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rna seq  (Azenta)

 
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    Azenta rna seq
    Rna Seq, supplied by Azenta, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/rna seq/product/Azenta
    Average 86 stars, based on 1 article reviews
    rna seq - by Bioz Stars, 2026-06
    86/100 stars

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    Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
    Kapa Stranded Rna Seq Library Prep Kit, supplied by Roche, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
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    Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
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    Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
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    Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
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    Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® <t>using</t> <t>RNA-seq</t> service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.
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    Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® <t>using</t> <t>RNA-seq</t> service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.
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    Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® <t>using</t> <t>RNA-seq</t> service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.
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    https://www.bioz.com/result/nebnext ultra ii directional rna seq kit/product/New England Biolabs
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    Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® <t>using</t> <t>RNA-seq</t> service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.
    Vahts Universal V10 Rna Seq Library Prep Kit, supplied by Vazyme Biotech Co, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Image Search Results


    Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA sequences. RNA-seq was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.

    Journal: Bioactive Materials

    Article Title: Small extracellular vesicle-integrated by herbal hydrogels for spatiotemporal immunomodulation and neurovascular repair following traumatic brain injury

    doi: 10.1016/j.bioactmat.2026.02.056

    Figure Lengend Snippet: Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA sequences. RNA-seq was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.

    Article Snippet: For library construction, 1–2 μg of total RNA per sample was used. mRNA was enriched using oligo (dT) selection, and libraries were prepared using the KAPA Stranded RNA-Seq Library Prep Kit (Roche).

    Techniques: Expressing, RNA Sequencing, Quantitative Proteomics

    Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® using RNA-seq service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.

    Journal: Metabolic Engineering Communications

    Article Title: Elucidating biodegradation of dimethyl terephthalate by two Rhodococcus strains for its valorization applications

    doi: 10.1016/j.mec.2026.e00271

    Figure Lengend Snippet: Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® using RNA-seq service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.

    Article Snippet: Transcriptomic data were generated by Genewiz® using RNA-seq service.

    Techniques: Gene Expression, Generated, RNA Sequencing, Control, Cell Culture, Software