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tlcv2 backbone  (Addgene inc)


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    Structured Review

    Addgene inc tlcv2 backbone
    Tlcv2 Backbone, supplied by Addgene inc, used in various techniques. Bioz Stars score: 96/100, based on 147 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/tlcv2+backbone/TLCV2+(Plasmid+%2387360)/pmc12911328-37-7-9
    Average 96 stars, based on 147 article reviews
    tlcv2 backbone - by Bioz Stars, 2026-10
    96/100 stars

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    Related Articles

    Construct:

    Article Title: Integrative CRISPR Screening and RNA Analyses Discover an Essential Role for PUF60 Interactions with 3’ Splice Sites in Cancer Progression
    Article Snippet: .. To construct a doxycycline (DOX)-inducible library, the TLCV2 backbone (Addgene Cat# 87360, RRID:Addgene_87360) [ 15 ] was digested with BsmBI and PCR amplified sgRNA oligonucleotide inserts were Gibson assembled. ..

    Article Title: Integrative CRISPR Screening and RNA Analyses Discover an Essential Role for PUF60 Interactions with 3' Splice Sites in Cancer Progression
    Article Snippet: .. To construct a doxycycline (DOX)-inducible library, the TLCV2 backbone (Addgene Cat# 87360, RRID:Addgene_87360) [15] was digested with BsmBI and PCR amplified D ow naded rom http://aacrjournals.orgarticle-pdf/doi/10.1158/0008-5472.C AN -25-0453/35/can-25-0453.pdf by gest on 23 D ecem er 2025 sgRNA oligonucleotide inserts were Gibson assembled. ..

    Article Title: Integrative CRISPR Screening and RNA Analyses Discover an Essential Role for PUF60 Interactions with 3' Splice Sites in Cancer Progression
    Article Snippet: .. To construct a doxycycline (DOX)-inducible library, the TLCV2 backbone (Addgene Cat# 87360, RRID:Addgene_87360) [15] was digested with BsmBI and PCR amplified D ow nloaded from http://aacrjournals.org/cancerres/article-pdf/doi/10.1158/0008-5472.C AN -25-0453/3717105/can-25-0453.pdf by guest on 23 D ecem ber 2025 sgRNA oligonucleotide inserts were Gibson assembled. ..

    Polymerase Chain Reaction:

    Article Title: Integrative CRISPR Screening and RNA Analyses Discover an Essential Role for PUF60 Interactions with 3’ Splice Sites in Cancer Progression
    Article Snippet: .. To construct a doxycycline (DOX)-inducible library, the TLCV2 backbone (Addgene Cat# 87360, RRID:Addgene_87360) [ 15 ] was digested with BsmBI and PCR amplified sgRNA oligonucleotide inserts were Gibson assembled. ..

    Article Title: Integrative CRISPR Screening and RNA Analyses Discover an Essential Role for PUF60 Interactions with 3' Splice Sites in Cancer Progression
    Article Snippet: .. To construct a doxycycline (DOX)-inducible library, the TLCV2 backbone (Addgene Cat# 87360, RRID:Addgene_87360) [15] was digested with BsmBI and PCR amplified D ow naded rom http://aacrjournals.orgarticle-pdf/doi/10.1158/0008-5472.C AN -25-0453/35/can-25-0453.pdf by gest on 23 D ecem er 2025 sgRNA oligonucleotide inserts were Gibson assembled. ..

    Article Title: Integrative CRISPR Screening and RNA Analyses Discover an Essential Role for PUF60 Interactions with 3' Splice Sites in Cancer Progression
    Article Snippet: .. To construct a doxycycline (DOX)-inducible library, the TLCV2 backbone (Addgene Cat# 87360, RRID:Addgene_87360) [15] was digested with BsmBI and PCR amplified D ow nloaded from http://aacrjournals.org/cancerres/article-pdf/doi/10.1158/0008-5472.C AN -25-0453/3717105/can-25-0453.pdf by guest on 23 D ecem ber 2025 sgRNA oligonucleotide inserts were Gibson assembled. ..

    Amplification:

    Article Title: Integrative CRISPR Screening and RNA Analyses Discover an Essential Role for PUF60 Interactions with 3’ Splice Sites in Cancer Progression
    Article Snippet: .. To construct a doxycycline (DOX)-inducible library, the TLCV2 backbone (Addgene Cat# 87360, RRID:Addgene_87360) [ 15 ] was digested with BsmBI and PCR amplified sgRNA oligonucleotide inserts were Gibson assembled. ..

    Article Title: In situ visualization of m 6 A sites in cellular mRNAs
    Article Snippet: .. To generate TLCV2-APO1-YTH, the APO1-YTH transgene was amplified from pCMV-APOBEC1-YTH (Addgene #131636) and inserted into the TLCV2 backbone (gift from Adam Karpf, Addgene #87360) replacing the CAS9-FLAG sequence. .. To generate TLCV2-APO1-YTH, the APO1-YTH transgene was amplified from pCMV-APOBEC1-YTH (Addgene #131636) and inserted into the TLCV2 backbone (gift from Adam Karpf, Addgene #87360) replacing the CAS9-FLAG sequence.

