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block-diagram representations of numerous signaling pathways  (BioCarta)

 
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    BioCarta block-diagram representations of numerous signaling pathways
    Block Diagram Representations Of Numerous Signaling Pathways, supplied by BioCarta, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pathway+diagrams/block+diagram+representations+of+numerous+signaling+pathways/10__30954_slash_2319___5169__1__2022__1-242-5-0
    Average 90 stars, based on 1 article reviews
    block-diagram representations of numerous signaling pathways - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    other:

    Article Title: What's that gene (or protein)? Online resources for exploring functions of genes, transcripts, and proteins
    Article Snippet: Here the presence of one or more gene products from the input list within various pathways (from resources including BioCarta, KEGG, and Reactome) is indicated, and pathway diagrams can be displayed with the relevant proteins highlighted and flashing.

    Article Title: SMPDB: The Small Molecule Pathway Database
    Article Snippet: Some pathway resources such as KEGG and Reactome use pathway diagrams that are very generic and highly schematic or simplified, while still others use diagrams that very specific and rich in detail, color and content (BioCarta, ProteinLounge, Ambion).

    Article Title: The sting in WASP's tail
    Article Snippet: The Biocarta website contains several types of information, but its pathway diagrams, which cover all areas of cellular regulation from cell division to apoptosis, immunology to neuroscience, are the main attraction.

    Selection:

    Article Title: CellML metadata standards, associated tools and repositories
    Article Snippet: .. To aid understanding of the context of biological entities and reactions, links to publicly available pathway diagrams such as those provided by KEGG pathway ( www.genome.jp/kegg/pathway.html ) or BioCarta ( www.biocarta.com ) would also aid model component selection by helping the model builder decide what other biological processes and entities may be apposite to the aggregated model. ..



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    <t>KEGG</t> <t>pathway</t> enrichment analysis of DEGs. (A) Pathways enriched among down-regulated DEGs. The antigen processing and presentation pathway is highlighted. (B) The single pathway enriched among up-regulated DEGs. (C) Diagram of the KEGG “antigen processing and presentation” pathway. Red stars indicate genes that are down-regulated in microglia grown on SPI-collagen. Note that the number of stars is not equal to the number of DEGs because some boxes (e.g. MHCII) represent multiple genes and others such as Ii, SLIP and CLIP are proteolytic products of a single protein. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)
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    Image Search Results


    Enriched Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway diagrams of downregulated differentially expressed genes between semen- and sham-inseminated birds at late lay. KEGG pathway diagrams illustrate downregulation of genes in the ribosome (A) ribosome biogenesis (B) , proteasome (C) pathways in the semen group at late lay. Fold-change (log2) cutoff in color code: bright red indicates most upregulated, bright green, most downregulated.

    Journal: Frontiers in Physiology

    Article Title: Prolonged repeated inseminations trigger a local immune response and accelerate aging of the uterovaginal junction in turkey hens

    doi: 10.3389/fphys.2023.1275922

    Figure Lengend Snippet: Enriched Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway diagrams of downregulated differentially expressed genes between semen- and sham-inseminated birds at late lay. KEGG pathway diagrams illustrate downregulation of genes in the ribosome (A) ribosome biogenesis (B) , proteasome (C) pathways in the semen group at late lay. Fold-change (log2) cutoff in color code: bright red indicates most upregulated, bright green, most downregulated.

    Article Snippet: KEGG pathway diagrams ( ) were used to visualize gene expression data using Pathview ( ).

    Techniques:

    Enriched Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways of upregulated differentially expressed genes between semen- and sham-inseminated birds at late lay. KEGG pathway diagrams illustrate upregulation of genes in the C-type lectin receptor signaling (A) and extracellular matrix (ECM)-receptor interaction (B) pathways in the semen group at late lay. Fold-change (log2) cutoff in color code: bright red indicates most upregulated, bright green, most downregulated.

    Journal: Frontiers in Physiology

    Article Title: Prolonged repeated inseminations trigger a local immune response and accelerate aging of the uterovaginal junction in turkey hens

    doi: 10.3389/fphys.2023.1275922

    Figure Lengend Snippet: Enriched Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways of upregulated differentially expressed genes between semen- and sham-inseminated birds at late lay. KEGG pathway diagrams illustrate upregulation of genes in the C-type lectin receptor signaling (A) and extracellular matrix (ECM)-receptor interaction (B) pathways in the semen group at late lay. Fold-change (log2) cutoff in color code: bright red indicates most upregulated, bright green, most downregulated.

    Article Snippet: KEGG pathway diagrams ( ) were used to visualize gene expression data using Pathview ( ).

    Techniques:

    KEGG pathway enrichment analysis of DEGs. (A) Pathways enriched among down-regulated DEGs. The antigen processing and presentation pathway is highlighted. (B) The single pathway enriched among up-regulated DEGs. (C) Diagram of the KEGG “antigen processing and presentation” pathway. Red stars indicate genes that are down-regulated in microglia grown on SPI-collagen. Note that the number of stars is not equal to the number of DEGs because some boxes (e.g. MHCII) represent multiple genes and others such as Ii, SLIP and CLIP are proteolytic products of a single protein. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)

    Journal: Heliyon

    Article Title: Transcriptomic analysis reveals the immune response of human microglia to a soy protein and collagen hybrid bioscaffold

    doi: 10.1016/j.heliyon.2023.e13352

    Figure Lengend Snippet: KEGG pathway enrichment analysis of DEGs. (A) Pathways enriched among down-regulated DEGs. The antigen processing and presentation pathway is highlighted. (B) The single pathway enriched among up-regulated DEGs. (C) Diagram of the KEGG “antigen processing and presentation” pathway. Red stars indicate genes that are down-regulated in microglia grown on SPI-collagen. Note that the number of stars is not equal to the number of DEGs because some boxes (e.g. MHCII) represent multiple genes and others such as Ii, SLIP and CLIP are proteolytic products of a single protein. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)

    Article Snippet: The annotated KEGG pathway diagram was produced using Pathview [ ].

    Techniques: