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cgh microarray slides 4×180k (Agilent technologies)

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Agilent technologies cgh microarray slides 4×180k
Cgh Microarray Slides 4×180k, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/180k+microarray+slides/pmc08748236-87-23-30
Average 90 stars, based on 1 article reviews

cgh microarray slides 4×180k - by Bioz Stars, 2026-10

90/100 stars

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Microarray:

Article Title: Short Copy Number Variations Potentially Associated with Tonic Immobility Responses in Newly Hatched Chicks
Article Snippet: .. We used a chicken CGH Microarray 4×180K (Agilent Technologies, Tokyo, Japan), containing 180,000 custom probes of 60-mer, because Agilent’s 60-mer offers the highest sensitivity and reproducibility among the currently available commercial platforms – . .. We designed these probes by using the eArray software (Available: https://earray.chem.agilent.com/earray/Accessed 2011 May 19).

Article Title: Proteogenomic analysis reveals adaptive strategies to alleviate the consequences of aneuploidy in cancer
Article Snippet: Genome-wide comparative genomic hybridization of cell lines (Supplementary Table 2) was carried out by IMGM laboratories (Martinsried, Germany). .. Agilent Human Genome CGH Microarrays (4×44K format) and SurePrint G3 Human CGH Microarray (4×180K format) were used in combination with a Two-Color based hybridization protocol with a commercially available reference gDNA. .. Signals on the microarrays were extracted using the Agilent DNA Microarray Scanner.

Hybridization:

other:

Article Title: P581: Comparison of GLA variant profile in newborn screening confirmatory testing and diagnostic testing for Fabry disease*
Article Snippet: Methods: Chromosomal microarray (CMA) analysis, including array comparative genomic hybridization (aCGH) and SNP analysis, was performed using the Agilent 4×180k aCGH+SNP platform.

Article Title: 17q12 deletion syndrome mouse model shows defects in craniofacial, brain and kidney development, and glucose homeostasis
Article Snippet: Whole-genome aCGH was performed using SurePrint G3 Mouse CGH Array Kit (4×180K) (Agilent; CD Genomics).

Article Title: P441: Genomic and biochemical profile of pseudodeficiency in lysosomal storage disorders
Article Snippet: Methods: Approximately 11,107 patients have been referred to our cytogenetics lab for chromosomal microarray analysis, which was performed using the Agilent 8×60k aCGH and 4×180k aCGH+SNP platforms.

Article Title: Reliable Single Cell Array CGH for Clinical Samples
Article Snippet: Paired samples (single cell and cell pool) for both PT1590 cell line and healthy donor were labeled in parallel with both techniques and subsequently hybridized on Agilent SurePrint G3 Human 4×180k arrays.

Labeling:

Article Title: Ts66Yah, a mouse model of Down syndrome with improved construct and face validity
Article Snippet: .. After labeling, the DNAs were hybridized on CGH 4×180K mouse slides (AMADID 027411, Agilent Technologies). .. Finally, the slides were scanned with a G2505C scanner (Agilent Technologies).

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$(a-b) LncRNA microarray expression data from BMDMs incubated in distinct polarizing conditions. A total of 1,251 differentially-expressed lncRNAs were identified between the M(LPS+IFN-γ) and M(IL-4) macrophages. (a) Scatter plots show the variation in lncRNA expression between the M(LPS+IFN-γ) and M(IL-4) macrophages. The values of the X and Y axes in the scatter plot are the averaged normalized values in each group (log2-scaled). (b) Heat maps of lncRNAs expression profiles between the two groups. “Red” indicates high relative expression and “green” indicates low relative expression. One ANOVA test was used for statistical analysis. LncRNA with expression fold change > 2 and with FDR-adiusted P value < 0.05 was considered statistically significant. (c) Confirmation of the differential expression of lncRNAs by RT-qPCR. Four differentially expressed lncRNAs were validated by RT-qPCR. The y-axis represents the log2-transformed median fold-change in expression. (d) LncRNA Dnmt3aos locates on the Dnmt3a opposite strand on mouse chromosome 12. (e) RT-qPCR detection of Dnmt3aos level in cellular fractions from BMDMs. U6 and GAPDH were the nuclear and cytoplasmic controls, respectively. Data were expressed as the means ± SD of three independent experiments. (f) Dnmt3aos expression in BMDMs detected by RNA-FISH. Scale bar, 20 mm.$

Journal: bioRxiv

Article Title: LncRNA Dnmt3aos regulates Dnmt3a expression leading to aberrant DNA methylation in macrophage polarization

doi: 10.1101/514307

Figure Lengend Snippet: (a-b) LncRNA microarray expression data from BMDMs incubated in distinct polarizing conditions. A total of 1,251 differentially-expressed lncRNAs were identified between the M(LPS+IFN-γ) and M(IL-4) macrophages. (a) Scatter plots show the variation in lncRNA expression between the M(LPS+IFN-γ) and M(IL-4) macrophages. The values of the X and Y axes in the scatter plot are the averaged normalized values in each group (log2-scaled). (b) Heat maps of lncRNAs expression profiles between the two groups. “Red” indicates high relative expression and “green” indicates low relative expression. One ANOVA test was used for statistical analysis. LncRNA with expression fold change > 2 and with FDR-adiusted P value < 0.05 was considered statistically significant. (c) Confirmation of the differential expression of lncRNAs by RT-qPCR. Four differentially expressed lncRNAs were validated by RT-qPCR. The y-axis represents the log2-transformed median fold-change in expression. (d) LncRNA Dnmt3aos locates on the Dnmt3a opposite strand on mouse chromosome 12. (e) RT-qPCR detection of Dnmt3aos level in cellular fractions from BMDMs. U6 and GAPDH were the nuclear and cytoplasmic controls, respectively. Data were expressed as the means ± SD of three independent experiments. (f) Dnmt3aos expression in BMDMs detected by RNA-FISH. Scale bar, 20 mm.

Article Snippet: Each SBC mouse (4*180K) LncRNA microarray slide (Agilent Technologies Inc.) was hybridized with 1.65 μg Cy3-labeled cRNA using a gene expression hybridization kit (Agilent Technologies, Inc.).

Techniques: Microarray, Expressing, Incubation, Quantitative RT-PCR, Transformation Assay