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matlab aoctool function  (MathWorks Inc)


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    MathWorks Inc matlab aoctool function
    Matlab Aoctool Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/aoctool+function/pmc12176619-439-5-5
    Average 90 stars, based on 1 article reviews
    matlab aoctool function - by Bioz Stars, 2026-09
    90/100 stars

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    other:

    Article Title: Parameter estimation of atherosclerotic tissue optical properties from three-dimensional intravascular optical coherence tomography
    Article Snippet: SEs were computed from the MATLAB toolbox function aoctool . α -T-PL, Parallel lines with α trimming : In this robust approach, we determined a μ t and I 0 for each A-line using IL fits, removed extreme outliers, and rank ordered results.

    Article Title: Noise-Correlation Is Modulated by Reward Expectation in the Primary Motor Cortex Bilaterally During Manual and Observational Tasks in Primates
    Article Snippet: We utilized the MATLAB function aoctool for this analysis with the model set to “separate lines,” such that there were no added constraints to the model. We have plotted for each unit pair the signal correlation ( x -axis), which is simply the crosscorrelation between the mean unit responses (PSTH, post-stimulus-time-histogram) during the given task period, against the noise-correlation for the unit pair.

    Article Title: Temperature Manipulation in Songbird Brain Implicates the Premotor Nucleus HVC in Birdsong Syntax
    Article Snippet: To test whether the dR T was the same for model and data, we applied an analysis of covariance (ANCOVA) using the MATLAB implementation aoctool to fit a separate line for each group.

    Article Title: Entrainment of somatosensory beta and gamma oscillations accompany improvement in tactile acuity after periodic and aperiodic repetitive sensory stimulation.
    Article Snippet: Previous research showed that repetitive sensory stimulation entrains neural oscillations at the stimulation rate, facilitates long-term potentiation like perceptual learning, and improves behavioural performance.. For example, short-time repetitive tactile stimulation improved tactile acuity measured with two-point or spatial orientation discrimination tests.. The behavioural gain was maximal for a stimulation rate of 20 Hz, the same frequency at which repetitive somatosensory stimulation elicits a steady-state response with maximum amplitude.

    Article Title: Effects of Salt Concentration on a Magnetic Nanoparticle-Based Aggregation Assay with a Tunable Dynamic Range
    Article Snippet: We performed linear regressions on the 10 and 90 biotin-MNP streptavidin-response curves using the aoctool Matlab command.

    Article Title: Effects of scheduled manual driving on drowsiness and response to take over request: A simulator study towards understanding drivers in automated driving.
    Article Snippet: Because current automated vehicles have operational limitations, it is important to ensure that the fallbackready driver is able to perform appropriately when required to take over control of the vehicle.. However, timerelated increase in driver drowsiness is well-known, and drowsy driving can affect response to take-over request (TOR).. It was previously reported that a scheduled period of manual driving during automated driving was beneficial in maintaining driver arousal level.

    Sequencing:

    Article Title: Disrupting the medial prefrontal cortex alters hippocampal sequences during deliberative decision making
    Article Snippet: .. To measure differences in sequence scores, controlling for cell count, we used an analysis of covariance (ANCOVA) with the MATLAB aoctool. ..

    Cell Counting:

    Article Title: Disrupting the medial prefrontal cortex alters hippocampal sequences during deliberative decision making
    Article Snippet: .. To measure differences in sequence scores, controlling for cell count, we used an analysis of covariance (ANCOVA) with the MATLAB aoctool. ..



