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u95av2 microarrays  (Thermo Fisher)


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    Structured Review

    Thermo Fisher u95av2 microarrays
    Training and test datasets used to validate ALL subclass predictors
    U95av2 Microarrays, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/u95av2+microarray/pmc00522810-127-36-35
    Average 86 stars, based on 1 article reviews
    u95av2 microarrays - by Bioz Stars, 2026-09
    86/100 stars

    Images

    1) Product Images from "Inter-Platform comparability of microarrays in acute lymphoblastic leukemia"

    Article Title: Inter-Platform comparability of microarrays in acute lymphoblastic leukemia

    Journal: BMC Genomics

    doi: 10.1186/1471-2164-5-71

    Training and test datasets used to validate ALL subclass predictors
    Figure Legend Snippet: Training and test datasets used to validate ALL subclass predictors

    Techniques Used: Microarray

    Prediction accuracies for ALL subclasses as determined by the different microarray platforms.
    Figure Legend Snippet: Prediction accuracies for ALL subclasses as determined by the different microarray platforms.

    Techniques Used: Microarray

    Related Articles

    Gene Expression:

    Article Title: The process of somatic hypermutation increases polyreactivity for central nervous system antigens in primary central nervous system lymphoma
    Article Snippet: Double immunofluorescence was performed with rabbit anti- SNRPC and mouse anti-GFAP (clone GA-5, Biogenex, Fremont, CA, USA), mouse anti-Olig2 (clone OLIG2/2400, Abcam), mouse anti-NeuN (clone A60, Merck, Burlington, MA, USA), mouse anti- CD68 (clone KP1, DCS, Hamburg, Germany), and mouse anti- CD34 (clone Qbend/10, Biogenex, Palo Alto, CA, USA), respectively, including appropriate positive and negative controls ( Online Supplementary Figures S2 and S3 ) was performed. .. Gene expression profiling (GEP) (10 normal CNS tissues, 21 PCNSL) obtained by the Affymetrix U95Av2 microarray (Santa Clara, CA, USA) published previously were analyzed for SNRPC mRNA expression. ..

    Microarray:

    Article Title: The process of somatic hypermutation increases polyreactivity for central nervous system antigens in primary central nervous system lymphoma
    Article Snippet: Double immunofluorescence was performed with rabbit anti- SNRPC and mouse anti-GFAP (clone GA-5, Biogenex, Fremont, CA, USA), mouse anti-Olig2 (clone OLIG2/2400, Abcam), mouse anti-NeuN (clone A60, Merck, Burlington, MA, USA), mouse anti- CD68 (clone KP1, DCS, Hamburg, Germany), and mouse anti- CD34 (clone Qbend/10, Biogenex, Palo Alto, CA, USA), respectively, including appropriate positive and negative controls ( Online Supplementary Figures S2 and S3 ) was performed. .. Gene expression profiling (GEP) (10 normal CNS tissues, 21 PCNSL) obtained by the Affymetrix U95Av2 microarray (Santa Clara, CA, USA) published previously were analyzed for SNRPC mRNA expression. ..

    Article Title: The oxidative stress response regulates DKK1 expression through the JNK signaling cascade in multiple myeloma plasma cells
    Article Snippet: .. Gene-expression profiling using the Affymetrix U95Av2 microarray, which contains approximately 12 000 genes (Affymetrix, Santa Clara, CA), was performed on CD138-purified plasma cells after coculturing with osteoclasts and receiving treatment with relevant agents, as previously described. .. Lenalidomide and thalidomide (Celgene, Summit, NJ) were dissolved in dimethyl sulfoxide (DMSO; Sigma, St Louis, MO) at a concentration of 200 mM and were stored at −20°C until use.

    Article Title: The oxidative stress response regulates DKK1 expression through the JNK signaling cascade in multiple myeloma plasma cells
    Article Snippet: .. Gene-expression profiling Gene-expression profiling using the Affymetrix U95Av2 microarray, which contains approximately 12 000 genes (Affymetrix, Santa Clara, CA), was performed on CD138-purified plasma cells after coculturing with osteoclasts and receiving treatment with relevant agents, as previously described. .. 9 Cell treatments Lenalidomide and thalidomide (Celgene, Summit, NJ) were dissolved in dimethyl sulfoxide (DMSO; Sigma, St Louis, MO) at a concentration of 200 mM and were stored at −20°C until use.

    Article Title: Neutrophil gelatinase-associated lipocalin mediates 13- cis retinoic acid-induced apoptosis of human sebaceous gland cells
    Article Snippet: .. Biotinylated cRNA, produced through in vitro transcription, was fragmented and hybridized to an Affymetrix human U133A 2.0 microarray for 1-week biopsies and U95Av2 microarray for SEB-1 sebocytes. .. The arrays were processed on a GeneChip Fluidics Station 450 and scanned on an Affymetrix GeneChip Scanner.

    Article Title: YY1 modulates taxane response in epithelial ovarian cancer
    Article Snippet: .. The NCI60 database consists of a panel of 59 establlished cancer cell lines from multiple tissue types, with accompanying Affymetrix U95Av2 microarray data, for which pharmacologic response data has been generated for over 40,000 tested compounds ( 29 ). ..

    Article Title: Utilizing the Molecular Gateway: The Path to Personalized Cancer Management
    Article Snippet: .. Yeoh et al. ( 61 ) , Affymetrix U95Av2 microarray , BM aspirate , Pediatric ALL (classification and PVAD failure). .. Rosenwald et al. ( 62 ) , 17-Gene signature cDNA microarray , FFPE , DLBCL.

