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compound 2 compound 1  (Biosynth Carbosynth)


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    Structured Review

    Biosynth Carbosynth compound 2 compound 1
    Compound 2 Compound 1, supplied by Biosynth Carbosynth, used in various techniques. Bioz Stars score: 99/100, based on 45 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/compounds/Compound/us09005906-990-9-20
    Average 99 stars, based on 45 article reviews
    compound 2 compound 1 - by Bioz Stars, 2026-09
    99/100 stars

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    Related Articles

    other:

    Article Title: Gut microbe-derived trimethylamine shapes circadian rhythms through the host receptor TAAR5
    Article Snippet: Chemical compound, drug , 2-Hydroxyhippuric acid , Carbosynth , #FH240191601 , LC/MS standard.

    Polymerase Chain Reaction:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    TA Cloning:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    Labeling:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    Recombinant:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    Sequencing:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    In Situ Hybridization:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    Fluorescence In Situ Hybridization:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    Amplification:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    Staining:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    Software:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    Single Cell:

    Article Title: In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate
    Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Strain, strain background (Mus musculus) C57BL/6 J The Jackson Laboratory Strain # 000664 PD 28, 35, or 65 days (Supplementary file 1) Chemical compound, drug (R)–3- methylcyclopentadecanone (muscone) Ambeed Cat# A275816 Chemical compound, drug 5- cyclohexadecenone (ambretone) TCI Ltd. Cat# C0874 Chemical compound, drug 2- (sec- Butyl)–4,5- dihydrothiazole (SBT) Ambeed Cat# A578012 Chemical compound, drug isoamyl acetate (IAA) TCI Ltd. Cat# A0033 Chemical compound, drug 8- cyclohexadecenone (globanone) Perfumer’s Apprentice Cat # ac- 1510- sz1 Hossain et al. eLife 2024;13:RP96152. .. DOI: https://doi.org/10.7554/eLife.96152 21 of 33 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Chemical compound, drug Cyclopentadecanol was fromTCI America Cat# C1528 Chemical compound, drug 5- ethynyl- 2 ́-deoxyuridine (EdU) Carbosynth Cat# NE08701 10 mg/mL in PBS; 50 mg EdU/kg mouse Commercial assay or kit Expand High Fidelity PCR System Roche Cat# 11732650001 Commercial assay or kit TOPO TA Cloning Kit, Dual Promoter ThermoFisher Cat# K460001 Commercial assay or kit DIG RNA Labeling Mix Roche Cat# 11277073910 Peptide, recombinant protein T7 RNA Polymerase NEB Cat# M0251L Peptide, recombinant protein Sp6 RNA Polymerase NEB Cat# M0207S Peptide, recombinant protein RQ1 RNase- Free DNase Promega Cat# M6101 Sequence- based reagent DIG- labeled RNA fluorescent in situ hybridization probes This paper Please see Supplementary file 2 FISH (1:750) Antibody Anti- Digoxigenin- POD, Fab fragments Roche Cat# 11207733910, RRID:AB_514500 FISH (1:1000) Commercial assay or kit Tyramide Signal Amplification Plus Fluorescein Kit Akoya Biosciences SKU NEL741001KT Chemical compound, drug Sulfo- Cyanine3 azide Lumiprobe Cat# A1330 EdU staining (4 μM) Software, algorithm Zen Blue software Zeiss Software, algorithm Imaris software Oxford Instruments version 10.2 Other Hibernate AB Complete medium BrainBits Cat# HAB100 Peptide, recombinant protein Papain BrainBits Cat# PAP Other Hibernate A- minus Calcium medium BrainBits Cat# HACA100 Other NbActiv1 neuronal culturing medium BrainBits Cat# NbActiv1- 100 Commercial assay or kit LIVE/DEAD Fixable Aqua Dead Cell Stain Kit Invitrogen Cat# L34957 Commercial assay or kit Chromium Single Cell 3' HT Kit v3.1 10 X Genomics PN- 1000348 Software, algorithm Cell Ranger software 10 X Genomics Version 8.0.1 Software, algorithm Loupe Browser software 10 X Genomics Version 8.0.0 Software, algorithm Prism software Graphpad Version 10 Continued Experimental model and subject details All procedures involving mice were carried out in accordance with NIH standards and approved by the University of Colorado Anschutz Medical Campus Institutional Animal Care and Use Committee (IACUC). ..

    Synthesized:

    Article Title: Development and comparison of single FLT3-inhibitors to dual FLT3/TAF1-inhibitors as an anti-leukemic approach.
    Article Snippet: Compound series of 3i-1244, 3i-1245, 3i-1246, 3i-1247 and 3i-1248 were synthesized by Enamine (Kyiv, Ukraine). .. Compound 3i-1103 was synthesized by the Faculty of Pharmacy, University of Helsinki [37] and reference compounds were obtained from commercial providers: GNE371 (Biosynth/Carbosynth), BAY299 (Tocris), Gilteritinib (ASP2215, Selleckchem) and Quizartinib (AC220, Selleckchem). ..

    Article Title: Development and comparison of single FLT3-inhibitors to dual FLT3/TAF1-inhibitors as an anti-leukemic approach
    Article Snippet: Compound series of 3i-1244, 3i-1245, 3i-1246, 3i-1247 and 3i-1248 were synthesized by Enamine (Kyiv, Ukraine). .. Compound 3i-1103 was synthesized by the Faculty of Pharmacy, University of Helsinki [ ] and reference compounds were obtained from commercial providers: GNE371 (Biosynth/Carbosynth), BAY299 (Tocris), Gilteritinib (ASP2215, Selleckchem) and Quizartinib (AC220, Selleckchem). ..

    Liposomes:

    Article Title: Targeting peptide to deliver a compound to oocytes
    Article Snippet: .. For example, when the protein transferrin (Tf) was used as a ligand and chemically conjugated to molecular compound such as toxins (FitzGerald et al., 1983), liposomes (Hege et al., 1989; Matthay et al., 1989) proteins (Wagner, Curiel and Cotten, 1994) or DNA (Stavridis and Psallidopoulos, 1982), these molecules were internalized into the cell via the transferrin receptor (TfR) and released into the cell cytoplasm in vitro and in vivo (Widera, Norouziyan and Shen, 2003; Vácha, Martinez-Veracoechea and Frenkel, 2011; Chen et al., 2013). ..

    In Vitro:

    Article Title: Targeting peptide to deliver a compound to oocytes
    Article Snippet: .. For example, when the protein transferrin (Tf) was used as a ligand and chemically conjugated to molecular compound such as toxins (FitzGerald et al., 1983), liposomes (Hege et al., 1989; Matthay et al., 1989) proteins (Wagner, Curiel and Cotten, 1994) or DNA (Stavridis and Psallidopoulos, 1982), these molecules were internalized into the cell via the transferrin receptor (TfR) and released into the cell cytoplasm in vitro and in vivo (Widera, Norouziyan and Shen, 2003; Vácha, Martinez-Veracoechea and Frenkel, 2011; Chen et al., 2013). ..

    In Vivo:

    Article Title: Targeting peptide to deliver a compound to oocytes
    Article Snippet: .. For example, when the protein transferrin (Tf) was used as a ligand and chemically conjugated to molecular compound such as toxins (FitzGerald et al., 1983), liposomes (Hege et al., 1989; Matthay et al., 1989) proteins (Wagner, Curiel and Cotten, 1994) or DNA (Stavridis and Psallidopoulos, 1982), these molecules were internalized into the cell via the transferrin receptor (TfR) and released into the cell cytoplasm in vitro and in vivo (Widera, Norouziyan and Shen, 2003; Vácha, Martinez-Veracoechea and Frenkel, 2011; Chen et al., 2013). ..