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    matlab function aoctool  (MathWorks Inc)
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    A : 2PEF map of arterioles and venules (top) and of both vessel and GCaMP7f-expressing nNOS neurons (outlined in white, bottom). Vessels analyzed in B are circled in solid red or blue, and neurons are numbered (1,2,3) B : Arterioles, but not venules, dilate in response to whisker puffs, spontaneous whisking or motion (grooming). Representative Ca 2+ transients in neuron 1, 2, and 3 (middle). Overlay of normalized neural ensemble activity and arteriolar diameter changes highlighting the close correspondence between arteriolar and neural responses (bottom). C : Linear relationship between the magnitude of the ensemble activity and arteriolar dilatation in response to whisking or whisking and spontaneous motion. Notice that with whisking+motion the slope of the relationship is significantly greater than with whisking alone (multiple comparison of one-way analysis of <t>covariance</t> models). D : The distribution of correlation coefficients between arteriolar dilatation and nNOS Ca 2+ transients for individual neurons does not differ in the 3 mice studied (p>0.05; nested one-way ANOVA)(top). The strongest correlation is observed between ensemble activity and arteriolar dilatation (bottom). E : Representative arteriolar diameter changes relative to the timing of the peak Ca 2+ activity in individual neuron during 10 consecutive 5 sec whisker air puffs shown in B . Notice that in some neurons peak activity occur earlier than in other neurons. F : Average of ten raster plots in 3 mice showing early and late active nNOS neurons. Shading indicates standard deviation.
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    Image Search Results


    A : 2PEF map of arterioles and venules (top) and of both vessel and GCaMP7f-expressing nNOS neurons (outlined in white, bottom). Vessels analyzed in B are circled in solid red or blue, and neurons are numbered (1,2,3) B : Arterioles, but not venules, dilate in response to whisker puffs, spontaneous whisking or motion (grooming). Representative Ca 2+ transients in neuron 1, 2, and 3 (middle). Overlay of normalized neural ensemble activity and arteriolar diameter changes highlighting the close correspondence between arteriolar and neural responses (bottom). C : Linear relationship between the magnitude of the ensemble activity and arteriolar dilatation in response to whisking or whisking and spontaneous motion. Notice that with whisking+motion the slope of the relationship is significantly greater than with whisking alone (multiple comparison of one-way analysis of covariance models). D : The distribution of correlation coefficients between arteriolar dilatation and nNOS Ca 2+ transients for individual neurons does not differ in the 3 mice studied (p>0.05; nested one-way ANOVA)(top). The strongest correlation is observed between ensemble activity and arteriolar dilatation (bottom). E : Representative arteriolar diameter changes relative to the timing of the peak Ca 2+ activity in individual neuron during 10 consecutive 5 sec whisker air puffs shown in B . Notice that in some neurons peak activity occur earlier than in other neurons. F : Average of ten raster plots in 3 mice showing early and late active nNOS neurons. Shading indicates standard deviation.

    Journal: bioRxiv

    Article Title: Calcium transients in nNOS neurons underlie distinct phases of the neurovascular response to barrel cortex activation in awake mice

    doi: 10.1101/2022.10.03.510654

    Figure Lengend Snippet: A : 2PEF map of arterioles and venules (top) and of both vessel and GCaMP7f-expressing nNOS neurons (outlined in white, bottom). Vessels analyzed in B are circled in solid red or blue, and neurons are numbered (1,2,3) B : Arterioles, but not venules, dilate in response to whisker puffs, spontaneous whisking or motion (grooming). Representative Ca 2+ transients in neuron 1, 2, and 3 (middle). Overlay of normalized neural ensemble activity and arteriolar diameter changes highlighting the close correspondence between arteriolar and neural responses (bottom). C : Linear relationship between the magnitude of the ensemble activity and arteriolar dilatation in response to whisking or whisking and spontaneous motion. Notice that with whisking+motion the slope of the relationship is significantly greater than with whisking alone (multiple comparison of one-way analysis of covariance models). D : The distribution of correlation coefficients between arteriolar dilatation and nNOS Ca 2+ transients for individual neurons does not differ in the 3 mice studied (p>0.05; nested one-way ANOVA)(top). The strongest correlation is observed between ensemble activity and arteriolar dilatation (bottom). E : Representative arteriolar diameter changes relative to the timing of the peak Ca 2+ activity in individual neuron during 10 consecutive 5 sec whisker air puffs shown in B . Notice that in some neurons peak activity occur earlier than in other neurons. F : Average of ten raster plots in 3 mice showing early and late active nNOS neurons. Shading indicates standard deviation.

    Article Snippet: To evaluate statistical differences between the linear correlations of two data sets, we generated one-way analysis of covariance models (Matlab function: aoctool) and ran multiple comparison test (Tukey-Kramer) of the group means (Matlab function: multcompare).

    Techniques: Expressing, Whisker Assay, Activity Assay, Comparison, Standard Deviation