Sequencing:Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Overexpression of homeodomain-interacting protein kinase 2 (HIPK2) attenuates sepsis-mediated liver injury by restoring autophagy
Article Snippet: For further studies, primary hepatocytes were co-transfected with the internal control vector pmir-GLO (Promega) and pmir-GLO-HIPK2 3′-UTR using the Lipofectamine 2000 reagent (Thermo Fisher Scientific) for 20 h, followed by an incubation with the indicated chemicals for 10 h. Similarly, hepatocytes were co-transfected with the empty vector pGL-3 basic (Promega) and the pGL-3 vector containing the HIPK2 promoter using the Lipofectamine 2000 reagent for 20 h; the pRL vector was used as an internal control.
Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5′-GCGACGCGTAGTGATTTGTAGAAAAGACCACATGA-3′, MluI; pGL3–1036 FW: 5′-GCGACGCGTGGGGTAACTTTACCATAACCTGG-3′, MluI; pGL3–306 FW: 5′-GCGACGCGTTCAGGAAGGTGTGTGGGAA-3′, MluI; pGL3–306 RV: 5′-GCGGTCGACCTTGGCTTCTGCTCGCAG-3′, SalI; RR-I FW: 5′-GCGGGATCCTAAAGGGACAAGCTTGGGCT-3′, XhoI; RR-I RV: 5′-GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3′, BglII; RR-5′ FW: 5′-GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3′, KpnI; RR-5′ RV: 5′-GCGGGTACCCAAACTTCAAAAACATCATGCTA-3′, KpnI; RR-3′ FW: 5′-GTCGACGTTCTTCTCGCAGAGCCTCA-3′, SalI; RR-3′ RV: 5′-GTCGACAAGTCGGGGAAAGGGATTATT-3′, SalI; RR-1/-3 FW: 5′-GCGGGTACCAGAAGTTTACCCAGCTCACCA-3′, KpnI; RR-1/-2 RV: 5′-GCGGGTACCACTCACTGTGGTAAGCATTCATT-3′, KpnI; RR-2 FW: 5′-GCGGGTACCCTGCCCAGACTGTAGATAAACG-3′, KpnI; RR-3 RV: 5′-GCGGGTACCTTATCTACAGTCTGGGCAGAACA-3′, KpnI; exon 1 FW: 5′-GCGCTCGAGTACCTGTGCCACCTCCG-3′, XhoI; exon 1 RV: 5′-GCGAAGCTTAGTTTCCGCAAGGAGGAC-3′, HindIII).
Article Title: PPARγ attenuates hypoxia-induced hypertrophic transcriptional pathways in the heart
Article Snippet: This NFAT-Luc construct was designed using nine copies of an NFAT binding site from the IL-4 promoter (5’-TGGAAAATT-3’) positioned 5’ to a minimal promoter from the alpha-myosin heavy chain gene (–164 to +16) and inserted upstream of the luciferase reporter in pGL-3 Basic (Promega Corporation, Madison, WI, USA) to create NFAT-luc.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5 -GCGACGCGTAGT GATTTGTAGAAAAGACCACATGA-3 , MluI; pGL3–1036 FW: 5 -GCGACGCGTGGGGTAACTTTACCATAACCTGG-3 , MluI; pGL3–306 FW: 5 -GCGACGCGTTCAGGAAGGTGTGTGGGAA-3 , MluI; pGL3– 306 RV: 5 -GCGGTCGACCTTGGCTTCTGCTCGCAG-3 , SalI; RR-I FW: 5 -GCGGGATCCTAAAGGGACAAGCTTGGGCT-3 , XhoI; RR-I RV: 5 - GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3 , BglII; RR-5 FW: 5 -GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3 , KpnI; RR-5 RV: 5 -GCGGGTACCCAAACTTCAAAAACATCATGCTA-3 , KpnI; RR-3 FW: 5 -GTCGACGTTCTTCTCGCAGAGCCTCA-3 , SalI; RR-3 RV: 5 -GTCGACAAGTCGGGGAAAGGGATTATT-3 , SalI; RR1/-3 FW: 5 -GCGGGTACCAGAAGTTTACCCAGCTCACCA-3 , KpnI; RR-1/-2 RV: 5 -GCGGGTACCACTCACTGTGGTAAGCATTCATT-3 , KpnI; RR-2 FW: 5 -GCGGGTACCCTGCCCAGACTGTAGATAAACG-3 , KpnI; RR-3 RV: 5 -GCGGGTACCTTATCTACAGTCTGGGCAGAACA3 , KpnI; exon 1 FW: 5 -GCGCTCGAGTACCTGTGCCACCTCCG-3 , XhoI; exon 1 RV: 5 -GCGAAGCTTAGTTTCCGCAAGGAGGAC-3 , HindIII).
Amplification:Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Overexpression of homeodomain-interacting protein kinase 2 (HIPK2) attenuates sepsis-mediated liver injury by restoring autophagy
Article Snippet: For further studies, primary hepatocytes were co-transfected with the internal control vector pmir-GLO (Promega) and pmir-GLO-HIPK2 3′-UTR using the Lipofectamine 2000 reagent (Thermo Fisher Scientific) for 20 h, followed by an incubation with the indicated chemicals for 10 h. Similarly, hepatocytes were co-transfected with the empty vector pGL-3 basic (Promega) and the pGL-3 vector containing the HIPK2 promoter using the Lipofectamine 2000 reagent for 20 h; the pRL vector was used as an internal control.
Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5′-GCGACGCGTAGTGATTTGTAGAAAAGACCACATGA-3′, MluI; pGL3–1036 FW: 5′-GCGACGCGTGGGGTAACTTTACCATAACCTGG-3′, MluI; pGL3–306 FW: 5′-GCGACGCGTTCAGGAAGGTGTGTGGGAA-3′, MluI; pGL3–306 RV: 5′-GCGGTCGACCTTGGCTTCTGCTCGCAG-3′, SalI; RR-I FW: 5′-GCGGGATCCTAAAGGGACAAGCTTGGGCT-3′, XhoI; RR-I RV: 5′-GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3′, BglII; RR-5′ FW: 5′-GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3′, KpnI; RR-5′ RV: 5′-GCGGGTACCCAAACTTCAAAAACATCATGCTA-3′, KpnI; RR-3′ FW: 5′-GTCGACGTTCTTCTCGCAGAGCCTCA-3′, SalI; RR-3′ RV: 5′-GTCGACAAGTCGGGGAAAGGGATTATT-3′, SalI; RR-1/-3 FW: 5′-GCGGGTACCAGAAGTTTACCCAGCTCACCA-3′, KpnI; RR-1/-2 RV: 5′-GCGGGTACCACTCACTGTGGTAAGCATTCATT-3′, KpnI; RR-2 FW: 5′-GCGGGTACCCTGCCCAGACTGTAGATAAACG-3′, KpnI; RR-3 RV: 5′-GCGGGTACCTTATCTACAGTCTGGGCAGAACA-3′, KpnI; exon 1 FW: 5′-GCGCTCGAGTACCTGTGCCACCTCCG-3′, XhoI; exon 1 RV: 5′-GCGAAGCTTAGTTTCCGCAAGGAGGAC-3′, HindIII).
Article Title: PPARγ attenuates hypoxia-induced hypertrophic transcriptional pathways in the heart
Article Snippet: This NFAT-Luc construct was designed using nine copies of an NFAT binding site from the IL-4 promoter (5’-TGGAAAATT-3’) positioned 5’ to a minimal promoter from the alpha-myosin heavy chain gene (–164 to +16) and inserted upstream of the luciferase reporter in pGL-3 Basic (Promega Corporation, Madison, WI, USA) to create NFAT-luc.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5 -GCGACGCGTAGT GATTTGTAGAAAAGACCACATGA-3 , MluI; pGL3–1036 FW: 5 -GCGACGCGTGGGGTAACTTTACCATAACCTGG-3 , MluI; pGL3–306 FW: 5 -GCGACGCGTTCAGGAAGGTGTGTGGGAA-3 , MluI; pGL3– 306 RV: 5 -GCGGTCGACCTTGGCTTCTGCTCGCAG-3 , SalI; RR-I FW: 5 -GCGGGATCCTAAAGGGACAAGCTTGGGCT-3 , XhoI; RR-I RV: 5 - GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3 , BglII; RR-5 FW: 5 -GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3 , KpnI; RR-5 RV: 5 -GCGGGTACCCAAACTTCAAAAACATCATGCTA-3 , KpnI; RR-3 FW: 5 -GTCGACGTTCTTCTCGCAGAGCCTCA-3 , SalI; RR-3 RV: 5 -GTCGACAAGTCGGGGAAAGGGATTATT-3 , SalI; RR1/-3 FW: 5 -GCGGGTACCAGAAGTTTACCCAGCTCACCA-3 , KpnI; RR-1/-2 RV: 5 -GCGGGTACCACTCACTGTGGTAAGCATTCATT-3 , KpnI; RR-2 FW: 5 -GCGGGTACCCTGCCCAGACTGTAGATAAACG-3 , KpnI; RR-3 RV: 5 -GCGGGTACCTTATCTACAGTCTGGGCAGAACA3 , KpnI; exon 1 FW: 5 -GCGCTCGAGTACCTGTGCCACCTCCG-3 , XhoI; exon 1 RV: 5 -GCGAAGCTTAGTTTCCGCAAGGAGGAC-3 , HindIII).
Polymerase Chain Reaction:Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Overexpression of homeodomain-interacting protein kinase 2 (HIPK2) attenuates sepsis-mediated liver injury by restoring autophagy
Article Snippet: For further studies, primary hepatocytes were co-transfected with the internal control vector pmir-GLO (Promega) and pmir-GLO-HIPK2 3′-UTR using the Lipofectamine 2000 reagent (Thermo Fisher Scientific) for 20 h, followed by an incubation with the indicated chemicals for 10 h. Similarly, hepatocytes were co-transfected with the empty vector pGL-3 basic (Promega) and the pGL-3 vector containing the HIPK2 promoter using the Lipofectamine 2000 reagent for 20 h; the pRL vector was used as an internal control.
Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5′-GCGACGCGTAGTGATTTGTAGAAAAGACCACATGA-3′, MluI; pGL3–1036 FW: 5′-GCGACGCGTGGGGTAACTTTACCATAACCTGG-3′, MluI; pGL3–306 FW: 5′-GCGACGCGTTCAGGAAGGTGTGTGGGAA-3′, MluI; pGL3–306 RV: 5′-GCGGTCGACCTTGGCTTCTGCTCGCAG-3′, SalI; RR-I FW: 5′-GCGGGATCCTAAAGGGACAAGCTTGGGCT-3′, XhoI; RR-I RV: 5′-GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3′, BglII; RR-5′ FW: 5′-GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3′, KpnI; RR-5′ RV: 5′-GCGGGTACCCAAACTTCAAAAACATCATGCTA-3′, KpnI; RR-3′ FW: 5′-GTCGACGTTCTTCTCGCAGAGCCTCA-3′, SalI; RR-3′ RV: 5′-GTCGACAAGTCGGGGAAAGGGATTATT-3′, SalI; RR-1/-3 FW: 5′-GCGGGTACCAGAAGTTTACCCAGCTCACCA-3′, KpnI; RR-1/-2 RV: 5′-GCGGGTACCACTCACTGTGGTAAGCATTCATT-3′, KpnI; RR-2 FW: 5′-GCGGGTACCCTGCCCAGACTGTAGATAAACG-3′, KpnI; RR-3 RV: 5′-GCGGGTACCTTATCTACAGTCTGGGCAGAACA-3′, KpnI; exon 1 FW: 5′-GCGCTCGAGTACCTGTGCCACCTCCG-3′, XhoI; exon 1 RV: 5′-GCGAAGCTTAGTTTCCGCAAGGAGGAC-3′, HindIII).
