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massarray high-throughput dna analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry  (Sequenom)

 
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    Sequenom massarray high-throughput dna analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    Massarray High Throughput Dna Analysis With Matrix Assisted Laser Desorption/Ionization Time Of Flight Mass Spectrometry, supplied by Sequenom, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/dna+massarray/massarray+high+throughput+dna+analysis+with+matrix+assisted+laser+desorption+ionization+time+of+flight+mass+spectrometry/pmc08310949-80-13-19
    Average 90 stars, based on 1 article reviews
    massarray high-throughput dna analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    High Throughput Screening Assay:

    Article Title: Association between PKA gene polymorphism and NTDs in high risk Chinese population in Shanxi
    Article Snippet: Genotyping was conducted by an experienced technician who was blinded to the diagnosis using MassArray high-throughput DNA analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, San Diego, CA).

    Article Title: A Pharmacogenetics-Based Warfarin Maintenance Dosing Algorithm from Northern Chinese Patients
    Article Snippet: Genotyping was performed using the MassARRAY high-throughput DNA analysis system with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, Inc., San Diego, CA, USA).

    Article Title: The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
    Article Snippet: Genotyping in the CxA progeny was performed using iPLEX Gold technology [ ] and Mass ARRAY high-throughput DNA analysis mass spectrometry (Sequenom, Inc) at the Centre for Applied Biomedical Research (CRBA) of Bologna.

    Article Title: WNT3A rs752107(C > T) Polymorphism Is Associated With an Increased Risk of Essential Hypertension and Related Cardiovascular Diseases
    Article Snippet: In the exploration cohort, genotyping was performed using MassARRAY high-throughput DNA analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, Inc., San Diego, CA, USA).

    Article Title: Common polymorphisms in the adiponectin and its receptor genes, adiponectin levels and the risk of prostate cancer
    Article Snippet: Genotyping was performed using MassARRAY high-throughput DNA analysis with matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry (Sequenom, San Diego, CA, USA) and genotypes were called using the automated analysis SpectroTYPER-RT software.

    Article Title: An association study between SUFU gene polymorphisms and neural tube defects.
    Article Snippet: Neural tube defects (NTDs) in mammals are rooted in aberrant neural tube closure during early embryogenesis, which is caused by multiple environmental and genetic factors.. The Sonic Hedgehog pathway is involved in the induction of the floor plate and participates in formation of the neural tube.. Mutation of the suppressor of fused gene (SUFU), an essential repressor of Sonic Hedgehog signaling pathway, can result in NTDs.

    Article Title: TRPV1 polymorphisms and risk of interferon β-induced flu-like syndrome in patients with relapsing-remitting multiple sclerosis.
    Article Snippet: Article history: Received 24 November 2016 Received in revised form 17 January 2017 Accepted 6 February 2017 Interferon-β (IFN-β) is often discontinued in RRMS patients due to its most common side effect, the flu-like syndrome (FLS).. The mechanisms underlying IFN β-induced FLS symptoms are still unclear.. The endocannabinoid system (ECS) is a key regulator of pain and inflammation.

    Article Title: Association between PTCH1 polymorphisms and risk of neural tube defects in a Chinese population.
    Article Snippet: BACKGROUND: SHH signaling pathway plays an important role in the formation of the neural plate and is involved in the regulation of the dorsoventral (DV) axis of the neural tube.. Some neural tube defects (NTDs) may be caused through overactivation of the SHH signaling pathway.. The PTCH1 gene, encoding a negative regulator of SHH signaling, affects neural tube closure in animal models.

    Mass Spectrometry:

    Article Title: Association between PKA gene polymorphism and NTDs in high risk Chinese population in Shanxi
    Article Snippet: Genotyping was conducted by an experienced technician who was blinded to the diagnosis using MassArray high-throughput DNA analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, San Diego, CA).

    Article Title: A Pharmacogenetics-Based Warfarin Maintenance Dosing Algorithm from Northern Chinese Patients
    Article Snippet: Genotyping was performed using the MassARRAY high-throughput DNA analysis system with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, Inc., San Diego, CA, USA).

    Article Title: The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
    Article Snippet: Genotyping in the CxA progeny was performed using iPLEX Gold technology [ ] and Mass ARRAY high-throughput DNA analysis mass spectrometry (Sequenom, Inc) at the Centre for Applied Biomedical Research (CRBA) of Bologna.

