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rnaseq data  (Biotechnology Information)

 
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    Biotechnology Information rnaseq data
    Rnaseq Data, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/rnaseq+data/data+rna+seq+%E2%80%A2/pm42263120-365-0-12
    Average 86 stars, based on 1 article reviews
    rnaseq data - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    other:

    Article Title: Transcription-metabolism association analysis of molecular mechanisms in sweet orange plants in response to boron deficiency.
    Article Snippet: The RNASeq data are publicly available at the National Center for Biotechnology Information.

    RNA sequencing:

    Article Title: Widespread male-female expression imbalance of X-linked genes across phrynosomatid lizards
    Article Snippet: .. RNAseq data underlying this article will be made available through the National Center for Biotechnology Information (NCBI) Short Read Archive upon acceptance. ..

    Article Title: From Neuropeptides to Toxins: Illuminating the Origins of Venom Complexity in Cone Snails
    Article Snippet: The C. textile assemblies generated by this study is achieved under National Center for Biotechnology Information (NCBI) GenBank (accession number pending). .. RNAseq data from C. textile and C. cordigera is deposited at National Center for Biotechnology Information (NCBI) GenBank. (accession numbers pending). ..

    Article Title: Amino acid transporter OsAAP8 mediates rice tillering and height by regulating the transport of neutral amino acids.
    Article Snippet: Amino acids, which serve as the main source of organic nitrogen, are typically transported within plants via amino acid transporter proteins.. In this research, we discovered haplotype variations in the promoter sequence of amino acid transporter OsAAP8 among rice germplasm resources.. Notably, we observed that OsAAP8 expression was significantly elevated in indica rice varieties.

    Article Title: Cell-based ZNT8 assay
    Article Snippet: .. The RNAseq data are available under an accession number of GSE134122 from Gene Expression Omnibus (GEO) of National Center for Biotechnology Information. ..

    Article Title: Inactivation of β-1,3-glucan synthase-like 5 confers broad-spectrum resistance to Plasmodiophora brassicae pathotypes in cruciferous plants.
    Article Snippet: .. The RNAseq data generated from this study are available under the accession number PRJNA1142741 from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI-GEO) database. ..

    Article Title: Candidate gene analysis of cabbage head-splitting resistance based on QTL mapping and omics profiling
    Article Snippet: RNA-seq analysis, including RNA isolation, detection, cDNA library construction, and paired-end sequencing, was performed by Biomarker Technologies Co., Ltd. (Beijing, China). .. The raw RNAseq data has been deposited in the National Center for Biotechnology Information (NCBI) Sequence Read Archive under PRJNA1222095. ..

    Gene Expression:

    Article Title: Cell-based ZNT8 assay
    Article Snippet: .. The RNAseq data are available under an accession number of GSE134122 from Gene Expression Omnibus (GEO) of National Center for Biotechnology Information. ..

    Article Title: Inactivation of β-1,3-glucan synthase-like 5 confers broad-spectrum resistance to Plasmodiophora brassicae pathotypes in cruciferous plants.
    Article Snippet: .. The RNAseq data generated from this study are available under the accession number PRJNA1142741 from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI-GEO) database. ..

    Generated:

    Article Title: Inactivation of β-1,3-glucan synthase-like 5 confers broad-spectrum resistance to Plasmodiophora brassicae pathotypes in cruciferous plants.
    Article Snippet: .. The RNAseq data generated from this study are available under the accession number PRJNA1142741 from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI-GEO) database. ..

    Sequencing:

    Article Title: Candidate gene analysis of cabbage head-splitting resistance based on QTL mapping and omics profiling
    Article Snippet: RNA-seq analysis, including RNA isolation, detection, cDNA library construction, and paired-end sequencing, was performed by Biomarker Technologies Co., Ltd. (Beijing, China). .. The raw RNAseq data has been deposited in the National Center for Biotechnology Information (NCBI) Sequence Read Archive under PRJNA1222095. ..



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    Co-cultures of GFP2-Display-expressing HIV-1-infected (NLCI JRFL Env) A3.01 cells and GFP1-Display- and CCR5-expressing A3R5.7 target cells were surface-stained for the proteins shown and analyzed by spectral flow cytometry on a Cytek Aurora instrument. Live cells were identified and gated for infection using the mCherry reporter and syncytia were identified as mCherry+GFP+. The values corresponding to each surface protein of interest were normalized to cell size by dividing by the forward scatter height (FSC-H) parameter. (A) UMAP analysis was performed on the resulting datasets, excluding mCherry and GFP so as to not bias the clustering of cell subsets. In other words, the UMAP algorithm was given no information on which cells were uninfected, infected mononucleated, or syncytia. (B) Histograms of each surface protein stained for in the panels, with each cell subset shown as separate overlays. ( C ) Differential gene expression analysis of isolated syncytia VS and isolated infected mononucleated cells. Shown in yellow are genes involved in inflammatory responses and apoptosis. <t>(RNAseq</t> analyses performed <t>by</t> <t>Plasmidsaurus</t> for C ).
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    Co-cultures of GFP2-Display-expressing HIV-1-infected (NLCI JRFL Env) A3.01 cells and GFP1-Display- and CCR5-expressing A3R5.7 target cells were surface-stained for the proteins shown and analyzed by spectral flow cytometry on a Cytek Aurora instrument. Live cells were identified and gated for infection using the mCherry reporter and syncytia were identified as mCherry+GFP+. The values corresponding to each surface protein of interest were normalized to cell size by dividing by the forward scatter height (FSC-H) parameter. (A) UMAP analysis was performed on the resulting datasets, excluding mCherry and GFP so as to not bias the clustering of cell subsets. In other words, the UMAP algorithm was given no information on which cells were uninfected, infected mononucleated, or syncytia. (B) Histograms of each surface protein stained for in the panels, with each cell subset shown as separate overlays. ( C ) Differential gene expression analysis of isolated syncytia VS and isolated infected mononucleated cells. Shown in yellow are genes involved in inflammatory responses and apoptosis. <t>(RNAseq</t> analyses performed <t>by</t> <t>Plasmidsaurus</t> for C ).
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    Image Search Results


    Co-cultures of GFP2-Display-expressing HIV-1-infected (NLCI JRFL Env) A3.01 cells and GFP1-Display- and CCR5-expressing A3R5.7 target cells were surface-stained for the proteins shown and analyzed by spectral flow cytometry on a Cytek Aurora instrument. Live cells were identified and gated for infection using the mCherry reporter and syncytia were identified as mCherry+GFP+. The values corresponding to each surface protein of interest were normalized to cell size by dividing by the forward scatter height (FSC-H) parameter. (A) UMAP analysis was performed on the resulting datasets, excluding mCherry and GFP so as to not bias the clustering of cell subsets. In other words, the UMAP algorithm was given no information on which cells were uninfected, infected mononucleated, or syncytia. (B) Histograms of each surface protein stained for in the panels, with each cell subset shown as separate overlays. ( C ) Differential gene expression analysis of isolated syncytia VS and isolated infected mononucleated cells. Shown in yellow are genes involved in inflammatory responses and apoptosis. (RNAseq analyses performed by Plasmidsaurus for C ).

    Journal: bioRxiv

    Article Title: HIV-1-induced small T cell syncytia: susceptibility to direct NK cell killing

    doi: 10.64898/2026.06.14.732158

    Figure Lengend Snippet: Co-cultures of GFP2-Display-expressing HIV-1-infected (NLCI JRFL Env) A3.01 cells and GFP1-Display- and CCR5-expressing A3R5.7 target cells were surface-stained for the proteins shown and analyzed by spectral flow cytometry on a Cytek Aurora instrument. Live cells were identified and gated for infection using the mCherry reporter and syncytia were identified as mCherry+GFP+. The values corresponding to each surface protein of interest were normalized to cell size by dividing by the forward scatter height (FSC-H) parameter. (A) UMAP analysis was performed on the resulting datasets, excluding mCherry and GFP so as to not bias the clustering of cell subsets. In other words, the UMAP algorithm was given no information on which cells were uninfected, infected mononucleated, or syncytia. (B) Histograms of each surface protein stained for in the panels, with each cell subset shown as separate overlays. ( C ) Differential gene expression analysis of isolated syncytia VS and isolated infected mononucleated cells. Shown in yellow are genes involved in inflammatory responses and apoptosis. (RNAseq analyses performed by Plasmidsaurus for C ).

    Article Snippet: RNAseq analysis was done by Plasmidsaurus and all RNAseq data figures were generated using their online interface.

    Techniques: Expressing, Infection, Staining, Flow Cytometry, Gene Expression, Isolation, RNA sequencing