Article Title: PPARγ attenuates hypoxia-induced hypertrophic transcriptional pathways in the heart
Article Snippet: This NFAT-Luc construct was designed using nine copies of an NFAT binding site from the IL-4 promoter (5’-TGGAAAATT-3’) positioned 5’ to a minimal promoter from the alpha-myosin heavy chain gene (–164 to +16) and inserted upstream of the luciferase reporter in pGL-3 Basic (Promega Corporation, Madison, WI, USA) to create NFAT-luc.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5 -GCGACGCGTAGT GATTTGTAGAAAAGACCACATGA-3 , MluI; pGL3–1036 FW: 5 -GCGACGCGTGGGGTAACTTTACCATAACCTGG-3 , MluI; pGL3–306 FW: 5 -GCGACGCGTTCAGGAAGGTGTGTGGGAA-3 , MluI; pGL3– 306 RV: 5 -GCGGTCGACCTTGGCTTCTGCTCGCAG-3 , SalI; RR-I FW: 5 -GCGGGATCCTAAAGGGACAAGCTTGGGCT-3 , XhoI; RR-I RV: 5 - GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3 , BglII; RR-5 FW: 5 -GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3 , KpnI; RR-5 RV: 5 -GCGGGTACCCAAACTTCAAAAACATCATGCTA-3 , KpnI; RR-3 FW: 5 -GTCGACGTTCTTCTCGCAGAGCCTCA-3 , SalI; RR-3 RV: 5 -GTCGACAAGTCGGGGAAAGGGATTATT-3 , SalI; RR1/-3 FW: 5 -GCGGGTACCAGAAGTTTACCCAGCTCACCA-3 , KpnI; RR-1/-2 RV: 5 -GCGGGTACCACTCACTGTGGTAAGCATTCATT-3 , KpnI; RR-2 FW: 5 -GCGGGTACCCTGCCCAGACTGTAGATAAACG-3 , KpnI; RR-3 RV: 5 -GCGGGTACCTTATCTACAGTCTGGGCAGAACA3 , KpnI; exon 1 FW: 5 -GCGCTCGAGTACCTGTGCCACCTCCG-3 , XhoI; exon 1 RV: 5 -GCGAAGCTTAGTTTCCGCAAGGAGGAC-3 , HindIII).
Luciferase:Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Overexpression of homeodomain-interacting protein kinase 2 (HIPK2) attenuates sepsis-mediated liver injury by restoring autophagy
Article Snippet: For further studies, primary hepatocytes were co-transfected with the internal control vector pmir-GLO (Promega) and pmir-GLO-HIPK2 3′-UTR using the Lipofectamine 2000 reagent (Thermo Fisher Scientific) for 20 h, followed by an incubation with the indicated chemicals for 10 h. Similarly, hepatocytes were co-transfected with the empty vector pGL-3 basic (Promega) and the pGL-3 vector containing the HIPK2 promoter using the Lipofectamine 2000 reagent for 20 h; the pRL vector was used as an internal control.
Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5′-GCGACGCGTAGTGATTTGTAGAAAAGACCACATGA-3′, MluI; pGL3–1036 FW: 5′-GCGACGCGTGGGGTAACTTTACCATAACCTGG-3′, MluI; pGL3–306 FW: 5′-GCGACGCGTTCAGGAAGGTGTGTGGGAA-3′, MluI; pGL3–306 RV: 5′-GCGGTCGACCTTGGCTTCTGCTCGCAG-3′, SalI; RR-I FW: 5′-GCGGGATCCTAAAGGGACAAGCTTGGGCT-3′, XhoI; RR-I RV: 5′-GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3′, BglII; RR-5′ FW: 5′-GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3′, KpnI; RR-5′ RV: 5′-GCGGGTACCCAAACTTCAAAAACATCATGCTA-3′, KpnI; RR-3′ FW: 5′-GTCGACGTTCTTCTCGCAGAGCCTCA-3′, SalI; RR-3′ RV: 5′-GTCGACAAGTCGGGGAAAGGGATTATT-3′, SalI; RR-1/-3 FW: 5′-GCGGGTACCAGAAGTTTACCCAGCTCACCA-3′, KpnI; RR-1/-2 RV: 5′-GCGGGTACCACTCACTGTGGTAAGCATTCATT-3′, KpnI; RR-2 FW: 5′-GCGGGTACCCTGCCCAGACTGTAGATAAACG-3′, KpnI; RR-3 RV: 5′-GCGGGTACCTTATCTACAGTCTGGGCAGAACA-3′, KpnI; exon 1 FW: 5′-GCGCTCGAGTACCTGTGCCACCTCCG-3′, XhoI; exon 1 RV: 5′-GCGAAGCTTAGTTTCCGCAAGGAGGAC-3′, HindIII).
Article Title: PPARγ attenuates hypoxia-induced hypertrophic transcriptional pathways in the heart
Article Snippet: This NFAT-Luc construct was designed using nine copies of an NFAT binding site from the IL-4 promoter (5’-TGGAAAATT-3’) positioned 5’ to a minimal promoter from the alpha-myosin heavy chain gene (–164 to +16) and inserted upstream of the luciferase reporter in pGL-3 Basic (Promega Corporation, Madison, WI, USA) to create NFAT-luc.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5 -GCGACGCGTAGT GATTTGTAGAAAAGACCACATGA-3 , MluI; pGL3–1036 FW: 5 -GCGACGCGTGGGGTAACTTTACCATAACCTGG-3 , MluI; pGL3–306 FW: 5 -GCGACGCGTTCAGGAAGGTGTGTGGGAA-3 , MluI; pGL3– 306 RV: 5 -GCGGTCGACCTTGGCTTCTGCTCGCAG-3 , SalI; RR-I FW: 5 -GCGGGATCCTAAAGGGACAAGCTTGGGCT-3 , XhoI; RR-I RV: 5 - GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3 , BglII; RR-5 FW: 5 -GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3 , KpnI; RR-5 RV: 5 -GCGGGTACCCAAACTTCAAAAACATCATGCTA-3 , KpnI; RR-3 FW: 5 -GTCGACGTTCTTCTCGCAGAGCCTCA-3 , SalI; RR-3 RV: 5 -GTCGACAAGTCGGGGAAAGGGATTATT-3 , SalI; RR1/-3 FW: 5 -GCGGGTACCAGAAGTTTACCCAGCTCACCA-3 , KpnI; RR-1/-2 RV: 5 -GCGGGTACCACTCACTGTGGTAAGCATTCATT-3 , KpnI; RR-2 FW: 5 -GCGGGTACCCTGCCCAGACTGTAGATAAACG-3 , KpnI; RR-3 RV: 5 -GCGGGTACCTTATCTACAGTCTGGGCAGAACA3 , KpnI; exon 1 FW: 5 -GCGCTCGAGTACCTGTGCCACCTCCG-3 , XhoI; exon 1 RV: 5 -GCGAAGCTTAGTTTCCGCAAGGAGGAC-3 , HindIII).