    Article Title: WNT3A rs752107(C > T) Polymorphism Is Associated With an Increased Risk of Essential Hypertension and Related Cardiovascular Diseases
    Article Snippet: In the exploration cohort, genotyping was performed using MassARRAY high-throughput DNA analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, Inc., San Diego, CA, USA).

    Article Title: Common polymorphisms in the adiponectin and its receptor genes, adiponectin levels and the risk of prostate cancer
    Article Snippet: Genotyping was performed using MassARRAY high-throughput DNA analysis with matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry (Sequenom, San Diego, CA, USA) and genotypes were called using the automated analysis SpectroTYPER-RT software.

    Article Title: An association study between SUFU gene polymorphisms and neural tube defects.
    Article Snippet: Neural tube defects (NTDs) in mammals are rooted in aberrant neural tube closure during early embryogenesis, which is caused by multiple environmental and genetic factors.. The Sonic Hedgehog pathway is involved in the induction of the floor plate and participates in formation of the neural tube.. Mutation of the suppressor of fused gene (SUFU), an essential repressor of Sonic Hedgehog signaling pathway, can result in NTDs.

    Article Title: TRPV1 polymorphisms and risk of interferon β-induced flu-like syndrome in patients with relapsing-remitting multiple sclerosis.
    Article Snippet: Article history: Received 24 November 2016 Received in revised form 17 January 2017 Accepted 6 February 2017 Interferon-β (IFN-β) is often discontinued in RRMS patients due to its most common side effect, the flu-like syndrome (FLS).. The mechanisms underlying IFN β-induced FLS symptoms are still unclear.. The endocannabinoid system (ECS) is a key regulator of pain and inflammation.

    Article Title: Association between PTCH1 polymorphisms and risk of neural tube defects in a Chinese population.
    Article Snippet: BACKGROUND: SHH signaling pathway plays an important role in the formation of the neural plate and is involved in the regulation of the dorsoventral (DV) axis of the neural tube.. Some neural tube defects (NTDs) may be caused through overactivation of the SHH signaling pathway.. The PTCH1 gene, encoding a negative regulator of SHH signaling, affects neural tube closure in animal models.

    Biomarker Discovery:

    Article Title: Association between PKA gene polymorphism and NTDs in high risk Chinese population in Shanxi
    Article Snippet: Genotyping was conducted by an experienced technician who was blinded to the diagnosis using MassArray high-throughput DNA analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, San Diego, CA).

    Article Title: A Pharmacogenetics-Based Warfarin Maintenance Dosing Algorithm from Northern Chinese Patients
    Article Snippet: Genotyping was performed using the MassARRAY high-throughput DNA analysis system with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, Inc., San Diego, CA, USA).

    Article Title: The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
    Article Snippet: Genotyping in the CxA progeny was performed using iPLEX Gold technology [ ] and Mass ARRAY high-throughput DNA analysis mass spectrometry (Sequenom, Inc) at the Centre for Applied Biomedical Research (CRBA) of Bologna.

    Article Title: WNT3A rs752107(C > T) Polymorphism Is Associated With an Increased Risk of Essential Hypertension and Related Cardiovascular Diseases
    Article Snippet: In the exploration cohort, genotyping was performed using MassARRAY high-throughput DNA analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, Inc., San Diego, CA, USA).

    Article Title: Common polymorphisms in the adiponectin and its receptor genes, adiponectin levels and the risk of prostate cancer
    Article Snippet: Genotyping was performed using MassARRAY high-throughput DNA analysis with matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry (Sequenom, San Diego, CA, USA) and genotypes were called using the automated analysis SpectroTYPER-RT software.

    Article Title: An association study between SUFU gene polymorphisms and neural tube defects.
    Article Snippet: Neural tube defects (NTDs) in mammals are rooted in aberrant neural tube closure during early embryogenesis, which is caused by multiple environmental and genetic factors.. The Sonic Hedgehog pathway is involved in the induction of the floor plate and participates in formation of the neural tube.. Mutation of the suppressor of fused gene (SUFU), an essential repressor of Sonic Hedgehog signaling pathway, can result in NTDs.