    Article Title: Methods of determining IMiDS resistance in plasma cell disorders
    Article Snippet: .. Samples were hybridized to an Affymetrix U133Plus2.0 microarray for pomalidomide study and to an Affymetrix U95Av2 microarray for thalidomide and lenalidomide studies according to the manufacturer's recommendations and then read on GeneChip Scanner 3000 (Affymetrix). ..

    Expressing:

    Article Title: The process of somatic hypermutation increases polyreactivity for central nervous system antigens in primary central nervous system lymphoma
    Article Snippet: Double immunofluorescence was performed with rabbit anti- SNRPC and mouse anti-GFAP (clone GA-5, Biogenex, Fremont, CA, USA), mouse anti-Olig2 (clone OLIG2/2400, Abcam), mouse anti-NeuN (clone A60, Merck, Burlington, MA, USA), mouse anti- CD68 (clone KP1, DCS, Hamburg, Germany), and mouse anti- CD34 (clone Qbend/10, Biogenex, Palo Alto, CA, USA), respectively, including appropriate positive and negative controls ( Online Supplementary Figures S2 and S3 ) was performed. .. Gene expression profiling (GEP) (10 normal CNS tissues, 21 PCNSL) obtained by the Affymetrix U95Av2 microarray (Santa Clara, CA, USA) published previously were analyzed for SNRPC mRNA expression. ..

    Clinical Proteomics:

    Article Title: The oxidative stress response regulates DKK1 expression through the JNK signaling cascade in multiple myeloma plasma cells
    Article Snippet: .. Gene-expression profiling using the Affymetrix U95Av2 microarray, which contains approximately 12 000 genes (Affymetrix, Santa Clara, CA), was performed on CD138-purified plasma cells after coculturing with osteoclasts and receiving treatment with relevant agents, as previously described. .. Lenalidomide and thalidomide (Celgene, Summit, NJ) were dissolved in dimethyl sulfoxide (DMSO; Sigma, St Louis, MO) at a concentration of 200 mM and were stored at −20°C until use.

    Article Title: The oxidative stress response regulates DKK1 expression through the JNK signaling cascade in multiple myeloma plasma cells
    Article Snippet: .. Gene-expression profiling Gene-expression profiling using the Affymetrix U95Av2 microarray, which contains approximately 12 000 genes (Affymetrix, Santa Clara, CA), was performed on CD138-purified plasma cells after coculturing with osteoclasts and receiving treatment with relevant agents, as previously described. .. 9 Cell treatments Lenalidomide and thalidomide (Celgene, Summit, NJ) were dissolved in dimethyl sulfoxide (DMSO; Sigma, St Louis, MO) at a concentration of 200 mM and were stored at −20°C until use.

    other:

    Article Title: OCTN1 is a high-affinity carrier of nucleoside analogs
    Article Snippet: External validation was performed on published data from 54 pediatric patients with AML receiving cytarabine-based chemotherapy on whom gene expression (Affymetrix U95Av2 microarray) and clinical data (EFS and CR) were available [see Table S2 in ( 14 )].

    Produced:

    Article Title: Neutrophil gelatinase-associated lipocalin mediates 13- cis retinoic acid-induced apoptosis of human sebaceous gland cells
    Article Snippet: .. Biotinylated cRNA, produced through in vitro transcription, was fragmented and hybridized to an Affymetrix human U133A 2.0 microarray for 1-week biopsies and U95Av2 microarray for SEB-1 sebocytes. .. The arrays were processed on a GeneChip Fluidics Station 450 and scanned on an Affymetrix GeneChip Scanner.

    In Vitro:

    Article Title: Neutrophil gelatinase-associated lipocalin mediates 13- cis retinoic acid-induced apoptosis of human sebaceous gland cells
    Article Snippet: .. Biotinylated cRNA, produced through in vitro transcription, was fragmented and hybridized to an Affymetrix human U133A 2.0 microarray for 1-week biopsies and U95Av2 microarray for SEB-1 sebocytes. .. The arrays were processed on a GeneChip Fluidics Station 450 and scanned on an Affymetrix GeneChip Scanner.

    Generated:

    Article Title: YY1 modulates taxane response in epithelial ovarian cancer
    Article Snippet: .. The NCI60 database consists of a panel of 59 establlished cancer cell lines from multiple tissue types, with accompanying Affymetrix U95Av2 microarray data, for which pharmacologic response data has been generated for over 40,000 tested compounds ( 29 ). ..



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    Image Search Results


    Training and test datasets used to validate ALL subclass predictors

    Journal: BMC Genomics

    Article Title: Inter-Platform comparability of microarrays in acute lymphoblastic leukemia

    doi: 10.1186/1471-2164-5-71

    Figure Lengend Snippet: Training and test datasets used to validate ALL subclass predictors

    Article Snippet: To create a predictor that allows for the direct comparison between different generation Affymetrix arrays and cDNA arrays, we used the predictor gene list for each subclass provided by Yeoh et al . (2002) from Affymetrix U95Av2 microarrays.

    Techniques: Microarray

    Prediction accuracies for ALL subclasses as determined by the different microarray platforms.

    Journal: BMC Genomics

    Article Title: Inter-Platform comparability of microarrays in acute lymphoblastic leukemia

    doi: 10.1186/1471-2164-5-71

    Figure Lengend Snippet: Prediction accuracies for ALL subclasses as determined by the different microarray platforms.

    Article Snippet: To create a predictor that allows for the direct comparison between different generation Affymetrix arrays and cDNA arrays, we used the predictor gene list for each subclass provided by Yeoh et al . (2002) from Affymetrix U95Av2 microarrays.

    Techniques: Microarray