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    Screening of bottleneck reaction steps in the 1w–SmHBA operon by multienzyme catalysis. a, Schematic illustration of the reaction components. The in vitro reaction system consisted of crude cell extracts (CCE) from strains harboring the 1w–SmHBA plasmid as the basic catalytic source, supplemented with multienzyme-expressing strains carrying plasmids encoding 4–5, 2–3, or single heterologously expressed Cob enzymes to alter the enzyme composition in each reaction. b, Comparison of in <t>vitro</t> <t>HBA</t> production using CCE from strains H1, H2, and LvH0. Two-sided unpaired t -test is carried out between H1, H2, and LvH0. Unpaired t -test of data: H1 to H2, ∗∗∗∗, P < 0.0001 (t = 35.12); LvH0 to H2, ∗∗∗∗, P < 0.0001 (t = 30.84). c, In vitro HBA production using CCE from H21–H28 strains, each harboring an additional RcCob enzyme. Red bars indicate values higher than those of the H2 reactant, whereas blue bars indicate values lower than those of H2 reactant. Two-sided unpaired t -test is carried out between H1 to H21-28. Unpaired t -test of data:H2 to H21, ∗, P = 0.0227 (t = 3.605); H24 to H2, ∗∗∗∗, P < 0.0001 (t = 24.60); H27 to H2, ∗, P = 0.5363 (t = 0.6757). d, In vitro HBA production using CCE from H37–H44 strains, in which SmCob enzymes were replaced with the corresponding RcCob enzymes. Two-sided unpaired t -test is carried out between H1 to H37-44. Unpaired t -test of data:H37 to H2, ∗, P = 0.0145 (t = 4.129); H41 to H2, ∗, P = 0.0315 (t = 3.246); H42 to H2, ∗∗∗, P = 0.0003 (t = 11.66); H43 to H2, ∗, P = 0.0229 (t = 3.592); H44 to H2, ∗∗∗∗, P < 0.0001 (t = 15.76). e, Screening of reactions supplemented with crude cell extracts from strains heterologously expressing 4–5 Cob enzymes. HBA-A: CCE with pET28a–CobAIGJM; HBA-B: CCE with pACYCDuet-1–CobFKLH. Unpaired t -test of data: HBA-A 45 OD 600 to Control in HBA titer, ns, P = 0.0729 (t = 2.418); HBA-B 45 OD 600 to Control in HBA titer, ∗∗, P = 0.0029 (t = 6.502); HBA-A 45 OD 600 to Control in Urogen <t>III</t> titer, ∗∗, P = 0.0022 (t = 7.002); HBA-B 45 OD 600 to Control in Urogen III titer, ∗∗, P = 0.0011 (t = 8.309); f, Screening of reactions supplemented with crude cell extracts from strains heterologously expressing 2–3 Cob enzymes. AIG: CCE with pet28a-CobAIG; JM: CCE with pet28a-CobJM; FK: CCE with pet28a-CobFK; LH: CCE with pet28a-CobLH. Unpaired t -test of data: AIG 30 OD600 to Control in Urogen III titer, ∗∗∗, P = 0.0009 (t = 8.801); JM 30 OD600 to Control in Urogen III titer, ∗∗∗∗, P < 0.0001 (t = 24.39); FK 30 OD600 to Control in Urogen III titer, ∗, P = 0.0304 (t = 3.285); LH 30 OD600 to Control in Urogen III titer, ∗∗∗∗, P < 0.0001 (t = 15.93); g, Screening of reactions supplemented with CCE from strains heterologously expressing a single Cob enzyme. Unpaired t -test of data: CobA + to ori, ∗∗∗, P = 0.0002 (t = 13.95); CobI + to ori, ∗∗∗, P = 0.0005 (t = 10.57); CobG + to ori, ∗∗∗, P = 0.0003 (t = 12.00); CobJ + to ori, ∗∗∗, P = 0.0001 (t = 15.48); CobM + to ori, ∗∗∗, P = 0.0005 (t = 10.46); CobF + to ori, ∗∗∗∗, P < 0.0001 (t = 16.42); CobK + to ori, ∗∗∗, P = 0.0006 (t = 9.873); CobL + to ori, ∗∗, P = 0.0042 (t = 5.882); CobH + to ori, ∗∗∗, P = 0.001 (t = 8.675).
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    96
    MedChemExpress molecule compounds tepp 46
    Dose-responsive target-responsive accessibility profiling (TRAP) <t>identifies</t> <t>TEPP-46</t> targets in complex proteomes. (A) Volcano plots showing lysine accessibility changes in HeLa cell lysates. Each treatment group contained 100 μg of HeLa lysate and was treated with TEPP-46 at multiple concentrations (1 nM, 10 nM, 50 nM, 100 nM, 500 nM, 1 μM, 5 μM, and 10 μM), followed by ligand incubation for 1 h and TRAP labeling for 30 min, both performed at 25 °C. Thresholds were defined as TRAP ratio <0.5 or >2 with statistical significance assessed by one-way analysis of variance (ANOVA); ∗∗∗P < 0.001. (B) Dose-responsive accessibility changes at lysine residues K305/K311 of pyruvate kinase M2 (PKM2) upon TEPP-46 treatment, fitted using a four-parameter logistic (4 PL) model ( R 2 = 0.9951; n = 3 independent biological replicates). (C) Quantitative TRAP analysis of lysine-containing peptides within PKM2. Blue indicates TRAP peptides exhibiting the strongest accessibility changes, while cyan denotes peptides showing weaker or inconsistent changes ( n = 3 independent biological replicates). (D) Crystal structure of PKM2 (PDB: 3U2Z ) showing TEPP-46 (yellow) bound near the K305/K311 region. The TRAP-identified peptide segment exhibiting altered accessibility (K305/K311) is highlighted in blue, whereas non-responsive peptides are shown in cyan. PDB: protein data bank.
    Molecule Compounds Tepp 46, supplied by MedChemExpress, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Macklin Inc compounds pbt2
    Structures of <t>PBT2</t> (A) and PBT2 reduce the mRNA levels of TaSP and Tap104 (B). Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.
    Compounds Pbt2, supplied by Macklin Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    MedChemExpress reference compounds
    Structures of <t>PBT2</t> (A) and PBT2 reduce the mRNA levels of TaSP and Tap104 (B). Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.
    Reference Compounds, supplied by MedChemExpress, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    MedChemExpress compound c
    Structures of <t>PBT2</t> (A) and PBT2 reduce the mRNA levels of TaSP and Tap104 (B). Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.
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    Image Search Results


    Protective effect of rMyonectin against LPS-induced apoptosis in cardiomyocytes is mediated by AMPK activation. (A) Western blot analysis and semi-quantification of p-AMPK and AMPK in myocardial tissue. (B) Western blot analysis and semi-quantification of p-AMPK and AMPK in NMCMs. (C) Expression of p-AMPK and AMPK in NMCMs after CC treatment. (D) Intracellular LDH activity in NMCMs. (E) The percentage of apoptotic cells detected using flow cytometry. (F) Apoptosis was assessed using flow cytometry after double labeling with Annexin V-FITC and PI. (G) Western blot analysis and semi-quantification of cleaved caspase-3, caspase-3, Bax and Bcl-2 protein expression in NMCMs. The data are presented as mean±SEM. * P<0.05, ** P<0.01, *** P<0.001, **** P<0.0001. rMyonectin, recombinant myonectin; NMCMs, neonatal mouse cardiomyocytes; AMPK, AMP-activated protein kinase; CC, Compound C; LDH, lactate dehydrogenase; LPS, lipopolysaccharide; PI, propidium iodide; p-, phosphorylated.

    Journal: International Journal of Molecular Medicine

    Article Title: Recombinant myonectin ameliorates sepsis-induced cardiomyopathy by alleviating mitochondrial dysfunction via the AdipoR1/AMPK pathway

    doi: 10.3892/ijmm.2026.5900

    Figure Lengend Snippet: Protective effect of rMyonectin against LPS-induced apoptosis in cardiomyocytes is mediated by AMPK activation. (A) Western blot analysis and semi-quantification of p-AMPK and AMPK in myocardial tissue. (B) Western blot analysis and semi-quantification of p-AMPK and AMPK in NMCMs. (C) Expression of p-AMPK and AMPK in NMCMs after CC treatment. (D) Intracellular LDH activity in NMCMs. (E) The percentage of apoptotic cells detected using flow cytometry. (F) Apoptosis was assessed using flow cytometry after double labeling with Annexin V-FITC and PI. (G) Western blot analysis and semi-quantification of cleaved caspase-3, caspase-3, Bax and Bcl-2 protein expression in NMCMs. The data are presented as mean±SEM. * P<0.05, ** P<0.01, *** P<0.001, **** P<0.0001. rMyonectin, recombinant myonectin; NMCMs, neonatal mouse cardiomyocytes; AMPK, AMP-activated protein kinase; CC, Compound C; LDH, lactate dehydrogenase; LPS, lipopolysaccharide; PI, propidium iodide; p-, phosphorylated.

    Article Snippet: NMCMs were pretreated for 2 h with rMyonectin or with the AMPK inhibitor Compound C (CC; 10 μ M; cat. no. HY-13418A; MedChemExpress) ( , ), followed by stimulation with 10 μ g/ml LPS for 24 h ( ).