    Article Title: TRPV1 polymorphisms and risk of interferon β-induced flu-like syndrome in patients with relapsing-remitting multiple sclerosis.
    Article Snippet: Article history: Received 24 November 2016 Received in revised form 17 January 2017 Accepted 6 February 2017 Interferon-β (IFN-β) is often discontinued in RRMS patients due to its most common side effect, the flu-like syndrome (FLS).. The mechanisms underlying IFN β-induced FLS symptoms are still unclear.. The endocannabinoid system (ECS) is a key regulator of pain and inflammation.

    Article Title: Association between PTCH1 polymorphisms and risk of neural tube defects in a Chinese population.
    Article Snippet: BACKGROUND: SHH signaling pathway plays an important role in the formation of the neural plate and is involved in the regulation of the dorsoventral (DV) axis of the neural tube.. Some neural tube defects (NTDs) may be caused through overactivation of the SHH signaling pathway.. The PTCH1 gene, encoding a negative regulator of SHH signaling, affects neural tube closure in animal models.

    Software:

    Article Title: Association between PKA gene polymorphism and NTDs in high risk Chinese population in Shanxi
    Article Snippet: Genotyping was conducted by an experienced technician who was blinded to the diagnosis using MassArray high-throughput DNA analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, San Diego, CA).

    Article Title: A Pharmacogenetics-Based Warfarin Maintenance Dosing Algorithm from Northern Chinese Patients
    Article Snippet: Genotyping was performed using the MassARRAY high-throughput DNA analysis system with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, Inc., San Diego, CA, USA).

    Article Title: The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
    Article Snippet: Genotyping in the CxA progeny was performed using iPLEX Gold technology [ ] and Mass ARRAY high-throughput DNA analysis mass spectrometry (Sequenom, Inc) at the Centre for Applied Biomedical Research (CRBA) of Bologna.

    Article Title: WNT3A rs752107(C > T) Polymorphism Is Associated With an Increased Risk of Essential Hypertension and Related Cardiovascular Diseases
    Article Snippet: In the exploration cohort, genotyping was performed using MassARRAY high-throughput DNA analysis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (Sequenom, Inc., San Diego, CA, USA).

    Article Title: Common polymorphisms in the adiponectin and its receptor genes, adiponectin levels and the risk of prostate cancer
    Article Snippet: Genotyping was performed using MassARRAY high-throughput DNA analysis with matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry (Sequenom, San Diego, CA, USA) and genotypes were called using the automated analysis SpectroTYPER-RT software.

    Article Title: An association study between SUFU gene polymorphisms and neural tube defects.
    Article Snippet: Neural tube defects (NTDs) in mammals are rooted in aberrant neural tube closure during early embryogenesis, which is caused by multiple environmental and genetic factors.. The Sonic Hedgehog pathway is involved in the induction of the floor plate and participates in formation of the neural tube.. Mutation of the suppressor of fused gene (SUFU), an essential repressor of Sonic Hedgehog signaling pathway, can result in NTDs.

    Article Title: TRPV1 polymorphisms and risk of interferon β-induced flu-like syndrome in patients with relapsing-remitting multiple sclerosis.
    Article Snippet: Article history: Received 24 November 2016 Received in revised form 17 January 2017 Accepted 6 February 2017 Interferon-β (IFN-β) is often discontinued in RRMS patients due to its most common side effect, the flu-like syndrome (FLS).. The mechanisms underlying IFN β-induced FLS symptoms are still unclear.. The endocannabinoid system (ECS) is a key regulator of pain and inflammation.

    Article Title: Association between PTCH1 polymorphisms and risk of neural tube defects in a Chinese population.
    Article Snippet: BACKGROUND: SHH signaling pathway plays an important role in the formation of the neural plate and is involved in the regulation of the dorsoventral (DV) axis of the neural tube.. Some neural tube defects (NTDs) may be caused through overactivation of the SHH signaling pathway.. The PTCH1 gene, encoding a negative regulator of SHH signaling, affects neural tube closure in animal models.



