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global screening array-24 v3.0 chip  (Illumina Inc)


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    Structured Review

    Illumina Inc global screening array-24 v3.0 chip
    Global Screening Array 24 V3.0 Chip, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/global+screening+array+chip/global+screening+array/pm39780311-23-16-23
    Average 90 stars, based on 1 article reviews
    global screening array-24 v3.0 chip - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    RNA Sequencing:

    Article Title: Aortic valve-specific genes dysregulated in calcific aortic valve stenosis as potential biomarkers and therapeutic targets
    Article Snippet: .. To match the inferred genotypes obtained from RNA-seq with the genotypes derived from blood samples using the Illumina Global Screening Array in the same individuals, we utilized the mbv function in QTLtools. ..

    Derivative Assay:

    Article Title: Aortic valve-specific genes dysregulated in calcific aortic valve stenosis as potential biomarkers and therapeutic targets
    Article Snippet: .. To match the inferred genotypes obtained from RNA-seq with the genotypes derived from blood samples using the Illumina Global Screening Array in the same individuals, we utilized the mbv function in QTLtools. ..

    other:

    Article Title: Germline genetic variation impacts clonal hematopoiesis landscape and progression to malignancy.
    Article Snippet: As of 15 February 2023, longitudinal health data were available for >287,000 participants through linkage to EHRs harmonized using the Observational Medical Outcomes Partnership Common Data Model. PCR-free DNA libraries were constructed using an Illumina Kapa HyperPrep kit and sequenced on the Illumina NovaSeq 6000 platform using 150-bp paired-end protocol to a mean depth of 30×.

    Article Title: The Consortium for Genomic Diversity, Ancestry, and Health in Colombia (CÓDIGO): building local capacity in genomics and bioinformatics
    Article Snippet: MCA , Mestizo Colombian from Antioquia , Antioquia , Universidad CES , 31591465, 34650589 , 624 , 526,935 , WGG , Illumina Global Screening Array.

    Article Title: Copy number variants and their implications for developmental and behavioural problems in cleft lip and/or palate.
    Article Snippet: These were all genotyped in the Illumina facility in Bristol Bioresource Laboratories, Bristol UK, using the Illumina Global Screening Array (GSA) ve rsion 3.

    Article Title: Characterization of the suicide attempt-associated chromosome 7 locus
    Article Snippet: We genotyped a sample of primarily French-Canadian individuals using the Illumina Global Screening array including the Psych 30K panel, which was performed at Genome Quebec.

    Article Title:
    Article Snippet: The third batch, comprising 17,949 individuals, was genotyped at ERASMUS MC (the Netherlands) using the Illumina Global Screening Array (Illumina, San Diego, USA) version 24 1.

    Sequencing:

    Article Title: Genetics of growth rate in induced pluripotent stem cells
    Article Snippet: We extracted DNA using the Promega Maxwell 96 gDNA Miniprep HT System following the manufacturer’s recommendations (Promega, Cat. #A2670, Madison, WI). .. We transferred DNA to AKESOgen for sequencing using the Illumina Global Screening Array and processed raw data using Illumina Genome Studio with reference genome GRCh37. .. We used three Illumina BeadChip arrays: InfiniumOmni2-5Exome-8v1-3 v1.3 (Illumina, Cat. #20031813, San Diego, CA), Infinium Global Screening Array-24 Kit (Illumina, Cat. #20030770), and Infinium HumanCore-24 v1.2 (Illumina, Cat. #20024566).