    Techniques: Activation Assay, Western Blot, Expressing, Activity Assay, Flow Cytometry, Labeling, Recombinant

    Protective effect of rMyonectin against LPS-induced mitochondrial dysfunction in cardiomyocytes is mediated by AMPK activation. (A) The ATP content in NMCMs. (B) Relative OCR. (C) Detection of the activities of mitochondrial respiratory chain complexes I and III. (D) Analysis of MMP using JC-1 staining. Scale bar, 50 μ m. (E) Western blot analysis and semi-quantification of PGC-1α, NRF1, TFAM, OPA1, Mfn2, p-Drp1 at Ser616, and Drp1 in NMCMs. The data are presented as mean±SEM. * P<0.05, ** P<0.01, *** P<0.001, **** P<0.0001. rMyonectin, recombinant myonectin; NMCMs, neonatal mouse cardiomyocytes; OCR, oxygen consumption rate; MMP, mitochondrial membrane potential; PGC-1α, peroxisome proliferator-activated receptor γ co-activator-1 α; NRF1, nuclear respiratory factor 1; TFAM, mitochondrial transcription factor A; Mfn2, mitofusin 2; OPA1, optic atrophy 1; Drp1, dynamin-related protein 1; LPS, lipopolysaccharide; p-, phosphorylated.

    Journal: International Journal of Molecular Medicine

    Article Title: Recombinant myonectin ameliorates sepsis-induced cardiomyopathy by alleviating mitochondrial dysfunction via the AdipoR1/AMPK pathway

    doi: 10.3892/ijmm.2026.5900

    Figure Lengend Snippet: Protective effect of rMyonectin against LPS-induced mitochondrial dysfunction in cardiomyocytes is mediated by AMPK activation. (A) The ATP content in NMCMs. (B) Relative OCR. (C) Detection of the activities of mitochondrial respiratory chain complexes I and III. (D) Analysis of MMP using JC-1 staining. Scale bar, 50 μ m. (E) Western blot analysis and semi-quantification of PGC-1α, NRF1, TFAM, OPA1, Mfn2, p-Drp1 at Ser616, and Drp1 in NMCMs. The data are presented as mean±SEM. * P<0.05, ** P<0.01, *** P<0.001, **** P<0.0001. rMyonectin, recombinant myonectin; NMCMs, neonatal mouse cardiomyocytes; OCR, oxygen consumption rate; MMP, mitochondrial membrane potential; PGC-1α, peroxisome proliferator-activated receptor γ co-activator-1 α; NRF1, nuclear respiratory factor 1; TFAM, mitochondrial transcription factor A; Mfn2, mitofusin 2; OPA1, optic atrophy 1; Drp1, dynamin-related protein 1; LPS, lipopolysaccharide; p-, phosphorylated.

    Article Snippet: NMCMs were pretreated for 2 h with rMyonectin or with the AMPK inhibitor Compound C (CC; 10 μ M; cat. no. HY-13418A; MedChemExpress) ( , ), followed by stimulation with 10 μ g/ml LPS for 24 h ( ).

    Techniques: Activation Assay, Staining, Western Blot, Recombinant, Membrane

    AdipoR1 knockdown abolishes the protective effect of rMyonectin against LPS-induced apoptosis in cardiomyocytes. (A) Western blot analysis and semi-quantification of AdipoR1 in myocardial tissue. (B) Western blot analysis and semi-quantification of AdipoR1 in NMCMs. (C) Representative western blots showing the expression of AdipoR1, p-AMPK and AMPK in NMCMs following AdipoR1 knockdown. (D) Semi-quantification of AdipoR1, p-AMPK and AMPK protein levels in NMCMs following AdipoR1 knockdown. (E) Intracellular LDH activity in NMCMs. (F) The percentage of apoptotic cells detected using flow cytometry. (G) Apoptosis was assessed using flow cytometry after double labeling with Annexin V-FITC and PI. (H) Western blot analysis and semi-quantification of cleaved caspase-3, caspase-3, Bax, and Bcl-2 protein expression in NMCMs. The data are presented as mean±SEM. * P<0.05, ** P<0.01, *** P<0.001, **** P<0.0001. rMyonectin, recombinant myonectin; NMCMs, neonatal mouse cardiomyocytes; AdipoR1, adiponectin receptor 1; AMPK, AMP-activated protein kinase; LDH, lactate dehydrogenase; si, small interfering RNA; NC, negative control; siAdipoR1, siRNA targeting AdipoR1; LPS, lipopolysaccharide; p-, phosphorylated; PI, propidium iodide.

    Journal: International Journal of Molecular Medicine

    Article Title: Recombinant myonectin ameliorates sepsis-induced cardiomyopathy by alleviating mitochondrial dysfunction via the AdipoR1/AMPK pathway

    doi: 10.3892/ijmm.2026.5900

    Figure Lengend Snippet: AdipoR1 knockdown abolishes the protective effect of rMyonectin against LPS-induced apoptosis in cardiomyocytes. (A) Western blot analysis and semi-quantification of AdipoR1 in myocardial tissue. (B) Western blot analysis and semi-quantification of AdipoR1 in NMCMs. (C) Representative western blots showing the expression of AdipoR1, p-AMPK and AMPK in NMCMs following AdipoR1 knockdown. (D) Semi-quantification of AdipoR1, p-AMPK and AMPK protein levels in NMCMs following AdipoR1 knockdown. (E) Intracellular LDH activity in NMCMs. (F) The percentage of apoptotic cells detected using flow cytometry. (G) Apoptosis was assessed using flow cytometry after double labeling with Annexin V-FITC and PI. (H) Western blot analysis and semi-quantification of cleaved caspase-3, caspase-3, Bax, and Bcl-2 protein expression in NMCMs. The data are presented as mean±SEM. * P<0.05, ** P<0.01, *** P<0.001, **** P<0.0001. rMyonectin, recombinant myonectin; NMCMs, neonatal mouse cardiomyocytes; AdipoR1, adiponectin receptor 1; AMPK, AMP-activated protein kinase; LDH, lactate dehydrogenase; si, small interfering RNA; NC, negative control; siAdipoR1, siRNA targeting AdipoR1; LPS, lipopolysaccharide; p-, phosphorylated; PI, propidium iodide.

    Article Snippet: NMCMs were pretreated for 2 h with rMyonectin or with the AMPK inhibitor Compound C (CC; 10 μ M; cat. no. HY-13418A; MedChemExpress) ( , ), followed by stimulation with 10 μ g/ml LPS for 24 h ( ).

    Techniques: Knockdown, Western Blot, Expressing, Activity Assay, Flow Cytometry, Labeling, Recombinant, Small Interfering RNA, Negative Control

    AdipoR1 knockdown abolishes the protective effect of rMyonectin against LPS-induced mitochondrial dysfunction in cardiomyocytes. (A) The ATP content in NMCMs. (B) Relative OCR. (C) Detection of the activities of mitochondrial respiratory chain complexes I and III. (D) Analysis of MMP using JC-1 staining. Scale bar, 50 μ m. (E) Western blot analysis and semi-quantification of PGC-1α, NRF1, TFAM, OPA1, Mfn2, p-Drp1 at Ser616 and Drp1 in NMCMs. The data are presented as mean±SEM. * P<0.05, ** P<0.01, *** P<0.001, **** P<0.0001. rMyonectin, recombinant myonectin; NMCMs, neonatal mouse cardiomyocytes; AdipoR1, adiponectin receptor 1; AMPK, AMP-activated protein kinase; OCR, oxygen consumption rate; MMP, mitochondrial membrane potential; PGC-1α, peroxisome proliferator-activated receptor γ co-activator-1 α; NRF1, nuclear respiratory factor 1; TFAM, mitochondrial transcription factor A; Mfn2, mitofusin 2; OPA1, optic atrophy 1; Drp1, dynamin-related protein 1; si, small interfering RNA; NC, negative control; siAdipoR1, siRNA targeting AdipoR1; LPS, lipopolysaccharide; p-, phosphorylated.