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    Sequenom massarray quantitative dna methylation analysis
    ZNF582-AS1 expression was regulated by <t>DNA</t> <t>methylation</t> in ccRCC. a Detection of CpG islands in ZNF582-AS1 promoter and design of MSP primers. The horizontal axis of the curved lines represents the input sequence of ZNF582-AS1, and the vertical axis of the curved lines represents GC percentage. TSS: Transcription Start Sites. b MSP analysis of ZNF582-AS1 promoter DNA methylation status in ccRCC cell lines. c MSP analysis of ZNF582-AS1 promoter DNA methylation status in ccRCC tissues. d Detection of 38 CpG sites in ZNF582-AS1 promoter. e Quantitative detection of DNA methylation level of 38 CpG sites in ZNF582-AS1 promoter using Sequenom <t>MassARRAY</t> quantitative DNA methylation analysis. f and g Comparison of the DNA methylation levels of 38 CpG sites in ccRCC and adjacent normal renal tissues. h Treatment with 5-aza-dC and TSA demethylated ZNF582-AS1 promoter and increased ZNF582-AS1 expression in OSRC2 and Caki-1 cells. T refers to Tumor tissue of ccRCC, N refers to Adjacent normal kidney tissue. M = Methylated, U = Unmethylated
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    Image Search Results


    ZNF582-AS1 expression was regulated by DNA methylation in ccRCC. a Detection of CpG islands in ZNF582-AS1 promoter and design of MSP primers. The horizontal axis of the curved lines represents the input sequence of ZNF582-AS1, and the vertical axis of the curved lines represents GC percentage. TSS: Transcription Start Sites. b MSP analysis of ZNF582-AS1 promoter DNA methylation status in ccRCC cell lines. c MSP analysis of ZNF582-AS1 promoter DNA methylation status in ccRCC tissues. d Detection of 38 CpG sites in ZNF582-AS1 promoter. e Quantitative detection of DNA methylation level of 38 CpG sites in ZNF582-AS1 promoter using Sequenom MassARRAY quantitative DNA methylation analysis. f and g Comparison of the DNA methylation levels of 38 CpG sites in ccRCC and adjacent normal renal tissues. h Treatment with 5-aza-dC and TSA demethylated ZNF582-AS1 promoter and increased ZNF582-AS1 expression in OSRC2 and Caki-1 cells. T refers to Tumor tissue of ccRCC, N refers to Adjacent normal kidney tissue. M = Methylated, U = Unmethylated

    Journal: Journal of Experimental & Clinical Cancer Research : CR

    Article Title: Downregulation of lncRNA ZNF582-AS1 due to DNA hypermethylation promotes clear cell renal cell carcinoma growth and metastasis by regulating the N(6)-methyladenosine modification of MT-RNR1

    doi: 10.1186/s13046-021-01889-8

    Figure Lengend Snippet: ZNF582-AS1 expression was regulated by DNA methylation in ccRCC. a Detection of CpG islands in ZNF582-AS1 promoter and design of MSP primers. The horizontal axis of the curved lines represents the input sequence of ZNF582-AS1, and the vertical axis of the curved lines represents GC percentage. TSS: Transcription Start Sites. b MSP analysis of ZNF582-AS1 promoter DNA methylation status in ccRCC cell lines. c MSP analysis of ZNF582-AS1 promoter DNA methylation status in ccRCC tissues. d Detection of 38 CpG sites in ZNF582-AS1 promoter. e Quantitative detection of DNA methylation level of 38 CpG sites in ZNF582-AS1 promoter using Sequenom MassARRAY quantitative DNA methylation analysis. f and g Comparison of the DNA methylation levels of 38 CpG sites in ccRCC and adjacent normal renal tissues. h Treatment with 5-aza-dC and TSA demethylated ZNF582-AS1 promoter and increased ZNF582-AS1 expression in OSRC2 and Caki-1 cells. T refers to Tumor tissue of ccRCC, N refers to Adjacent normal kidney tissue. M = Methylated, U = Unmethylated

    Article Snippet: TSS: Transcription Start Sites. b MSP analysis of ZNF582-AS1 promoter DNA methylation status in ccRCC cell lines. c MSP analysis of ZNF582-AS1 promoter DNA methylation status in ccRCC tissues. d Detection of 38 CpG sites in ZNF582-AS1 promoter. e Quantitative detection of DNA methylation level of 38 CpG sites in ZNF582-AS1 promoter using Sequenom MassARRAY quantitative DNA methylation analysis. f and g Comparison of the DNA methylation levels of 38 CpG sites in ccRCC and adjacent normal renal tissues. h Treatment with 5-aza-dC and TSA demethylated ZNF582-AS1 promoter and increased ZNF582-AS1 expression in OSRC2 and Caki-1 cells.

    Techniques: Expressing, DNA Methylation Assay, Sequencing, Comparison, Methylation