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Broad Institute Inc
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Journal: Molecular Systems Biology
Article Title: Human disease locus discovery and mapping to molecular pathways through phylogenetic profiling
doi: 10.1038/msb.2013.50
Figure Lengend Snippet: Number and percentage of significant coevolved MSigDB groups in different methods
Article Snippet: These gene sets include genes that are significantly changed in expression in tumors ( ; ; ), gene coexpressed under similar conditions, genes that bear similar transcriptional or miRNA regulatory sequences ( ; ), or genes annotated to function in similar processes based on the pathway and ontology databases such as GO , KEGG ,
Techniques:
Journal: Nucleic Acids Research
Article Title: WhichGenes: a web-based tool for gathering, building, storing and exporting gene sets with application in gene set enrichment analysis
doi: 10.1093/nar/gkp263
Figure Lengend Snippet: Data sources used by WhichGenes to automatically construct gene sets
Article Snippet: WhichGenes currently supports queries about Homo sapiens and Mus musculus organisms by retrieving up-to-date gene lists directly coming from multiple databases, currently including Ensembl,
Techniques: Construct