Plasmid Preparation:Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Overexpression of homeodomain-interacting protein kinase 2 (HIPK2) attenuates sepsis-mediated liver injury by restoring autophagy
Article Snippet: For further studies, primary hepatocytes were co-transfected with the internal control vector pmir-GLO (Promega) and pmir-GLO-HIPK2 3′-UTR using the Lipofectamine 2000 reagent (Thermo Fisher Scientific) for 20 h, followed by an incubation with the indicated chemicals for 10 h. Similarly, hepatocytes were co-transfected with the empty vector pGL-3 basic (Promega) and the pGL-3 vector containing the HIPK2 promoter using the Lipofectamine 2000 reagent for 20 h; the pRL vector was used as an internal control.
Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5′-GCGACGCGTAGTGATTTGTAGAAAAGACCACATGA-3′, MluI; pGL3–1036 FW: 5′-GCGACGCGTGGGGTAACTTTACCATAACCTGG-3′, MluI; pGL3–306 FW: 5′-GCGACGCGTTCAGGAAGGTGTGTGGGAA-3′, MluI; pGL3–306 RV: 5′-GCGGTCGACCTTGGCTTCTGCTCGCAG-3′, SalI; RR-I FW: 5′-GCGGGATCCTAAAGGGACAAGCTTGGGCT-3′, XhoI; RR-I RV: 5′-GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3′, BglII; RR-5′ FW: 5′-GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3′, KpnI; RR-5′ RV: 5′-GCGGGTACCCAAACTTCAAAAACATCATGCTA-3′, KpnI; RR-3′ FW: 5′-GTCGACGTTCTTCTCGCAGAGCCTCA-3′, SalI; RR-3′ RV: 5′-GTCGACAAGTCGGGGAAAGGGATTATT-3′, SalI; RR-1/-3 FW: 5′-GCGGGTACCAGAAGTTTACCCAGCTCACCA-3′, KpnI; RR-1/-2 RV: 5′-GCGGGTACCACTCACTGTGGTAAGCATTCATT-3′, KpnI; RR-2 FW: 5′-GCGGGTACCCTGCCCAGACTGTAGATAAACG-3′, KpnI; RR-3 RV: 5′-GCGGGTACCTTATCTACAGTCTGGGCAGAACA-3′, KpnI; exon 1 FW: 5′-GCGCTCGAGTACCTGTGCCACCTCCG-3′, XhoI; exon 1 RV: 5′-GCGAAGCTTAGTTTCCGCAAGGAGGAC-3′, HindIII).
Article Title: PPARγ attenuates hypoxia-induced hypertrophic transcriptional pathways in the heart
Article Snippet: This NFAT-Luc construct was designed using nine copies of an NFAT binding site from the IL-4 promoter (5’-TGGAAAATT-3’) positioned 5’ to a minimal promoter from the alpha-myosin heavy chain gene (–164 to +16) and inserted upstream of the luciferase reporter in pGL-3 Basic (Promega Corporation, Madison, WI, USA) to create NFAT-luc.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5 -GCGACGCGTAGT GATTTGTAGAAAAGACCACATGA-3 , MluI; pGL3–1036 FW: 5 -GCGACGCGTGGGGTAACTTTACCATAACCTGG-3 , MluI; pGL3–306 FW: 5 -GCGACGCGTTCAGGAAGGTGTGTGGGAA-3 , MluI; pGL3– 306 RV: 5 -GCGGTCGACCTTGGCTTCTGCTCGCAG-3 , SalI; RR-I FW: 5 -GCGGGATCCTAAAGGGACAAGCTTGGGCT-3 , XhoI; RR-I RV: 5 - GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3 , BglII; RR-5 FW: 5 -GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3 , KpnI; RR-5 RV: 5 -GCGGGTACCCAAACTTCAAAAACATCATGCTA-3 , KpnI; RR-3 FW: 5 -GTCGACGTTCTTCTCGCAGAGCCTCA-3 , SalI; RR-3 RV: 5 -GTCGACAAGTCGGGGAAAGGGATTATT-3 , SalI; RR1/-3 FW: 5 -GCGGGTACCAGAAGTTTACCCAGCTCACCA-3 , KpnI; RR-1/-2 RV: 5 -GCGGGTACCACTCACTGTGGTAAGCATTCATT-3 , KpnI; RR-2 FW: 5 -GCGGGTACCCTGCCCAGACTGTAGATAAACG-3 , KpnI; RR-3 RV: 5 -GCGGGTACCTTATCTACAGTCTGGGCAGAACA3 , KpnI; exon 1 FW: 5 -GCGCTCGAGTACCTGTGCCACCTCCG-3 , XhoI; exon 1 RV: 5 -GCGAAGCTTAGTTTCCGCAAGGAGGAC-3 , HindIII).
Clone Assay:Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Overexpression of homeodomain-interacting protein kinase 2 (HIPK2) attenuates sepsis-mediated liver injury by restoring autophagy
Article Snippet: For further studies, primary hepatocytes were co-transfected with the internal control vector pmir-GLO (Promega) and pmir-GLO-HIPK2 3′-UTR using the Lipofectamine 2000 reagent (Thermo Fisher Scientific) for 20 h, followed by an incubation with the indicated chemicals for 10 h. Similarly, hepatocytes were co-transfected with the empty vector pGL-3 basic (Promega) and the pGL-3 vector containing the HIPK2 promoter using the Lipofectamine 2000 reagent for 20 h; the pRL vector was used as an internal control.
Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5′-GCGACGCGTAGTGATTTGTAGAAAAGACCACATGA-3′, MluI; pGL3–1036 FW: 5′-GCGACGCGTGGGGTAACTTTACCATAACCTGG-3′, MluI; pGL3–306 FW: 5′-GCGACGCGTTCAGGAAGGTGTGTGGGAA-3′, MluI; pGL3–306 RV: 5′-GCGGTCGACCTTGGCTTCTGCTCGCAG-3′, SalI; RR-I FW: 5′-GCGGGATCCTAAAGGGACAAGCTTGGGCT-3′, XhoI; RR-I RV: 5′-GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3′, BglII; RR-5′ FW: 5′-GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3′, KpnI; RR-5′ RV: 5′-GCGGGTACCCAAACTTCAAAAACATCATGCTA-3′, KpnI; RR-3′ FW: 5′-GTCGACGTTCTTCTCGCAGAGCCTCA-3′, SalI; RR-3′ RV: 5′-GTCGACAAGTCGGGGAAAGGGATTATT-3′, SalI; RR-1/-3 FW: 5′-GCGGGTACCAGAAGTTTACCCAGCTCACCA-3′, KpnI; RR-1/-2 RV: 5′-GCGGGTACCACTCACTGTGGTAAGCATTCATT-3′, KpnI; RR-2 FW: 5′-GCGGGTACCCTGCCCAGACTGTAGATAAACG-3′, KpnI; RR-3 RV: 5′-GCGGGTACCTTATCTACAGTCTGGGCAGAACA-3′, KpnI; exon 1 FW: 5′-GCGCTCGAGTACCTGTGCCACCTCCG-3′, XhoI; exon 1 RV: 5′-GCGAAGCTTAGTTTCCGCAAGGAGGAC-3′, HindIII).
Article Title: PPARγ attenuates hypoxia-induced hypertrophic transcriptional pathways in the heart
Article Snippet: This NFAT-Luc construct was designed using nine copies of an NFAT binding site from the IL-4 promoter (5’-TGGAAAATT-3’) positioned 5’ to a minimal promoter from the alpha-myosin heavy chain gene (–164 to +16) and inserted upstream of the luciferase reporter in pGL-3 Basic (Promega Corporation, Madison, WI, USA) to create NFAT-luc.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5 -GCGACGCGTAGT GATTTGTAGAAAAGACCACATGA-3 , MluI; pGL3–1036 FW: 5 -GCGACGCGTGGGGTAACTTTACCATAACCTGG-3 , MluI; pGL3–306 FW: 5 -GCGACGCGTTCAGGAAGGTGTGTGGGAA-3 , MluI; pGL3– 306 RV: 5 -GCGGTCGACCTTGGCTTCTGCTCGCAG-3 , SalI; RR-I FW: 5 -GCGGGATCCTAAAGGGACAAGCTTGGGCT-3 , XhoI; RR-I RV: 5 - GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3 , BglII; RR-5 FW: 5 -GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3 , KpnI; RR-5 RV: 5 -GCGGGTACCCAAACTTCAAAAACATCATGCTA-3 , KpnI; RR-3 FW: 5 -GTCGACGTTCTTCTCGCAGAGCCTCA-3 , SalI; RR-3 RV: 5 -GTCGACAAGTCGGGGAAAGGGATTATT-3 , SalI; RR1/-3 FW: 5 -GCGGGTACCAGAAGTTTACCCAGCTCACCA-3 , KpnI; RR-1/-2 RV: 5 -GCGGGTACCACTCACTGTGGTAAGCATTCATT-3 , KpnI; RR-2 FW: 5 -GCGGGTACCCTGCCCAGACTGTAGATAAACG-3 , KpnI; RR-3 RV: 5 -GCGGGTACCTTATCTACAGTCTGGGCAGAACA3 , KpnI; exon 1 FW: 5 -GCGCTCGAGTACCTGTGCCACCTCCG-3 , XhoI; exon 1 RV: 5 -GCGAAGCTTAGTTTCCGCAAGGAGGAC-3 , HindIII).
Incubation:Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Overexpression of homeodomain-interacting protein kinase 2 (HIPK2) attenuates sepsis-mediated liver injury by restoring autophagy
Article Snippet: For further studies, primary hepatocytes were co-transfected with the internal control vector pmir-GLO (Promega) and pmir-GLO-HIPK2 3′-UTR using the Lipofectamine 2000 reagent (Thermo Fisher Scientific) for 20 h, followed by an incubation with the indicated chemicals for 10 h. Similarly, hepatocytes were co-transfected with the empty vector pGL-3 basic (Promega) and the pGL-3 vector containing the HIPK2 promoter using the Lipofectamine 2000 reagent for 20 h; the pRL vector was used as an internal control.
Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5′-GCGACGCGTAGTGATTTGTAGAAAAGACCACATGA-3′, MluI; pGL3–1036 FW: 5′-GCGACGCGTGGGGTAACTTTACCATAACCTGG-3′, MluI; pGL3–306 FW: 5′-GCGACGCGTTCAGGAAGGTGTGTGGGAA-3′, MluI; pGL3–306 RV: 5′-GCGGTCGACCTTGGCTTCTGCTCGCAG-3′, SalI; RR-I FW: 5′-GCGGGATCCTAAAGGGACAAGCTTGGGCT-3′, XhoI; RR-I RV: 5′-GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3′, BglII; RR-5′ FW: 5′-GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3′, KpnI; RR-5′ RV: 5′-GCGGGTACCCAAACTTCAAAAACATCATGCTA-3′, KpnI; RR-3′ FW: 5′-GTCGACGTTCTTCTCGCAGAGCCTCA-3′, SalI; RR-3′ RV: 5′-GTCGACAAGTCGGGGAAAGGGATTATT-3′, SalI; RR-1/-3 FW: 5′-GCGGGTACCAGAAGTTTACCCAGCTCACCA-3′, KpnI; RR-1/-2 RV: 5′-GCGGGTACCACTCACTGTGGTAAGCATTCATT-3′, KpnI; RR-2 FW: 5′-GCGGGTACCCTGCCCAGACTGTAGATAAACG-3′, KpnI; RR-3 RV: 5′-GCGGGTACCTTATCTACAGTCTGGGCAGAACA-3′, KpnI; exon 1 FW: 5′-GCGCTCGAGTACCTGTGCCACCTCCG-3′, XhoI; exon 1 RV: 5′-GCGAAGCTTAGTTTCCGCAAGGAGGAC-3′, HindIII).
