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dragen variant calling algorithm  (Illumina Inc)


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    Illumina Inc dragen variant calling algorithm
    Dragen Variant Calling Algorithm, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/variant+calling+algorithm/somatic+variant+caller+algorithm/pm40305610-213-9-9
    Average 90 stars, based on 1 article reviews
    dragen variant calling algorithm - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Variant Assay:

    Article Title: Analysis of 2,440 human exomes highlights the evolution and functional impact of rare coding variation
    Article Snippet: Deep exome resequencing is a powerful approach for delineating patterns of protein-coding variation among genes, pathways, individuals and populations.. We analyzed exome data from 2,440 individuals of European and African ancestry as part of the National Heart, Lung, and Blood Institute’s Exome Project, the aim of which is to discover novel genes and mechanisms that contribute to heart, lung and blood disorders.. Each exome was sequenced to a mean coverage of 116×, allowing detailed inferences about the population genomic patterns of both common variation and rare coding variation.

    Article Title: Genetic Investigation into the Paradoxical Differential Risk of Atrial Fibrillation Among Blacks and Whites
    Article Snippet: DNA analysis in Health ABC was performed using the Illumina Human 1M-Duo microarray. .. Variant calling for both studies was performed using the Illumina BeadStudio algorithm. .. Genotyping within ARIC was performed on the Affymetrix 6.0 DNA microarray (Affymetrix, Santa Clara, CA) and analyzed with the Birdseed variant calling algorithm.



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    Main characteristics of the studies included in the present systematic review.

    Journal: Diagnostics

    Article Title: The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review

    doi: 10.3390/diagnostics12040963

    Figure Lengend Snippet: Main characteristics of the studies included in the present systematic review.

    Article Snippet: ctDNA as a feasible strategy for genotyping and monitoring , Variants in SOCS1 (28%), IGLL5 (36%), TNFAIP3 (23%), GNA13 (23%) and STAT6 (21%). Poor prognosis features correlated with ctDNA concentration , VarScan2 and DGCaller algorithms for variant calling. RefSeq database for functional annotation , Illumina, San Diego, CA, USA , ctDNA , 60 cases of newly diagnosed cHL , Identify cHL somatic variants , Alcoceba et al., (2021) [ ] .

    Techniques: Sequencing, Software, Concentration Assay, Variant Assay, Functional Assay, Control, Biomarker Discovery, Isolation, Selection