    Journal: International Journal of Molecular Medicine

    Article Title: Recombinant myonectin ameliorates sepsis-induced cardiomyopathy by alleviating mitochondrial dysfunction via the AdipoR1/AMPK pathway

    doi: 10.3892/ijmm.2026.5900

    Figure Lengend Snippet: AdipoR1 knockdown abolishes the protective effect of rMyonectin against LPS-induced mitochondrial dysfunction in cardiomyocytes. (A) The ATP content in NMCMs. (B) Relative OCR. (C) Detection of the activities of mitochondrial respiratory chain complexes I and III. (D) Analysis of MMP using JC-1 staining. Scale bar, 50 μ m. (E) Western blot analysis and semi-quantification of PGC-1α, NRF1, TFAM, OPA1, Mfn2, p-Drp1 at Ser616 and Drp1 in NMCMs. The data are presented as mean±SEM. * P<0.05, ** P<0.01, *** P<0.001, **** P<0.0001. rMyonectin, recombinant myonectin; NMCMs, neonatal mouse cardiomyocytes; AdipoR1, adiponectin receptor 1; AMPK, AMP-activated protein kinase; OCR, oxygen consumption rate; MMP, mitochondrial membrane potential; PGC-1α, peroxisome proliferator-activated receptor γ co-activator-1 α; NRF1, nuclear respiratory factor 1; TFAM, mitochondrial transcription factor A; Mfn2, mitofusin 2; OPA1, optic atrophy 1; Drp1, dynamin-related protein 1; si, small interfering RNA; NC, negative control; siAdipoR1, siRNA targeting AdipoR1; LPS, lipopolysaccharide; p-, phosphorylated.

    Article Snippet: NMCMs were pretreated for 2 h with rMyonectin or with the AMPK inhibitor Compound C (CC; 10 μ M; cat. no. HY-13418A; MedChemExpress) ( , ), followed by stimulation with 10 μ g/ml LPS for 24 h ( ).

    Techniques: Knockdown, Staining, Western Blot, Recombinant, Membrane, Small Interfering RNA, Negative Control

    Molecular mechanism by which rMyonectin ameliorates SIC. rMyonectin ameliorates SIC by alleviating mitochondrial dysfunction and inhibiting cardiomyocyte apoptosis via activation of the AdipoR1/AMPK pathway. rMyonectin, recombinant myonectin; SIC, sepsis-induced cardiomyopathy; OMM, outer mitochondrial membranes; IMM, inner mitochondrial membranes; AdipoR1, adiponectin receptor 1; AMPK, AMP-activated protein kinase; PGC-1α, peroxisome proliferator-activated receptor γ co-activator-1 α; NRF1, nuclear respiratory factor 1; TFAM, mitochondrial transcription factor A; Mfn2, mitofusin 2; OPA1, optic atrophy 1; Drp1, dynamin-related protein 1; I, mitochondrial respiratory chain complex I; III, mitochondrial respiratory chain complex III; p-, phosphorylated.

    Journal: International Journal of Molecular Medicine

    Article Title: Recombinant myonectin ameliorates sepsis-induced cardiomyopathy by alleviating mitochondrial dysfunction via the AdipoR1/AMPK pathway

    doi: 10.3892/ijmm.2026.5900

    Figure Lengend Snippet: Molecular mechanism by which rMyonectin ameliorates SIC. rMyonectin ameliorates SIC by alleviating mitochondrial dysfunction and inhibiting cardiomyocyte apoptosis via activation of the AdipoR1/AMPK pathway. rMyonectin, recombinant myonectin; SIC, sepsis-induced cardiomyopathy; OMM, outer mitochondrial membranes; IMM, inner mitochondrial membranes; AdipoR1, adiponectin receptor 1; AMPK, AMP-activated protein kinase; PGC-1α, peroxisome proliferator-activated receptor γ co-activator-1 α; NRF1, nuclear respiratory factor 1; TFAM, mitochondrial transcription factor A; Mfn2, mitofusin 2; OPA1, optic atrophy 1; Drp1, dynamin-related protein 1; I, mitochondrial respiratory chain complex I; III, mitochondrial respiratory chain complex III; p-, phosphorylated.

    Article Snippet: NMCMs were pretreated for 2 h with rMyonectin or with the AMPK inhibitor Compound C (CC; 10 μ M; cat. no. HY-13418A; MedChemExpress) ( , ), followed by stimulation with 10 μ g/ml LPS for 24 h ( ).

    Techniques: Activation Assay, Recombinant

    Reaction schemes and LC-MS analysis of Pp UGTs reactions with diosgenin and pennogenin . ( a ) Biosynthesis of trillin mediated by UGT91BP2 and UGT703R1–3 through transferring glucose from UDP-glucose to the C-3 OH position of diosgenin. ( b ) Extracted ion chromatograms (EICs) of the in vitro enzyme activity assays of recombinant UGT91BP2 and UGT703R1–3 with UDP-glucose and diosgenin showing the formation of trillin, as compared to the authentic trillin standard. Control is the empty expression vector. ( c ) MS spectra of the enzymatic reaction products in hydrogen and sodium ion adducts compared to the fragmentation pattern of the trillin standard. The product molecular ions [M + H] + and [M +Na] + and the feature fragment ion [M + H − Glc] + with m / z 415.32 are marked. Of note, additional peaks observed in the diosgenin EIC ( m / z 415.32) for UGT703R1–3 might correspond to substrate isomeric impurities, in-source adducts, or minor non-enzymatic by-products; these peaks, which arose from the extracted ion flow of the substrate m / z , did not co-elute with the product, trillin , and therefore did not affect the interpretation of the product formation. ( d ) Biosynthesis of pennogenin 3- O -glucoside mediated by the UGT703R1–3 through transferring glucose from UDP-glucose to the C-3 OH position of pennogenin. ( e ) EICs of the in vitro enzyme activity assays of recombinant UGT91BP2 and UGT703R1–3 with UDP-glucose and pennogenin showing the formation of pennogenin 3- O -glucoside, compared to the control empty expression vector. ( f ) MS/MS spectra ([M + H – Glc] + and [M + H – Glc − H 2 O] + ) of the enzymatic reaction products.

    Journal: Synthetic and Systems Biotechnology

    Article Title: Functional characterization of four glycosyltransferases for biosynthesis of steroidal saponins in medicinal plant Paris polyphylla

    doi: 10.1016/j.synbio.2026.04.002

    Figure Lengend Snippet: Reaction schemes and LC-MS analysis of Pp UGTs reactions with diosgenin and pennogenin . ( a ) Biosynthesis of trillin mediated by UGT91BP2 and UGT703R1–3 through transferring glucose from UDP-glucose to the C-3 OH position of diosgenin. ( b ) Extracted ion chromatograms (EICs) of the in vitro enzyme activity assays of recombinant UGT91BP2 and UGT703R1–3 with UDP-glucose and diosgenin showing the formation of trillin, as compared to the authentic trillin standard. Control is the empty expression vector. ( c ) MS spectra of the enzymatic reaction products in hydrogen and sodium ion adducts compared to the fragmentation pattern of the trillin standard. The product molecular ions [M + H] + and [M +Na] + and the feature fragment ion [M + H − Glc] + with m / z 415.32 are marked. Of note, additional peaks observed in the diosgenin EIC ( m / z 415.32) for UGT703R1–3 might correspond to substrate isomeric impurities, in-source adducts, or minor non-enzymatic by-products; these peaks, which arose from the extracted ion flow of the substrate m / z , did not co-elute with the product, trillin , and therefore did not affect the interpretation of the product formation. ( d ) Biosynthesis of pennogenin 3- O -glucoside mediated by the UGT703R1–3 through transferring glucose from UDP-glucose to the C-3 OH position of pennogenin. ( e ) EICs of the in vitro enzyme activity assays of recombinant UGT91BP2 and UGT703R1–3 with UDP-glucose and pennogenin showing the formation of pennogenin 3- O -glucoside, compared to the control empty expression vector. ( f ) MS/MS spectra ([M + H – Glc] + and [M + H – Glc − H 2 O] + ) of the enzymatic reaction products.

    Article Snippet: Diosgenin, pennogenin, and trillin standard compounds were purchased from Chengdu Push Biotechnology Co., Ltd., and Shanghai Yuanye Biotechnology Co., Ltd. (China).

    Techniques: Liquid Chromatography with Mass Spectroscopy, Transferring, In Vitro, Activity Assay, Recombinant, Control, Expressing, Plasmid Preparation, Tandem Mass Spectroscopy

    Transient expression and characterization of Pp UGTs in Nicotiana benthamiana . ( a ) UHPLC-MS traces of the trillin formation in N. benthamiana leaf extracts transiently expressing UGT91BP2 and UGT703R1–3 with the infiltration of diosgenin substrate, compared to trillin authentic standard and empty vector control. Q1: parent ion; Q3: daughter ion. ( b ) Confocal microscopic images of the localization of UGT91BP2-GFP, UGT703R1-GFP, UGT703R2-GFP and UGT703R3-GFP in N. benthamiana leaves. DAPI (a nuclear-specific fluorescence dye) acts as a nucleus indicator. Scale bars, 20 μm. The experiments were repeated two times with similar results.

