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recombination detection program rdp  (Simplot Science)

 
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    Simplot Science recombination detection program rdp
    Recombination Detection Program Rdp, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/recombination detection program rdp/product/Simplot Science
    Average 90 stars, based on 1 article reviews
    recombination detection program rdp - by Bioz Stars, 2026-04
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    Genetic recombination events of GNU-2353 and GNU-2377 detected by RDP4 software.

    Journal: Transboundary and Emerging Diseases

    Article Title: Comparative Genomic and Biological Investigation of NADC30- and NADC34-Like PRRSV Strains Isolated in South Korea

    doi: 10.1155/tbed/9015349

    Figure Lengend Snippet: Genetic recombination events of GNU-2353 and GNU-2377 detected by RDP4 software.

    Article Snippet: Potential recombination events were analyzed using recombination detection program (RDP), SimPlot, and phylogeny, as described previously [ ].

    Techniques: Software

    Sequence and analysis of the entire GL18 strain genome. (A) Phylogenetic analysis of σC gene sequences of ARVs isolates with the maximum-likelihood method. (B) Amino acid sequence alignment of the σC protein of GL18 with Chinese DRV isolates. (C) Gene recombination event prediction by RDP. (D) Verification of gene recombination by Simplot.

    Journal: Poultry Science

    Article Title: Isolation and characterization of a duck reovirus strain from mature ducks in China

    doi: 10.1016/j.psj.2022.102345

    Figure Lengend Snippet: Sequence and analysis of the entire GL18 strain genome. (A) Phylogenetic analysis of σC gene sequences of ARVs isolates with the maximum-likelihood method. (B) Amino acid sequence alignment of the σC protein of GL18 with Chinese DRV isolates. (C) Gene recombination event prediction by RDP. (D) Verification of gene recombination by Simplot.

    Article Snippet: The Recombination Detection Program ( RDP ) and SimPlot program analyses suggested potential genetic recombination events in the M2 segments.

    Techniques: Sequencing