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Arraystar inc mouse lncrna microarray v3.0
Main features of studies with omics application in rodent ischemia and reperfusion injury model
Mouse Lncrna Microarray V3.0, supplied by Arraystar inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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1) Product Images from "Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models"

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models

Journal: International Journal of Biological Sciences

doi: 10.7150/ijbs.109449

Main features of studies with omics application in rodent ischemia and reperfusion injury model
Figure Legend Snippet: Main features of studies with omics application in rodent ischemia and reperfusion injury model

Techniques Used: Control, Sampling, Comparison, Biomarker Discovery, Microarray, Ubiquitin Proteomics, Functional Assay, Expressing, Protein-Protein interactions, Gene Expression, Migration, Activation Assay, TUNEL Assay, Infection, Construct, Sequencing

Related Articles

Microarray:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

T-Test:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Quantitative RT-PCR:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Control:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Sampling:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Comparison:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Biomarker Discovery:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Ubiquitin Proteomics:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Functional Assay:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Expressing:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Protein-Protein interactions:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Gene Expression:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Migration:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Activation Assay:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

TUNEL Assay:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Infection:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Construct:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Sequencing:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Hybridization:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Amplification:

Article Title: Differential Expression of Long Noncoding RNAs in Murine Myoblasts After Short Hairpin RNA-Mediated Dysferlin Silencing In Vitro: Microarray Profiling.
Article Snippet: LncRNA and mRNA expression profiling were performed using Arraystar Mouse LncRNA Microarray V3.0 containing 21,486 lncRNA and 18,921 mRNA probes.

Article Title: Integrative analysis of the roles of lncRNAs and mRNAs in ischaemic preconditioning to alleviate liver ischaemia-reperfusion injury in mice.
Article Snippet: The objective of our study was to elucidate the possible underlying mechanism for the protective effect of ischaemic preconditioning (IPC) against ischaemia-reperfusion (I/R) injury and to provide new research perspectives of long non-coding RNAs (lncRNAs).. In this study, serum and liver tissue samples were collected to measure indexes of liver injury from a mouse liver model in sham, I/R injury and I/R þ IPC groups.. Furthermore, liver samples from 5 randomly selected mice per group were extracted and subjected to the microarray and subsequent bioinformatics analysis.

Article Title: Remifentanil represses oxidative stress to relieve hepatic ischemia/reperfusion injury via regulating BACH1/PRDX1 axis.
Article Snippet: Background: Hepatic ischemia-reperfusion injury (HIRI) is a major cause of liver dysfunction after clinical liver surgery, which seriously affects the prognosis of patients.. Remifentanil (RE) has been verified to attenuate HIRI.. However, its therapeutic mechanism is still unclear.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: An Arraystar mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD) was used in our study, which could detect about 35,923 lncRNAs and 24,881 coding transcripts.

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models
Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains
Article Snippet: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).

Article Title: MiR-150 blunts cardiac dysfunction in mice with cardiomyocyte loss of β 1 -adrenergic receptor/β-arrestin signaling and controls a unique transcriptome
Article Snippet: 144 The DNA microarray experiments were then performed using the Mouse Circular RNA Microarray 145 v2.0 (8 x 15K, Arraystar Inc) designed for the global profiling of 14,236 circular RNAs (circRNAs), 146 as well as the Mouse LncRNA Microarray v3.0 (8 x 60K, Arraystar Inc) designed for the global 147 profiling of 35,923 long noncoding RNAs (lncRNAs) and 24,881 protein-coding transcripts as 148 previously described [7-11].

Article Title: Gene expression profile for different susceptibilities to sound stimulation: a comparative study on brainstems between two inbred laboratory mouse strains.
Article Snippet: Methods: We compared lncRNAs and mRNAs from the brainstem of the two strains with Arraystar Mouse lncRNA Microarray V3.0 (Arraystar, Rockville, MD).



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Main features of studies with omics application in rodent ischemia and reperfusion injury model

Journal: International Journal of Biological Sciences

Article Title: Molecular Mechanisms of Ischemia/Reperfusion Injury and Graft Dysfunction in Liver Transplantation: Insights from Multi-Omics Studies in Rodent Animal Models

doi: 10.7150/ijbs.109449

Figure Lengend Snippet: Main features of studies with omics application in rodent ischemia and reperfusion injury model

Article Snippet: Hua, China, 2022 , C57BL6 mice/ male/ 8-10 wks/ 6 vs. 6 , 70% WI (left+middle lobe) , IPC/none , Liver/at the end of each treatment , MicroArray/Arraystar Mouse LncRNA Microarray V3.0 , mRNA/ lncRNA/ transcriptomics , 1.IPC+I/R vs. I/R , One-way ANOVA using Dunnett t-test , 167 DE lncRNAs and 108 mRNAs were identified in IPC+I/R groups. KEGG analysis indicated DEGs were enriched in protein processing in the endoplasmic reticulum, antigen processing and presentation, and fructose and mannose metabolism. , Tissue qRT-PCR , GSE192977.

Techniques: Control, Sampling, Comparison, Biomarker Discovery, Microarray, Ubiquitin Proteomics, Functional Assay, Expressing, Protein-Protein interactions, Gene Expression, Migration, Activation Assay, TUNEL Assay, Infection, Construct, Sequencing