    Journal: Synthetic and Systems Biotechnology

    Article Title: Functional characterization of four glycosyltransferases for biosynthesis of steroidal saponins in medicinal plant Paris polyphylla

    doi: 10.1016/j.synbio.2026.04.002

    Figure Lengend Snippet: Transient expression and characterization of Pp UGTs in Nicotiana benthamiana . ( a ) UHPLC-MS traces of the trillin formation in N. benthamiana leaf extracts transiently expressing UGT91BP2 and UGT703R1–3 with the infiltration of diosgenin substrate, compared to trillin authentic standard and empty vector control. Q1: parent ion; Q3: daughter ion. ( b ) Confocal microscopic images of the localization of UGT91BP2-GFP, UGT703R1-GFP, UGT703R2-GFP and UGT703R3-GFP in N. benthamiana leaves. DAPI (a nuclear-specific fluorescence dye) acts as a nucleus indicator. Scale bars, 20 μm. The experiments were repeated two times with similar results.

    Article Snippet: Diosgenin, pennogenin, and trillin standard compounds were purchased from Chengdu Push Biotechnology Co., Ltd., and Shanghai Yuanye Biotechnology Co., Ltd. (China).

    Techniques: Expressing, Plasmid Preparation, Control, Fluorescence

    Screening of bottleneck reaction steps in the 1w–SmHBA operon by multienzyme catalysis. a, Schematic illustration of the reaction components. The in vitro reaction system consisted of crude cell extracts (CCE) from strains harboring the 1w–SmHBA plasmid as the basic catalytic source, supplemented with multienzyme-expressing strains carrying plasmids encoding 4–5, 2–3, or single heterologously expressed Cob enzymes to alter the enzyme composition in each reaction. b, Comparison of in vitro HBA production using CCE from strains H1, H2, and LvH0. Two-sided unpaired t -test is carried out between H1, H2, and LvH0. Unpaired t -test of data: H1 to H2, ∗∗∗∗, P < 0.0001 (t = 35.12); LvH0 to H2, ∗∗∗∗, P < 0.0001 (t = 30.84). c, In vitro HBA production using CCE from H21–H28 strains, each harboring an additional RcCob enzyme. Red bars indicate values higher than those of the H2 reactant, whereas blue bars indicate values lower than those of H2 reactant. Two-sided unpaired t -test is carried out between H1 to H21-28. Unpaired t -test of data:H2 to H21, ∗, P = 0.0227 (t = 3.605); H24 to H2, ∗∗∗∗, P < 0.0001 (t = 24.60); H27 to H2, ∗, P = 0.5363 (t = 0.6757). d, In vitro HBA production using CCE from H37–H44 strains, in which SmCob enzymes were replaced with the corresponding RcCob enzymes. Two-sided unpaired t -test is carried out between H1 to H37-44. Unpaired t -test of data:H37 to H2, ∗, P = 0.0145 (t = 4.129); H41 to H2, ∗, P = 0.0315 (t = 3.246); H42 to H2, ∗∗∗, P = 0.0003 (t = 11.66); H43 to H2, ∗, P = 0.0229 (t = 3.592); H44 to H2, ∗∗∗∗, P < 0.0001 (t = 15.76). e, Screening of reactions supplemented with crude cell extracts from strains heterologously expressing 4–5 Cob enzymes. HBA-A: CCE with pET28a–CobAIGJM; HBA-B: CCE with pACYCDuet-1–CobFKLH. Unpaired t -test of data: HBA-A 45 OD 600 to Control in HBA titer, ns, P = 0.0729 (t = 2.418); HBA-B 45 OD 600 to Control in HBA titer, ∗∗, P = 0.0029 (t = 6.502); HBA-A 45 OD 600 to Control in Urogen III titer, ∗∗, P = 0.0022 (t = 7.002); HBA-B 45 OD 600 to Control in Urogen III titer, ∗∗, P = 0.0011 (t = 8.309); f, Screening of reactions supplemented with crude cell extracts from strains heterologously expressing 2–3 Cob enzymes. AIG: CCE with pet28a-CobAIG; JM: CCE with pet28a-CobJM; FK: CCE with pet28a-CobFK; LH: CCE with pet28a-CobLH. Unpaired t -test of data: AIG 30 OD600 to Control in Urogen III titer, ∗∗∗, P = 0.0009 (t = 8.801); JM 30 OD600 to Control in Urogen III titer, ∗∗∗∗, P < 0.0001 (t = 24.39); FK 30 OD600 to Control in Urogen III titer, ∗, P = 0.0304 (t = 3.285); LH 30 OD600 to Control in Urogen III titer, ∗∗∗∗, P < 0.0001 (t = 15.93); g, Screening of reactions supplemented with CCE from strains heterologously expressing a single Cob enzyme. Unpaired t -test of data: CobA + to ori, ∗∗∗, P = 0.0002 (t = 13.95); CobI + to ori, ∗∗∗, P = 0.0005 (t = 10.57); CobG + to ori, ∗∗∗, P = 0.0003 (t = 12.00); CobJ + to ori, ∗∗∗, P = 0.0001 (t = 15.48); CobM + to ori, ∗∗∗, P = 0.0005 (t = 10.46); CobF + to ori, ∗∗∗∗, P < 0.0001 (t = 16.42); CobK + to ori, ∗∗∗, P = 0.0006 (t = 9.873); CobL + to ori, ∗∗, P = 0.0042 (t = 5.882); CobH + to ori, ∗∗∗, P = 0.001 (t = 8.675).

    Journal: Synthetic and Systems Biotechnology

    Article Title: Reconstructing the hydrogenobyrinic acid synthetic toolkit by combining cell-free systems and metabolic engineering

    doi: 10.1016/j.synbio.2026.01.012

    Figure Lengend Snippet: Screening of bottleneck reaction steps in the 1w–SmHBA operon by multienzyme catalysis. a, Schematic illustration of the reaction components. The in vitro reaction system consisted of crude cell extracts (CCE) from strains harboring the 1w–SmHBA plasmid as the basic catalytic source, supplemented with multienzyme-expressing strains carrying plasmids encoding 4–5, 2–3, or single heterologously expressed Cob enzymes to alter the enzyme composition in each reaction. b, Comparison of in vitro HBA production using CCE from strains H1, H2, and LvH0. Two-sided unpaired t -test is carried out between H1, H2, and LvH0. Unpaired t -test of data: H1 to H2, ∗∗∗∗, P < 0.0001 (t = 35.12); LvH0 to H2, ∗∗∗∗, P < 0.0001 (t = 30.84). c, In vitro HBA production using CCE from H21–H28 strains, each harboring an additional RcCob enzyme. Red bars indicate values higher than those of the H2 reactant, whereas blue bars indicate values lower than those of H2 reactant. Two-sided unpaired t -test is carried out between H1 to H21-28. Unpaired t -test of data:H2 to H21, ∗, P = 0.0227 (t = 3.605); H24 to H2, ∗∗∗∗, P < 0.0001 (t = 24.60); H27 to H2, ∗, P = 0.5363 (t = 0.6757). d, In vitro HBA production using CCE from H37–H44 strains, in which SmCob enzymes were replaced with the corresponding RcCob enzymes. Two-sided unpaired t -test is carried out between H1 to H37-44. Unpaired t -test of data:H37 to H2, ∗, P = 0.0145 (t = 4.129); H41 to H2, ∗, P = 0.0315 (t = 3.246); H42 to H2, ∗∗∗, P = 0.0003 (t = 11.66); H43 to H2, ∗, P = 0.0229 (t = 3.592); H44 to H2, ∗∗∗∗, P < 0.0001 (t = 15.76). e, Screening of reactions supplemented with crude cell extracts from strains heterologously expressing 4–5 Cob enzymes. HBA-A: CCE with pET28a–CobAIGJM; HBA-B: CCE with pACYCDuet-1–CobFKLH. Unpaired t -test of data: HBA-A 45 OD 600 to Control in HBA titer, ns, P = 0.0729 (t = 2.418); HBA-B 45 OD 600 to Control in HBA titer, ∗∗, P = 0.0029 (t = 6.502); HBA-A 45 OD 600 to Control in Urogen III titer, ∗∗, P = 0.0022 (t = 7.002); HBA-B 45 OD 600 to Control in Urogen III titer, ∗∗, P = 0.0011 (t = 8.309); f, Screening of reactions supplemented with crude cell extracts from strains heterologously expressing 2–3 Cob enzymes. AIG: CCE with pet28a-CobAIG; JM: CCE with pet28a-CobJM; FK: CCE with pet28a-CobFK; LH: CCE with pet28a-CobLH. Unpaired t -test of data: AIG 30 OD600 to Control in Urogen III titer, ∗∗∗, P = 0.0009 (t = 8.801); JM 30 OD600 to Control in Urogen III titer, ∗∗∗∗, P < 0.0001 (t = 24.39); FK 30 OD600 to Control in Urogen III titer, ∗, P = 0.0304 (t = 3.285); LH 30 OD600 to Control in Urogen III titer, ∗∗∗∗, P < 0.0001 (t = 15.93); g, Screening of reactions supplemented with CCE from strains heterologously expressing a single Cob enzyme. Unpaired t -test of data: CobA + to ori, ∗∗∗, P = 0.0002 (t = 13.95); CobI + to ori, ∗∗∗, P = 0.0005 (t = 10.57); CobG + to ori, ∗∗∗, P = 0.0003 (t = 12.00); CobJ + to ori, ∗∗∗, P = 0.0001 (t = 15.48); CobM + to ori, ∗∗∗, P = 0.0005 (t = 10.46); CobF + to ori, ∗∗∗∗, P < 0.0001 (t = 16.42); CobK + to ori, ∗∗∗, P = 0.0006 (t = 9.873); CobL + to ori, ∗∗, P = 0.0042 (t = 5.882); CobH + to ori, ∗∗∗, P = 0.001 (t = 8.675).