Article Title: PPARγ attenuates hypoxia-induced hypertrophic transcriptional pathways in the heart
Article Snippet: This NFAT-Luc construct was designed using nine copies of an NFAT binding site from the IL-4 promoter (5’-TGGAAAATT-3’) positioned 5’ to a minimal promoter from the alpha-myosin heavy chain gene (–164 to +16) and inserted upstream of the luciferase reporter in pGL-3 Basic (Promega Corporation, Madison, WI, USA) to create NFAT-luc.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5 -GCGACGCGTAGT GATTTGTAGAAAAGACCACATGA-3 , MluI; pGL3–1036 FW: 5 -GCGACGCGTGGGGTAACTTTACCATAACCTGG-3 , MluI; pGL3–306 FW: 5 -GCGACGCGTTCAGGAAGGTGTGTGGGAA-3 , MluI; pGL3– 306 RV: 5 -GCGGTCGACCTTGGCTTCTGCTCGCAG-3 , SalI; RR-I FW: 5 -GCGGGATCCTAAAGGGACAAGCTTGGGCT-3 , XhoI; RR-I RV: 5 - GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3 , BglII; RR-5 FW: 5 -GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3 , KpnI; RR-5 RV: 5 -GCGGGTACCCAAACTTCAAAAACATCATGCTA-3 , KpnI; RR-3 FW: 5 -GTCGACGTTCTTCTCGCAGAGCCTCA-3 , SalI; RR-3 RV: 5 -GTCGACAAGTCGGGGAAAGGGATTATT-3 , SalI; RR1/-3 FW: 5 -GCGGGTACCAGAAGTTTACCCAGCTCACCA-3 , KpnI; RR-1/-2 RV: 5 -GCGGGTACCACTCACTGTGGTAAGCATTCATT-3 , KpnI; RR-2 FW: 5 -GCGGGTACCCTGCCCAGACTGTAGATAAACG-3 , KpnI; RR-3 RV: 5 -GCGGGTACCTTATCTACAGTCTGGGCAGAACA3 , KpnI; exon 1 FW: 5 -GCGCTCGAGTACCTGTGCCACCTCCG-3 , XhoI; exon 1 RV: 5 -GCGAAGCTTAGTTTCCGCAAGGAGGAC-3 , HindIII).
Construct:Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Overexpression of homeodomain-interacting protein kinase 2 (HIPK2) attenuates sepsis-mediated liver injury by restoring autophagy
Article Snippet: For further studies, primary hepatocytes were co-transfected with the internal control vector pmir-GLO (Promega) and pmir-GLO-HIPK2 3′-UTR using the Lipofectamine 2000 reagent (Thermo Fisher Scientific) for 20 h, followed by an incubation with the indicated chemicals for 10 h. Similarly, hepatocytes were co-transfected with the empty vector pGL-3 basic (Promega) and the pGL-3 vector containing the HIPK2 promoter using the Lipofectamine 2000 reagent for 20 h; the pRL vector was used as an internal control.
Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5′-GCGACGCGTAGTGATTTGTAGAAAAGACCACATGA-3′, MluI; pGL3–1036 FW: 5′-GCGACGCGTGGGGTAACTTTACCATAACCTGG-3′, MluI; pGL3–306 FW: 5′-GCGACGCGTTCAGGAAGGTGTGTGGGAA-3′, MluI; pGL3–306 RV: 5′-GCGGTCGACCTTGGCTTCTGCTCGCAG-3′, SalI; RR-I FW: 5′-GCGGGATCCTAAAGGGACAAGCTTGGGCT-3′, XhoI; RR-I RV: 5′-GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3′, BglII; RR-5′ FW: 5′-GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3′, KpnI; RR-5′ RV: 5′-GCGGGTACCCAAACTTCAAAAACATCATGCTA-3′, KpnI; RR-3′ FW: 5′-GTCGACGTTCTTCTCGCAGAGCCTCA-3′, SalI; RR-3′ RV: 5′-GTCGACAAGTCGGGGAAAGGGATTATT-3′, SalI; RR-1/-3 FW: 5′-GCGGGTACCAGAAGTTTACCCAGCTCACCA-3′, KpnI; RR-1/-2 RV: 5′-GCGGGTACCACTCACTGTGGTAAGCATTCATT-3′, KpnI; RR-2 FW: 5′-GCGGGTACCCTGCCCAGACTGTAGATAAACG-3′, KpnI; RR-3 RV: 5′-GCGGGTACCTTATCTACAGTCTGGGCAGAACA-3′, KpnI; exon 1 FW: 5′-GCGCTCGAGTACCTGTGCCACCTCCG-3′, XhoI; exon 1 RV: 5′-GCGAAGCTTAGTTTCCGCAAGGAGGAC-3′, HindIII).