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    Genomic profiling of iPSC lines from African Somatic and Stem Cell Bank. A, Workflow. B–I, Genetic analyses of iPSC. B, PCA of common genetic variants measured in unique iPSC lines (gray, cohort) compared to 1000 Genomes reference: AFR, AMR, EAS, EUR, SAS. C, Frequency of APOE genotypes among iPSC lines. D–I, PRS. D–E, Distribution of PRS represented using reference (salmon, REF) and iPSC samples (cyan, TRG). G–H, Distribution of PRS represented based on Nigerian ethnic group. D, G, PRS for AD including the APOE gene locus. E, H, PRS for AD excluding the APOE gene locus. F, I, PRS for PD. J, PCA of transcriptomic data generated from iPSCs (500 most variable gene transcripts). K, XIST, expressed on the inactivated X‐chromosome, in iPSC lines. Graphs represent CPM mean ± SEM. ****, p < 0.0001. Blue, female. Red, male. AD, Alzheimer's disease; AFR, Africans; AMR, admixed Americans; APOE , apolipoprotein E; CPM, counts per million; EAS, East Asians; EUR, Europeans; <t>GWAS,</t> <t>genome‐wide</t> <t>association</t> <t>study;</t> iPSC, induced pluripotent stem cell; PCA, principal component analysis; PD, Parkinson's disease; PRS, polygenic risk score; REF, reference; SAS, South Asian; SEM, standard error of the mean.
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    Genomic profiling of iPSC lines from African Somatic and Stem Cell Bank. A, Workflow. B–I, Genetic analyses of iPSC. B, PCA of common genetic variants measured in unique iPSC lines (gray, cohort) compared to 1000 Genomes reference: AFR, AMR, EAS, EUR, SAS. C, Frequency of APOE genotypes among iPSC lines. D–I, PRS. D–E, Distribution of PRS represented using reference (salmon, REF) and iPSC samples (cyan, TRG). G–H, Distribution of PRS represented based on Nigerian ethnic group. D, G, PRS for AD including the APOE gene locus. E, H, PRS for AD excluding the APOE gene locus. F, I, PRS for PD. J, PCA of transcriptomic data generated from iPSCs (500 most variable gene transcripts). K, XIST, expressed on the inactivated X‐chromosome, in iPSC lines. Graphs represent CPM mean ± SEM. ****, p < 0.0001. Blue, female. Red, male. AD, Alzheimer's disease; AFR, Africans; AMR, admixed Americans; APOE , apolipoprotein E; CPM, counts per million; EAS, East Asians; EUR, Europeans; <t>GWAS,</t> <t>genome‐wide</t> <t>association</t> <t>study;</t> iPSC, induced pluripotent stem cell; PCA, principal component analysis; PD, Parkinson's disease; PRS, polygenic risk score; REF, reference; SAS, South Asian; SEM, standard error of the mean.
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    Genomic profiling of iPSC lines from African Somatic and Stem Cell Bank. A, Workflow. B–I, Genetic analyses of iPSC. B, PCA of common genetic variants measured in unique iPSC lines (gray, cohort) compared to 1000 Genomes reference: AFR, AMR, EAS, EUR, SAS. C, Frequency of APOE genotypes among iPSC lines. D–I, PRS. D–E, Distribution of PRS represented using reference (salmon, REF) and iPSC samples (cyan, TRG). G–H, Distribution of PRS represented based on Nigerian ethnic group. D, G, PRS for AD including the APOE gene locus. E, H, PRS for AD excluding the APOE gene locus. F, I, PRS for PD. J, PCA of transcriptomic data generated from iPSCs (500 most variable gene transcripts). K, XIST, expressed on the inactivated X‐chromosome, in iPSC lines. Graphs represent CPM mean ± SEM. ****, p < 0.0001. Blue, female. Red, male. AD, Alzheimer's disease; AFR, Africans; AMR, admixed Americans; APOE , apolipoprotein E; CPM, counts per million; EAS, East Asians; EUR, Europeans; <t>GWAS,</t> <t>genome‐wide</t> <t>association</t> <t>study;</t> iPSC, induced pluripotent stem cell; PCA, principal component analysis; PD, Parkinson's disease; PRS, polygenic risk score; REF, reference; SAS, South Asian; SEM, standard error of the mean.
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    Image Search Results


    Genomic profiling of iPSC lines from African Somatic and Stem Cell Bank. A, Workflow. B–I, Genetic analyses of iPSC. B, PCA of common genetic variants measured in unique iPSC lines (gray, cohort) compared to 1000 Genomes reference: AFR, AMR, EAS, EUR, SAS. C, Frequency of APOE genotypes among iPSC lines. D–I, PRS. D–E, Distribution of PRS represented using reference (salmon, REF) and iPSC samples (cyan, TRG). G–H, Distribution of PRS represented based on Nigerian ethnic group. D, G, PRS for AD including the APOE gene locus. E, H, PRS for AD excluding the APOE gene locus. F, I, PRS for PD. J, PCA of transcriptomic data generated from iPSCs (500 most variable gene transcripts). K, XIST, expressed on the inactivated X‐chromosome, in iPSC lines. Graphs represent CPM mean ± SEM. ****, p < 0.0001. Blue, female. Red, male. AD, Alzheimer's disease; AFR, Africans; AMR, admixed Americans; APOE , apolipoprotein E; CPM, counts per million; EAS, East Asians; EUR, Europeans; GWAS, genome‐wide association study; iPSC, induced pluripotent stem cell; PCA, principal component analysis; PD, Parkinson's disease; PRS, polygenic risk score; REF, reference; SAS, South Asian; SEM, standard error of the mean.

    Journal: Alzheimer's & Dementia

    Article Title: Somatic and Stem Cell Bank to study the contribution of African ancestry to dementia: African iPSC Initiative

    doi: 10.1002/alz.70145

    Figure Lengend Snippet: Genomic profiling of iPSC lines from African Somatic and Stem Cell Bank. A, Workflow. B–I, Genetic analyses of iPSC. B, PCA of common genetic variants measured in unique iPSC lines (gray, cohort) compared to 1000 Genomes reference: AFR, AMR, EAS, EUR, SAS. C, Frequency of APOE genotypes among iPSC lines. D–I, PRS. D–E, Distribution of PRS represented using reference (salmon, REF) and iPSC samples (cyan, TRG). G–H, Distribution of PRS represented based on Nigerian ethnic group. D, G, PRS for AD including the APOE gene locus. E, H, PRS for AD excluding the APOE gene locus. F, I, PRS for PD. J, PCA of transcriptomic data generated from iPSCs (500 most variable gene transcripts). K, XIST, expressed on the inactivated X‐chromosome, in iPSC lines. Graphs represent CPM mean ± SEM. ****, p < 0.0001. Blue, female. Red, male. AD, Alzheimer's disease; AFR, Africans; AMR, admixed Americans; APOE , apolipoprotein E; CPM, counts per million; EAS, East Asians; EUR, Europeans; GWAS, genome‐wide association study; iPSC, induced pluripotent stem cell; PCA, principal component analysis; PD, Parkinson's disease; PRS, polygenic risk score; REF, reference; SAS, South Asian; SEM, standard error of the mean.

    Article Snippet: Samples were analyzed by an Infinium Global Screening Array‐24 v.30 GWAS Chip.

    Techniques: Generated, GWAS