, and the distance to the nearest neighboring cluster MinDistance) and a global threshold. Scale bars 5 μm, except scale bars of enlargements 1 μm.

    Article Snippet: Then, the MATLAB DBSCAN function was executed for a minimum of 17 neighbors (MinPts) within a search radius (ε) of 0.55.

    Techniques:

    Journal: iScience

    Article Title: Flat clathrin lattices are linked to metastatic potential in colorectal cancer

    doi: 10.1016/j.isci.2023.107327

    Figure Lengend Snippet:

    Article Snippet: Then, the MATLAB DBSCAN function was executed for a minimum of 17 neighbors (MinPts) within a search radius (ε) of 0.55.

    Techniques: Recombinant, Software, Imaging, Microscopy, Fluorescence