Article Title: PPARγ attenuates hypoxia-induced hypertrophic transcriptional pathways in the heart
Article Snippet: This NFAT-Luc construct was designed using nine copies of an NFAT binding site from the IL-4 promoter (5’-TGGAAAATT-3’) positioned 5’ to a minimal promoter from the alpha-myosin heavy chain gene (–164 to +16) and inserted upstream of the luciferase reporter in pGL-3 Basic (Promega Corporation, Madison, WI, USA) to create NFAT-luc.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5 -GCGACGCGTAGT GATTTGTAGAAAAGACCACATGA-3 , MluI; pGL3–1036 FW: 5 -GCGACGCGTGGGGTAACTTTACCATAACCTGG-3 , MluI; pGL3–306 FW: 5 -GCGACGCGTTCAGGAAGGTGTGTGGGAA-3 , MluI; pGL3– 306 RV: 5 -GCGGTCGACCTTGGCTTCTGCTCGCAG-3 , SalI; RR-I FW: 5 -GCGGGATCCTAAAGGGACAAGCTTGGGCT-3 , XhoI; RR-I RV: 5 - GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3 , BglII; RR-5 FW: 5 -GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3 , KpnI; RR-5 RV: 5 -GCGGGTACCCAAACTTCAAAAACATCATGCTA-3 , KpnI; RR-3 FW: 5 -GTCGACGTTCTTCTCGCAGAGCCTCA-3 , SalI; RR-3 RV: 5 -GTCGACAAGTCGGGGAAAGGGATTATT-3 , SalI; RR1/-3 FW: 5 -GCGGGTACCAGAAGTTTACCCAGCTCACCA-3 , KpnI; RR-1/-2 RV: 5 -GCGGGTACCACTCACTGTGGTAAGCATTCATT-3 , KpnI; RR-2 FW: 5 -GCGGGTACCCTGCCCAGACTGTAGATAAACG-3 , KpnI; RR-3 RV: 5 -GCGGGTACCTTATCTACAGTCTGGGCAGAACA3 , KpnI; exon 1 FW: 5 -GCGCTCGAGTACCTGTGCCACCTCCG-3 , XhoI; exon 1 RV: 5 -GCGAAGCTTAGTTTCCGCAAGGAGGAC-3 , HindIII).
Binding Assay:Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Overexpression of homeodomain-interacting protein kinase 2 (HIPK2) attenuates sepsis-mediated liver injury by restoring autophagy
Article Snippet: For further studies, primary hepatocytes were co-transfected with the internal control vector pmir-GLO (Promega) and pmir-GLO-HIPK2 3′-UTR using the Lipofectamine 2000 reagent (Thermo Fisher Scientific) for 20 h, followed by an incubation with the indicated chemicals for 10 h. Similarly, hepatocytes were co-transfected with the empty vector pGL-3 basic (Promega) and the pGL-3 vector containing the HIPK2 promoter using the Lipofectamine 2000 reagent for 20 h; the pRL vector was used as an internal control.
Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5′-GCGACGCGTAGTGATTTGTAGAAAAGACCACATGA-3′, MluI; pGL3–1036 FW: 5′-GCGACGCGTGGGGTAACTTTACCATAACCTGG-3′, MluI; pGL3–306 FW: 5′-GCGACGCGTTCAGGAAGGTGTGTGGGAA-3′, MluI; pGL3–306 RV: 5′-GCGGTCGACCTTGGCTTCTGCTCGCAG-3′, SalI; RR-I FW: 5′-GCGGGATCCTAAAGGGACAAGCTTGGGCT-3′, XhoI; RR-I RV: 5′-GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3′, BglII; RR-5′ FW: 5′-GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3′, KpnI; RR-5′ RV: 5′-GCGGGTACCCAAACTTCAAAAACATCATGCTA-3′, KpnI; RR-3′ FW: 5′-GTCGACGTTCTTCTCGCAGAGCCTCA-3′, SalI; RR-3′ RV: 5′-GTCGACAAGTCGGGGAAAGGGATTATT-3′, SalI; RR-1/-3 FW: 5′-GCGGGTACCAGAAGTTTACCCAGCTCACCA-3′, KpnI; RR-1/-2 RV: 5′-GCGGGTACCACTCACTGTGGTAAGCATTCATT-3′, KpnI; RR-2 FW: 5′-GCGGGTACCCTGCCCAGACTGTAGATAAACG-3′, KpnI; RR-3 RV: 5′-GCGGGTACCTTATCTACAGTCTGGGCAGAACA-3′, KpnI; exon 1 FW: 5′-GCGCTCGAGTACCTGTGCCACCTCCG-3′, XhoI; exon 1 RV: 5′-GCGAAGCTTAGTTTCCGCAAGGAGGAC-3′, HindIII).
Article Title: PPARγ attenuates hypoxia-induced hypertrophic transcriptional pathways in the heart
Article Snippet: This NFAT-Luc construct was designed using nine copies of an NFAT binding site from the IL-4 promoter (5’-TGGAAAATT-3’) positioned 5’ to a minimal promoter from the alpha-myosin heavy chain gene (–164 to +16) and inserted upstream of the luciferase reporter in pGL-3 Basic (Promega Corporation, Madison, WI, USA) to create NFAT-luc.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5 -GCGACGCGTAGT GATTTGTAGAAAAGACCACATGA-3 , MluI; pGL3–1036 FW: 5 -GCGACGCGTGGGGTAACTTTACCATAACCTGG-3 , MluI; pGL3–306 FW: 5 -GCGACGCGTTCAGGAAGGTGTGTGGGAA-3 , MluI; pGL3– 306 RV: 5 -GCGGTCGACCTTGGCTTCTGCTCGCAG-3 , SalI; RR-I FW: 5 -GCGGGATCCTAAAGGGACAAGCTTGGGCT-3 , XhoI; RR-I RV: 5 - GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3 , BglII; RR-5 FW: 5 -GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3 , KpnI; RR-5 RV: 5 -GCGGGTACCCAAACTTCAAAAACATCATGCTA-3 , KpnI; RR-3 FW: 5 -GTCGACGTTCTTCTCGCAGAGCCTCA-3 , SalI; RR-3 RV: 5 -GTCGACAAGTCGGGGAAAGGGATTATT-3 , SalI; RR1/-3 FW: 5 -GCGGGTACCAGAAGTTTACCCAGCTCACCA-3 , KpnI; RR-1/-2 RV: 5 -GCGGGTACCACTCACTGTGGTAAGCATTCATT-3 , KpnI; RR-2 FW: 5 -GCGGGTACCCTGCCCAGACTGTAGATAAACG-3 , KpnI; RR-3 RV: 5 -GCGGGTACCTTATCTACAGTCTGGGCAGAACA3 , KpnI; exon 1 FW: 5 -GCGCTCGAGTACCTGTGCCACCTCCG-3 , XhoI; exon 1 RV: 5 -GCGAAGCTTAGTTTCCGCAAGGAGGAC-3 , HindIII).