    Article Snippet: A representative example is the HBA synthetic pathway: after the porphyrin ring compound Urogen III is assembled, nine successive enzymatic reactions modify the macrocycle by introducing eight methyl groups and removing a methylene bridge, thereby altering its symmetry.

    Techniques: In Vitro, Plasmid Preparation, Expressing, Comparison, Control

    Optimization of the artificial HBA operon. a, In vitro HBA production using CCE from various strains under different modifications. promoter replacement (H2 vs. H46 and H47, trc or tac promoters): Two-sided unpaired t -test is carried out between H2 to H46 and H47. Unpaired t -test of data: H46 to H2, ∗∗∗∗, P < 0.0001 (t = 23.77); H47 to H2, ∗∗∗∗, P < 0.0001 (t = 33.93); chassis variation (H2 vs. H48–H52, different E. coli strains harboring the SmHBA plasmid): Two-sided unpaired t -test is carried out between H2 to H48-52, but no significant differences were observed; culture medium effects (H2 grown in different media): Unpaired t -test of data: 2YT to LB, ∗, P = 0.0168 (t = 3.954); and operon composition (H2 vs. H53 and H54, carrying the FKLHIGJM or FKLH + operon): Two-sided unpaired t -test is carried out between H2 to H53 and H54. Unpaired t -test of data: H53 to H2, ∗∗∗∗, P < 0.0001 (t = 44.32). b, Schematic illustration of the ASmHBA (H2 strain), FKLHIGJM (H53 strain), and FKLH + (H54 strain) operons. c, In vitro HBA synthesis using CCEs from H57 cultivated in 2YT medium, supplemented with gradient amounts of either CCE or CobA enzyme. d. Chromatogram of synthetic HBA in CCE3 group, CCE1 group in (c) with standards. UroIII-STD, uroporphyrinogen III standard; HBA-STD, hydrogenobyrinate acid standard; CCE3 and CCE1, reactants using 1-fold H57 CCE and 3-fold H57 CCE in (c).

    Journal: Synthetic and Systems Biotechnology

    Article Title: Reconstructing the hydrogenobyrinic acid synthetic toolkit by combining cell-free systems and metabolic engineering

    doi: 10.1016/j.synbio.2026.01.012

    Figure Lengend Snippet: Optimization of the artificial HBA operon. a, In vitro HBA production using CCE from various strains under different modifications. promoter replacement (H2 vs. H46 and H47, trc or tac promoters): Two-sided unpaired t -test is carried out between H2 to H46 and H47. Unpaired t -test of data: H46 to H2, ∗∗∗∗, P < 0.0001 (t = 23.77); H47 to H2, ∗∗∗∗, P < 0.0001 (t = 33.93); chassis variation (H2 vs. H48–H52, different E. coli strains harboring the SmHBA plasmid): Two-sided unpaired t -test is carried out between H2 to H48-52, but no significant differences were observed; culture medium effects (H2 grown in different media): Unpaired t -test of data: 2YT to LB, ∗, P = 0.0168 (t = 3.954); and operon composition (H2 vs. H53 and H54, carrying the FKLHIGJM or FKLH + operon): Two-sided unpaired t -test is carried out between H2 to H53 and H54. Unpaired t -test of data: H53 to H2, ∗∗∗∗, P < 0.0001 (t = 44.32). b, Schematic illustration of the ASmHBA (H2 strain), FKLHIGJM (H53 strain), and FKLH + (H54 strain) operons. c, In vitro HBA synthesis using CCEs from H57 cultivated in 2YT medium, supplemented with gradient amounts of either CCE or CobA enzyme. d. Chromatogram of synthetic HBA in CCE3 group, CCE1 group in (c) with standards. UroIII-STD, uroporphyrinogen III standard; HBA-STD, hydrogenobyrinate acid standard; CCE3 and CCE1, reactants using 1-fold H57 CCE and 3-fold H57 CCE in (c).

    Article Snippet: A representative example is the HBA synthetic pathway: after the porphyrin ring compound Urogen III is assembled, nine successive enzymatic reactions modify the macrocycle by introducing eight methyl groups and removing a methylene bridge, thereby altering its symmetry.

    Techniques: In Vitro, Plasmid Preparation

    Optimization of the HBA synthetic system. a, HBA titers obtained from screening single Cob enzyme supplementation in the H53∗ CCE reaction: the control H53 CCE reaction, H53–CobA + (H53 CCE with 4 g/L CobA added), and H53–CCE + (H53 CCE with threefold CCE input). ∗ indicates that H53 CCE was prepared from cultures grown in LB medium, whereas unmarked H53 CCE was prepared from cultures grown in 2YT medium. Statistical Significance without bracket denotes unpaired t -test comparisons between each supplemented group (A+, I+, G+, J+, M+, F+, K+, L+, H+) and the corresponding Ori group under the same CCE introduction condition. Unpaired t -test of data: H53-CobA + to H53∗, ∗∗∗, P = 0.0004 (t = 10.67), H53-CCE + to H53∗, ∗∗∗∗, P < 0.0001 (t = 31.05). b, Urogen III accumulation under the same conditions as in (a). Unpaired t -test of data: H53-CobA + to H53∗, ns, P = 0.2509 (t = 1.341), H53-CCE + to H53∗, ∗∗∗∗, P < 0.0001 (t = 61.82). c, Schematic illustration of HBA biosynthesis with SAM supplementation. Abbreviation: 5-ALA, 5-Aminolevulinate; PBG, porphobilinogen; HMB, hydroxymethylbilane; L-Met, l -methionine; SAM, S-adenosyl- l -methionine; SAH, S-adenosyl- l -homocysteine; SRH, S-ribosyl- l -homocysteine. d, Orthogonal combinations of PpK, MetK, and MtnN enzymes used to enhance HBA production via SAM supplementation. The color intensity of the bar corresponds to the magnitude of the values for enhanced visual clarity. e, HBA titers in the optimized SAM supplementation system by adjusting ATP synthesis through varying AMP and SHMP inputs.

    Journal: Synthetic and Systems Biotechnology

    Article Title: Reconstructing the hydrogenobyrinic acid synthetic toolkit by combining cell-free systems and metabolic engineering

    doi: 10.1016/j.synbio.2026.01.012

    Figure Lengend Snippet: Optimization of the HBA synthetic system. a, HBA titers obtained from screening single Cob enzyme supplementation in the H53∗ CCE reaction: the control H53 CCE reaction, H53–CobA + (H53 CCE with 4 g/L CobA added), and H53–CCE + (H53 CCE with threefold CCE input). ∗ indicates that H53 CCE was prepared from cultures grown in LB medium, whereas unmarked H53 CCE was prepared from cultures grown in 2YT medium. Statistical Significance without bracket denotes unpaired t -test comparisons between each supplemented group (A+, I+, G+, J+, M+, F+, K+, L+, H+) and the corresponding Ori group under the same CCE introduction condition. Unpaired t -test of data: H53-CobA + to H53∗, ∗∗∗, P = 0.0004 (t = 10.67), H53-CCE + to H53∗, ∗∗∗∗, P < 0.0001 (t = 31.05). b, Urogen III accumulation under the same conditions as in (a). Unpaired t -test of data: H53-CobA + to H53∗, ns, P = 0.2509 (t = 1.341), H53-CCE + to H53∗, ∗∗∗∗, P < 0.0001 (t = 61.82). c, Schematic illustration of HBA biosynthesis with SAM supplementation. Abbreviation: 5-ALA, 5-Aminolevulinate; PBG, porphobilinogen; HMB, hydroxymethylbilane; L-Met, l -methionine; SAM, S-adenosyl- l -methionine; SAH, S-adenosyl- l -homocysteine; SRH, S-ribosyl- l -homocysteine. d, Orthogonal combinations of PpK, MetK, and MtnN enzymes used to enhance HBA production via SAM supplementation. The color intensity of the bar corresponds to the magnitude of the values for enhanced visual clarity. e, HBA titers in the optimized SAM supplementation system by adjusting ATP synthesis through varying AMP and SHMP inputs.