    Article Title: Integrative CRISPR Screening and RNA Analyses Discover an Essential Role for PUF60 Interactions with 3' Splice Sites in Cancer Progression
    Article Snippet: .. To construct a doxycycline (DOX)-inducible library, the TLCV2 backbone (Addgene Cat# 87360, RRID:Addgene_87360) [15] was digested with BsmBI and PCR amplified D ow naded rom http://aacrjournals.orgarticle-pdf/doi/10.1158/0008-5472.C AN -25-0453/35/can-25-0453.pdf by gest on 23 D ecem er 2025 sgRNA oligonucleotide inserts were Gibson assembled. ..

    Article Title: Integrative CRISPR Screening and RNA Analyses Discover an Essential Role for PUF60 Interactions with 3' Splice Sites in Cancer Progression
    Article Snippet: .. To construct a doxycycline (DOX)-inducible library, the TLCV2 backbone (Addgene Cat# 87360, RRID:Addgene_87360) [15] was digested with BsmBI and PCR amplified D ow nloaded from http://aacrjournals.org/cancerres/article-pdf/doi/10.1158/0008-5472.C AN -25-0453/3717105/can-25-0453.pdf by guest on 23 D ecem ber 2025 sgRNA oligonucleotide inserts were Gibson assembled. ..

    Sequencing:

    Article Title: In situ visualization of m 6 A sites in cellular mRNAs
    Article Snippet: .. To generate TLCV2-APO1-YTH, the APO1-YTH transgene was amplified from pCMV-APOBEC1-YTH (Addgene #131636) and inserted into the TLCV2 backbone (gift from Adam Karpf, Addgene #87360) replacing the CAS9-FLAG sequence. .. To generate TLCV2-APO1-YTH, the APO1-YTH transgene was amplified from pCMV-APOBEC1-YTH (Addgene #131636) and inserted into the TLCV2 backbone (gift from Adam Karpf, Addgene #87360) replacing the CAS9-FLAG sequence.

    Transfection:

    Article Title: TDG is a pig-specific epigenetic regulator with insensitivity to H3K9 and H3K27 demethylation in nuclear transfer embryos
    Article Snippet: Passage 2-5 PFFs were cultured in DMEM medium (Gibco) containing 10% (v/v) fetal bovine serum (Hyclone) for 72 h to induce contact inhibition, and digested by trypsin-EDTA solution to use as donor cells. .. For cell line establishment, PFFs were transfected with TDG-inducible expression vector by using the U023 program on Nucleofector 2b (Lonza), and then selected in culture medium containing 2 μg/mL puromycin for 7 d. The vector construction is based on TLCV2 backbone (Addgene plasmid # 87360). ..

    Article Title: TDG is a pig-specific epigenetic regulator with insensitivity to H3K9 and H3K27 demethylation in nuclear transfer embryos
    Article Snippet: Passage 2-5 PFFs were cultured in DMEM medium (Gibco) containing 10% (v/v) fetal bovine serum (Hyclone) for 72 h to induce contact inhibition, and digested by trypsin-EDTA solution to use as donor cells. .. For cell line establishment, PFFs were transfected with TDG-inducible expression vector by using the U023 program on Nucleofector 2b (Lonza), and then selected in culture medium containing 2 μg/mL puromycin for 7 d. The vector construction is based on TLCV2 backbone (Addgene plasmid # 87360). ..

    Expressing:

    Article Title: TDG is a pig-specific epigenetic regulator with insensitivity to H3K9 and H3K27 demethylation in nuclear transfer embryos
    Article Snippet: Passage 2-5 PFFs were cultured in DMEM medium (Gibco) containing 10% (v/v) fetal bovine serum (Hyclone) for 72 h to induce contact inhibition, and digested by trypsin-EDTA solution to use as donor cells. .. For cell line establishment, PFFs were transfected with TDG-inducible expression vector by using the U023 program on Nucleofector 2b (Lonza), and then selected in culture medium containing 2 μg/mL puromycin for 7 d. The vector construction is based on TLCV2 backbone (Addgene plasmid # 87360). ..

    Article Title: TDG is a pig-specific epigenetic regulator with insensitivity to H3K9 and H3K27 demethylation in nuclear transfer embryos
    Article Snippet: Passage 2-5 PFFs were cultured in DMEM medium (Gibco) containing 10% (v/v) fetal bovine serum (Hyclone) for 72 h to induce contact inhibition, and digested by trypsin-EDTA solution to use as donor cells. .. For cell line establishment, PFFs were transfected with TDG-inducible expression vector by using the U023 program on Nucleofector 2b (Lonza), and then selected in culture medium containing 2 μg/mL puromycin for 7 d. The vector construction is based on TLCV2 backbone (Addgene plasmid # 87360). ..