Subcloning:Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Overexpression of homeodomain-interacting protein kinase 2 (HIPK2) attenuates sepsis-mediated liver injury by restoring autophagy
Article Snippet: For further studies, primary hepatocytes were co-transfected with the internal control vector pmir-GLO (Promega) and pmir-GLO-HIPK2 3′-UTR using the Lipofectamine 2000 reagent (Thermo Fisher Scientific) for 20 h, followed by an incubation with the indicated chemicals for 10 h. Similarly, hepatocytes were co-transfected with the empty vector pGL-3 basic (Promega) and the pGL-3 vector containing the HIPK2 promoter using the Lipofectamine 2000 reagent for 20 h; the pRL vector was used as an internal control.
Article Title: GATA2 Promotes Hematopoietic Development and Represses Cardiac Differentiation of Human Mesoderm
Article Snippet: PITX2 and ISL1 promoter regions were amplified by PCR from human genomic DNA and inserted into the KpnI and NheI sites of pGL-3 Basic (Promega, Madison, WI) to generate reporter plasmids.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5′-GCGACGCGTAGTGATTTGTAGAAAAGACCACATGA-3′, MluI; pGL3–1036 FW: 5′-GCGACGCGTGGGGTAACTTTACCATAACCTGG-3′, MluI; pGL3–306 FW: 5′-GCGACGCGTTCAGGAAGGTGTGTGGGAA-3′, MluI; pGL3–306 RV: 5′-GCGGTCGACCTTGGCTTCTGCTCGCAG-3′, SalI; RR-I FW: 5′-GCGGGATCCTAAAGGGACAAGCTTGGGCT-3′, XhoI; RR-I RV: 5′-GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3′, BglII; RR-5′ FW: 5′-GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3′, KpnI; RR-5′ RV: 5′-GCGGGTACCCAAACTTCAAAAACATCATGCTA-3′, KpnI; RR-3′ FW: 5′-GTCGACGTTCTTCTCGCAGAGCCTCA-3′, SalI; RR-3′ RV: 5′-GTCGACAAGTCGGGGAAAGGGATTATT-3′, SalI; RR-1/-3 FW: 5′-GCGGGTACCAGAAGTTTACCCAGCTCACCA-3′, KpnI; RR-1/-2 RV: 5′-GCGGGTACCACTCACTGTGGTAAGCATTCATT-3′, KpnI; RR-2 FW: 5′-GCGGGTACCCTGCCCAGACTGTAGATAAACG-3′, KpnI; RR-3 RV: 5′-GCGGGTACCTTATCTACAGTCTGGGCAGAACA-3′, KpnI; exon 1 FW: 5′-GCGCTCGAGTACCTGTGCCACCTCCG-3′, XhoI; exon 1 RV: 5′-GCGAAGCTTAGTTTCCGCAAGGAGGAC-3′, HindIII).
Article Title: PPARγ attenuates hypoxia-induced hypertrophic transcriptional pathways in the heart
Article Snippet: This NFAT-Luc construct was designed using nine copies of an NFAT binding site from the IL-4 promoter (5’-TGGAAAATT-3’) positioned 5’ to a minimal promoter from the alpha-myosin heavy chain gene (–164 to +16) and inserted upstream of the luciferase reporter in pGL-3 Basic (Promega Corporation, Madison, WI, USA) to create NFAT-luc.
Article Title: Identification of Synaptotagmin 10 as Effector of NPAS4-Mediated Protection from Excitotoxic Neurodegeneration
Article Snippet: The Syt10 promoter fragments were amplified by PCR from rat genomic DNA as template using primers with the corresponding restriction sites for subcloning into the luciferase reporter vector pGL-3 basic (Promega; pGL3–4713 FW: 5 -GCGACGCGTAGT GATTTGTAGAAAAGACCACATGA-3 , MluI; pGL3–1036 FW: 5 -GCGACGCGTGGGGTAACTTTACCATAACCTGG-3 , MluI; pGL3–306 FW: 5 -GCGACGCGTTCAGGAAGGTGTGTGGGAA-3 , MluI; pGL3– 306 RV: 5 -GCGGTCGACCTTGGCTTCTGCTCGCAG-3 , SalI; RR-I FW: 5 -GCGGGATCCTAAAGGGACAAGCTTGGGCT-3 , XhoI; RR-I RV: 5 - GCGGGTCGACAAAATTCTTGATAAATACTTGCTGAA 3 , BglII; RR-5 FW: 5 -GCGGGTACCTCTTCAGGCTCAAAATTAGTGG-3 , KpnI; RR-5 RV: 5 -GCGGGTACCCAAACTTCAAAAACATCATGCTA-3 , KpnI; RR-3 FW: 5 -GTCGACGTTCTTCTCGCAGAGCCTCA-3 , SalI; RR-3 RV: 5 -GTCGACAAGTCGGGGAAAGGGATTATT-3 , SalI; RR1/-3 FW: 5 -GCGGGTACCAGAAGTTTACCCAGCTCACCA-3 , KpnI; RR-1/-2 RV: 5 -GCGGGTACCACTCACTGTGGTAAGCATTCATT-3 , KpnI; RR-2 FW: 5 -GCGGGTACCCTGCCCAGACTGTAGATAAACG-3 , KpnI; RR-3 RV: 5 -GCGGGTACCTTATCTACAGTCTGGGCAGAACA3 , KpnI; exon 1 FW: 5 -GCGCTCGAGTACCTGTGCCACCTCCG-3 , XhoI; exon 1 RV: 5 -GCGAAGCTTAGTTTCCGCAAGGAGGAC-3 , HindIII).
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