    Article Snippet: A representative example is the HBA synthetic pathway: after the porphyrin ring compound Urogen III is assembled, nine successive enzymatic reactions modify the macrocycle by introducing eight methyl groups and removing a methylene bridge, thereby altering its symmetry.

    Techniques: Control

    Dose-responsive target-responsive accessibility profiling (TRAP) identifies TEPP-46 targets in complex proteomes. (A) Volcano plots showing lysine accessibility changes in HeLa cell lysates. Each treatment group contained 100 μg of HeLa lysate and was treated with TEPP-46 at multiple concentrations (1 nM, 10 nM, 50 nM, 100 nM, 500 nM, 1 μM, 5 μM, and 10 μM), followed by ligand incubation for 1 h and TRAP labeling for 30 min, both performed at 25 °C. Thresholds were defined as TRAP ratio <0.5 or >2 with statistical significance assessed by one-way analysis of variance (ANOVA); ∗∗∗P < 0.001. (B) Dose-responsive accessibility changes at lysine residues K305/K311 of pyruvate kinase M2 (PKM2) upon TEPP-46 treatment, fitted using a four-parameter logistic (4 PL) model ( R 2 = 0.9951; n = 3 independent biological replicates). (C) Quantitative TRAP analysis of lysine-containing peptides within PKM2. Blue indicates TRAP peptides exhibiting the strongest accessibility changes, while cyan denotes peptides showing weaker or inconsistent changes ( n = 3 independent biological replicates). (D) Crystal structure of PKM2 (PDB: 3U2Z ) showing TEPP-46 (yellow) bound near the K305/K311 region. The TRAP-identified peptide segment exhibiting altered accessibility (K305/K311) is highlighted in blue, whereas non-responsive peptides are shown in cyan. PDB: protein data bank.

    Journal: Journal of Pharmaceutical Analysis

    Article Title: DT-TRAP enables accurate target recognition via simplified dosing and low-temperature incubation

    doi: 10.1016/j.jpha.2026.101605

    Figure Lengend Snippet: Dose-responsive target-responsive accessibility profiling (TRAP) identifies TEPP-46 targets in complex proteomes. (A) Volcano plots showing lysine accessibility changes in HeLa cell lysates. Each treatment group contained 100 μg of HeLa lysate and was treated with TEPP-46 at multiple concentrations (1 nM, 10 nM, 50 nM, 100 nM, 500 nM, 1 μM, 5 μM, and 10 μM), followed by ligand incubation for 1 h and TRAP labeling for 30 min, both performed at 25 °C. Thresholds were defined as TRAP ratio <0.5 or >2 with statistical significance assessed by one-way analysis of variance (ANOVA); ∗∗∗P < 0.001. (B) Dose-responsive accessibility changes at lysine residues K305/K311 of pyruvate kinase M2 (PKM2) upon TEPP-46 treatment, fitted using a four-parameter logistic (4 PL) model ( R 2 = 0.9951; n = 3 independent biological replicates). (C) Quantitative TRAP analysis of lysine-containing peptides within PKM2. Blue indicates TRAP peptides exhibiting the strongest accessibility changes, while cyan denotes peptides showing weaker or inconsistent changes ( n = 3 independent biological replicates). (D) Crystal structure of PKM2 (PDB: 3U2Z ) showing TEPP-46 (yellow) bound near the K305/K311 region. The TRAP-identified peptide segment exhibiting altered accessibility (K305/K311) is highlighted in blue, whereas non-responsive peptides are shown in cyan. PDB: protein data bank.

    Article Snippet: The small-molecule compounds TEPP-46, geldanamycin, staurosporine, and aspirin were purchased from MedChemExpress (Monmouth Junction, NJ, USA).

    Techniques: Incubation, Labeling

    Target identification of TEPP-46 using two- and three-dose target-responsive accessibility profiling (TRAP) analyses. (A) Quadrant plot showing proteins with consistent lysine accessibility changes in HeLa cell lysates. Each group contained 100 μg of HeLa cell lysate and was treated with TEPP-46 at 1 and 5 μM, followed by ligand incubation for 1 h at 25 °C and TRAP labeling for 30 min at the same temperature ( n = 3 independent biological replicates). Proteins with TRAP ratios (TEPP-46/control >2 or < 0.5) and statistical significance assessed by one-way analysis of variance (ANOVA; ∗∗∗ P < 0.001) were designated as potential targets. Accessibility decreases and increases are highlighted in blue and red, respectively. Each protein is represented by the peptide with the highest TRAP score. (B) Three-dimensional scatter plot showing shared targets across three doses of TEPP-46 (1, 5, and 10 μM). Drug incubation and TRAP labeling conditions were identical to those described in (A). Pyruvate kinase M2 (PKM2) was identified as the only consistent target (red) under statistical thresholds (TRAP ratio >2 or < 0.5; one-way ANOVA; ∗∗∗ P < 0.001). (C) Crystal structure of PKM2 (PDB: 3U2Z ) showing TEPP-46 (yellow) binding and corresponding lysine accessibility changes. The TRAP-identified peptide containing residues K305/K311 is highlighted in blue, whereas non-responsive peptides are shown in cyan, statistical significance assessed by one-way ANOVA (∗∗∗ P < 0.001, ∗∗∗∗ P < 0.0001). PDB: protein data bank.

    Journal: Journal of Pharmaceutical Analysis

    Article Title: DT-TRAP enables accurate target recognition via simplified dosing and low-temperature incubation

    doi: 10.1016/j.jpha.2026.101605

    Figure Lengend Snippet: Target identification of TEPP-46 using two- and three-dose target-responsive accessibility profiling (TRAP) analyses. (A) Quadrant plot showing proteins with consistent lysine accessibility changes in HeLa cell lysates. Each group contained 100 μg of HeLa cell lysate and was treated with TEPP-46 at 1 and 5 μM, followed by ligand incubation for 1 h at 25 °C and TRAP labeling for 30 min at the same temperature ( n = 3 independent biological replicates). Proteins with TRAP ratios (TEPP-46/control >2 or < 0.5) and statistical significance assessed by one-way analysis of variance (ANOVA; ∗∗∗ P < 0.001) were designated as potential targets. Accessibility decreases and increases are highlighted in blue and red, respectively. Each protein is represented by the peptide with the highest TRAP score. (B) Three-dimensional scatter plot showing shared targets across three doses of TEPP-46 (1, 5, and 10 μM). Drug incubation and TRAP labeling conditions were identical to those described in (A). Pyruvate kinase M2 (PKM2) was identified as the only consistent target (red) under statistical thresholds (TRAP ratio >2 or < 0.5; one-way ANOVA; ∗∗∗ P < 0.001). (C) Crystal structure of PKM2 (PDB: 3U2Z ) showing TEPP-46 (yellow) binding and corresponding lysine accessibility changes. The TRAP-identified peptide containing residues K305/K311 is highlighted in blue, whereas non-responsive peptides are shown in cyan, statistical significance assessed by one-way ANOVA (∗∗∗ P < 0.001, ∗∗∗∗ P < 0.0001). PDB: protein data bank.

    Article Snippet: The small-molecule compounds TEPP-46, geldanamycin, staurosporine, and aspirin were purchased from MedChemExpress (Monmouth Junction, NJ, USA).

    Techniques: Drug discovery, Incubation, Labeling, Control, Binding Assay

    Structures of PBT2 (A) and PBT2 reduce the mRNA levels of TaSP and Tap104 (B). Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.

    Journal: International Journal for Parasitology: Drugs and Drug Resistance

    Article Title: In vitro and in vivo anti-piroplasm activity of PBT2 against Theileria annulata and Babesia microti

    doi: 10.1016/j.ijpddr.2026.100646

    Figure Lengend Snippet: Structures of PBT2 (A) and PBT2 reduce the mRNA levels of TaSP and Tap104 (B). Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.

    Article Snippet: The compounds PBT2 ( A), Bup and Diminazene aceturate (DA) were purchased from MedChemExpress (MCE) and stored as a 10 mM stock solution in DMSO (Macklin).