    Plasmid Preparation:

    Article Title: TDG is a pig-specific epigenetic regulator with insensitivity to H3K9 and H3K27 demethylation in nuclear transfer embryos
    Article Snippet: Passage 2-5 PFFs were cultured in DMEM medium (Gibco) containing 10% (v/v) fetal bovine serum (Hyclone) for 72 h to induce contact inhibition, and digested by trypsin-EDTA solution to use as donor cells. .. For cell line establishment, PFFs were transfected with TDG-inducible expression vector by using the U023 program on Nucleofector 2b (Lonza), and then selected in culture medium containing 2 μg/mL puromycin for 7 d. The vector construction is based on TLCV2 backbone (Addgene plasmid # 87360). ..

    Article Title: Inhibition of Karyopherin β1-Mediated Nuclear Import Disrupts Oncogenic Lineage-Defining Transcription Factor Activity in Small Cell Lung Cancer
    Article Snippet: A gene fragment encoding the KPNB1 protein-coding region was made resistant to siRNA targeting by the introduction of silent mutations at all sequences targeted by the commercial KPNB1 siRNAs used (Karyopherin b1 siRNA(h) (Santa Cruz #sc-35736). .. The gene fragment was synthesized (GenScript) and inserted into the TLCV2 backbone in place of Cas9 using AgeI and BamHI sites (TLCV2 was a gift from Adam Karpf; Addgene plasmid #87360; http://n2t.net/ addgene:87360; RRID:Addgene_87360; RRID:Addgene_8736). ..

    Article Title: TDG is a pig-specific epigenetic regulator with insensitivity to H3K9 and H3K27 demethylation in nuclear transfer embryos
    Article Snippet: Passage 2-5 PFFs were cultured in DMEM medium (Gibco) containing 10% (v/v) fetal bovine serum (Hyclone) for 72 h to induce contact inhibition, and digested by trypsin-EDTA solution to use as donor cells. .. For cell line establishment, PFFs were transfected with TDG-inducible expression vector by using the U023 program on Nucleofector 2b (Lonza), and then selected in culture medium containing 2 μg/mL puromycin for 7 d. The vector construction is based on TLCV2 backbone (Addgene plasmid # 87360). ..

    Clone Assay:

    Article Title: CRISPR-based RNA-binding protein mapping in live cells.
    Article Snippet: RNA-binding proteins (RBPs) are involved in all aspects of RNA metabolism, and RNA-RBP interactions are important for cell homeostasis and viral replication.. The global RNA-binding proteome was recently reported; however, little is known about the proteins that bind to specific RNAs.. In this study, we describe a novel CRISPR-based RNA interaction proteomics method in live cells.

    Cloning:

    Article Title: CRISPR-based RNA-binding protein mapping in live cells.
    Article Snippet: RNA-binding proteins (RBPs) are involved in all aspects of RNA metabolism, and RNA-RBP interactions are important for cell homeostasis and viral replication.. The global RNA-binding proteome was recently reported; however, little is known about the proteins that bind to specific RNAs.. In this study, we describe a novel CRISPR-based RNA interaction proteomics method in live cells.

    Synthesized:

    Article Title: Inhibition of Karyopherin β1-Mediated Nuclear Import Disrupts Oncogenic Lineage-Defining Transcription Factor Activity in Small Cell Lung Cancer
    Article Snippet: A gene fragment encoding the KPNB1 protein-coding region was made resistant to siRNA targeting by the introduction of silent mutations at all sequences targeted by the commercial KPNB1 siRNAs used (Karyopherin b1 siRNA(h) (Santa Cruz #sc-35736). .. The gene fragment was synthesized (GenScript) and inserted into the TLCV2 backbone in place of Cas9 using AgeI and BamHI sites (TLCV2 was a gift from Adam Karpf; Addgene plasmid #87360; http://n2t.net/ addgene:87360; RRID:Addgene_87360; RRID:Addgene_8736). ..



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    Image Search Results


    Journal: iScience

    Article Title: Versatile roles of annexin A4 in clear cell renal cell carcinoma: Impact on membrane repair, transcriptional signatures, and composition of the tumor microenvironment

    doi: 10.1016/j.isci.2025.112198

    Figure Lengend Snippet:

    Article Snippet: Guide sequences (non-targeting – nt-sgRNA-1: 5′- GCGGGCAGAACGACCCTGAC -3', nt-sgRNA-2: 5′- GAAGACGTGCTGGCGTCACC -3'; ANXA4-targeting – ANXA4-sg1: TCTGCTGGCTATAGGTAAGC(TGG), ANXA4-sg2: GGACGATGCTCTCGTGAGAC(AGG) - (PAM sequence in brackets)) were cloned into TLCV2-LoxP backbone (TLCV2-LoxP was a gift from Adam Karpf (Addgene plasmid #127098; http://n2t.net/addgene:127098; RRID:Addgene_127098).

    Techniques: Virus, Generated, Recombinant, Membrane, Electron Microscopy, Saline, Enzyme-linked Immunosorbent Assay, Bicinchoninic Acid Protein Assay, Western Blot, RNA Sequencing, Gene Expression, Imaging, Plasmid Preparation, shRNA, Control, Luciferase, Cloning, Expressing, Software, Cell Analysis, Microscopy, Cell Culture