    Techniques:

    PBT2 reduces the schizont burden in T. annulata -infected cells. Representative immunofluorescence images of TaNM and TaXJS cells in each treatment group, schizont nuclei are shown in green and host cell nuclei in blue (A). Quantification of the number of schizonts per host cell in each treatment group (B). Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.

    Journal: International Journal for Parasitology: Drugs and Drug Resistance

    Article Title: In vitro and in vivo anti-piroplasm activity of PBT2 against Theileria annulata and Babesia microti

    doi: 10.1016/j.ijpddr.2026.100646

    Figure Lengend Snippet: PBT2 reduces the schizont burden in T. annulata -infected cells. Representative immunofluorescence images of TaNM and TaXJS cells in each treatment group, schizont nuclei are shown in green and host cell nuclei in blue (A). Quantification of the number of schizonts per host cell in each treatment group (B). Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.

    Article Snippet: The compounds PBT2 ( A), Bup and Diminazene aceturate (DA) were purchased from MedChemExpress (MCE) and stored as a 10 mM stock solution in DMSO (Macklin).

    Techniques: Infection, Immunofluorescence

    PBT2 inhibits the proliferation of TaNM and TaXJS cells in vitro. The IC 50 values of PBT2 on TaNM and TaXJS cells (A). The cell viability of BoMac cells with different concentration of PBT2 (B). Colony formation assay demonstrated that PBT2 completely abolished clonogenic growth, representative images of colony formation are shown (C). Quantification of colony numbers before and after treatment with PBT2 or Bup (D). The values obtained were used to determine the IC 50 using nonlinear regression (curve fitting analysis) in GraphPad Prism software. Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.

    Journal: International Journal for Parasitology: Drugs and Drug Resistance

    Article Title: In vitro and in vivo anti-piroplasm activity of PBT2 against Theileria annulata and Babesia microti

    doi: 10.1016/j.ijpddr.2026.100646

    Figure Lengend Snippet: PBT2 inhibits the proliferation of TaNM and TaXJS cells in vitro. The IC 50 values of PBT2 on TaNM and TaXJS cells (A). The cell viability of BoMac cells with different concentration of PBT2 (B). Colony formation assay demonstrated that PBT2 completely abolished clonogenic growth, representative images of colony formation are shown (C). Quantification of colony numbers before and after treatment with PBT2 or Bup (D). The values obtained were used to determine the IC 50 using nonlinear regression (curve fitting analysis) in GraphPad Prism software. Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.

    Article Snippet: The compounds PBT2 ( A), Bup and Diminazene aceturate (DA) were purchased from MedChemExpress (MCE) and stored as a 10 mM stock solution in DMSO (Macklin).

    Techniques: In Vitro, Concentration Assay, Colony Assay, Software

    Metal ion content in T. annulata schizonts following PBT2 treatment. Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗, P < 0.001; ∗∗∗∗, P < 0.0001 by one-way ANOVA followed by Dunnett's multiple comparisons test.

    Journal: International Journal for Parasitology: Drugs and Drug Resistance

    Article Title: In vitro and in vivo anti-piroplasm activity of PBT2 against Theileria annulata and Babesia microti

    doi: 10.1016/j.ijpddr.2026.100646

    Figure Lengend Snippet: Metal ion content in T. annulata schizonts following PBT2 treatment. Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗∗∗, P < 0.001; ∗∗∗∗, P < 0.0001 by one-way ANOVA followed by Dunnett's multiple comparisons test.

    Article Snippet: The compounds PBT2 ( A), Bup and Diminazene aceturate (DA) were purchased from MedChemExpress (MCE) and stored as a 10 mM stock solution in DMSO (Macklin).

    Techniques:

    PBT2 disrupts redox homeostasis and reduces SOD activity in infected cells. ROS levels in TaNM cells following PBT2 treatment were quantified by flow cytometry, representative flow cytometry histograms are shown (A). Quantitative analysis of ROS levels (B). SOD activity in TaNM cells after PBT2 exposure, showing a significant reduction compared with untreated controls (C). Manganese supplementation partially rescued PBT2-induced growth inhibition in TaNM cells, indicating functional involvement of Mn depletion in redox imbalance (D). Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗, P < 0.05; ∗∗, P < 0.005; ∗∗∗, P < 0.001; ∗∗∗∗, P < 0.0001 by one-way ANOVA followed by Tukey's multiple comparisons test.

    Journal: International Journal for Parasitology: Drugs and Drug Resistance

    Article Title: In vitro and in vivo anti-piroplasm activity of PBT2 against Theileria annulata and Babesia microti

    doi: 10.1016/j.ijpddr.2026.100646

    Figure Lengend Snippet: PBT2 disrupts redox homeostasis and reduces SOD activity in infected cells. ROS levels in TaNM cells following PBT2 treatment were quantified by flow cytometry, representative flow cytometry histograms are shown (A). Quantitative analysis of ROS levels (B). SOD activity in TaNM cells after PBT2 exposure, showing a significant reduction compared with untreated controls (C). Manganese supplementation partially rescued PBT2-induced growth inhibition in TaNM cells, indicating functional involvement of Mn depletion in redox imbalance (D). Error bars represent the SD of the mean from three independent biological replicates. ns, P > 0.05; ∗, P < 0.05; ∗∗, P < 0.005; ∗∗∗, P < 0.001; ∗∗∗∗, P < 0.0001 by one-way ANOVA followed by Tukey's multiple comparisons test.

    Article Snippet: The compounds PBT2 ( A), Bup and Diminazene aceturate (DA) were purchased from MedChemExpress (MCE) and stored as a 10 mM stock solution in DMSO (Macklin).

    Techniques: Activity Assay, Infection, Flow Cytometry, Inhibition, Functional Assay

    The growth inhibition of PBT2 on B. microti in vivo. Parasitemia was calculated by counting infected RBCs among 2000 R BCs using Giemsa-stained thin blood smears. The arrow indicates 5 consecutive days of treatment. Error bars represent the SD of the mean from five independent biological replicates, ∗, P < 0.05 by two-way ANOVA followed by Dunnett's multiple comparisons test (A). Representative Giemsa-stained blood smear image obtained at peak parasitemia on the 8th day (B).

    Journal: International Journal for Parasitology: Drugs and Drug Resistance

    Article Title: In vitro and in vivo anti-piroplasm activity of PBT2 against Theileria annulata and Babesia microti

    doi: 10.1016/j.ijpddr.2026.100646

    Figure Lengend Snippet: The growth inhibition of PBT2 on B. microti in vivo. Parasitemia was calculated by counting infected RBCs among 2000 R BCs using Giemsa-stained thin blood smears. The arrow indicates 5 consecutive days of treatment. Error bars represent the SD of the mean from five independent biological replicates, ∗, P < 0.05 by two-way ANOVA followed by Dunnett's multiple comparisons test (A). Representative Giemsa-stained blood smear image obtained at peak parasitemia on the 8th day (B).

    Article Snippet: The compounds PBT2 ( A), Bup and Diminazene aceturate (DA) were purchased from MedChemExpress (MCE) and stored as a 10 mM stock solution in DMSO (Macklin).

    Techniques: Inhibition, In Vivo, Infection, Staining

    Hematology profiles of PBT2-treated mice in vivo. The changes of RBCs (A), HGB (B), and HCT (C) in mice treated with PBT2 and DA. Error bars represent the SD of the mean from five independent biological replicates. Different colored asterisks indicate that the differences between the various groups are statistically significant. ∗, P < 0.05; ∗∗, P < 0.005; ∗∗∗, P < 0.001; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.

    Journal: International Journal for Parasitology: Drugs and Drug Resistance

    Article Title: In vitro and in vivo anti-piroplasm activity of PBT2 against Theileria annulata and Babesia microti

    doi: 10.1016/j.ijpddr.2026.100646

    Figure Lengend Snippet: Hematology profiles of PBT2-treated mice in vivo. The changes of RBCs (A), HGB (B), and HCT (C) in mice treated with PBT2 and DA. Error bars represent the SD of the mean from five independent biological replicates. Different colored asterisks indicate that the differences between the various groups are statistically significant. ∗, P < 0.05; ∗∗, P < 0.005; ∗∗∗, P < 0.001; ∗∗∗∗, P < 0.0001 by two-way ANOVA followed by Dunnett's multiple comparisons test.

    Article Snippet: The compounds PBT2 ( A), Bup and Diminazene aceturate (DA) were purchased from MedChemExpress (MCE) and stored as a 10 mM stock solution in DMSO (Macklin).

    Techniques: In Vivo