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microarrays-based mirna expression analysis  (Agilent technologies)


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    Agilent technologies microarrays-based mirna expression analysis
    Microarrays Based Mirna Expression Analysis, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mirnas+expression+microarray+assay/pmc10470261-70-11-10
    Average 90 stars, based on 1 article reviews
    microarrays-based mirna expression analysis - by Bioz Stars, 2026-11
    90/100 stars

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    Related Articles

    RNA Extraction:

    Article Title: Exosome-mediated miR-144-3p promotes ferroptosis to inhibit osteosarcoma proliferation, migration, and invasion through regulating ZEB1.
    Article Snippet: .. We then extracted total RNA extraction and performed RNA sequencing through Agilent miRNA expression profiling microarray (Agilent Technology, Inc., Palo Alto, USA). .. The raw data was collected using Agilent Feature Extraction software.

    Article Title: Exosome-mediated miR-144-3p promotes ferroptosis to inhibit osteosarcoma proliferation, migration, and invasion through regulating ZEB1
    Article Snippet: .. We then extracted total RNA extraction and performed RNA sequencing through Agilent miRNA expression profiling microarray (Agilent Technology, Inc., Palo Alto, USA). .. The raw data was collected using Agilent Feature Extraction software.

    RNA Sequencing:

    Article Title: Exosome-mediated miR-144-3p promotes ferroptosis to inhibit osteosarcoma proliferation, migration, and invasion through regulating ZEB1.
    Article Snippet: .. We then extracted total RNA extraction and performed RNA sequencing through Agilent miRNA expression profiling microarray (Agilent Technology, Inc., Palo Alto, USA). .. The raw data was collected using Agilent Feature Extraction software.

    Article Title: Exosome-mediated miR-144-3p promotes ferroptosis to inhibit osteosarcoma proliferation, migration, and invasion through regulating ZEB1
    Article Snippet: .. We then extracted total RNA extraction and performed RNA sequencing through Agilent miRNA expression profiling microarray (Agilent Technology, Inc., Palo Alto, USA). .. The raw data was collected using Agilent Feature Extraction software.

    Expressing:

    Article Title: Exosome-mediated miR-144-3p promotes ferroptosis to inhibit osteosarcoma proliferation, migration, and invasion through regulating ZEB1.
    Article Snippet: .. We then extracted total RNA extraction and performed RNA sequencing through Agilent miRNA expression profiling microarray (Agilent Technology, Inc., Palo Alto, USA). .. The raw data was collected using Agilent Feature Extraction software.

    Article Title: Identification of a 4-microRNA Signature for Clear Cell Renal Cell Carcinoma Metastasis and Prognosis
    Article Snippet: .. Microarray testing of miRNA expression was performed at the COH Microarray Core using the Agilent human miRNA microarray V2 (Agilent Technologies, Inc., Santa Clara CA), which contains probes for 723 human miRNAs from Sanger miRBase 10.1, as described previously. ..

    Article Title: Genomewide expression profiling identifies a novel miRNA-based signature for the detection of peritoneal metastasis in patients with gastric cancer
    Article Snippet: .. Custom miRNA microarray expression profiling was performed using the Agilent SurePrint G3 Human miRNA microarray 8X60K v3 (Agilent Technologies, Santa Clara, CA), in primary tumor tissue specimens from GC patients with PM (n = 6) and without PM (n = 6). ..

    Article Title: Exosome-mediated miR-144-3p promotes ferroptosis to inhibit osteosarcoma proliferation, migration, and invasion through regulating ZEB1
    Article Snippet: .. We then extracted total RNA extraction and performed RNA sequencing through Agilent miRNA expression profiling microarray (Agilent Technology, Inc., Palo Alto, USA). .. The raw data was collected using Agilent Feature Extraction software.

    Microarray:

    Article Title: Exosome-mediated miR-144-3p promotes ferroptosis to inhibit osteosarcoma proliferation, migration, and invasion through regulating ZEB1.
    Article Snippet: .. We then extracted total RNA extraction and performed RNA sequencing through Agilent miRNA expression profiling microarray (Agilent Technology, Inc., Palo Alto, USA). .. The raw data was collected using Agilent Feature Extraction software.

    Article Title: Identification of a 4-microRNA Signature for Clear Cell Renal Cell Carcinoma Metastasis and Prognosis
    Article Snippet: .. Microarray testing of miRNA expression was performed at the COH Microarray Core using the Agilent human miRNA microarray V2 (Agilent Technologies, Inc., Santa Clara CA), which contains probes for 723 human miRNAs from Sanger miRBase 10.1, as described previously. ..

    Article Title: KDM5C Expedites Lung Cancer Growth and Metastasis Through Epigenetic Regulation of MicroRNA-133a
    Article Snippet: Oebiotech (Shanghai, China) was commissioned to perform miRNA microarray assays. .. Labeled RNA samples were competitively hybridized to miRNA microarray (Agilent Human miRNA microarray, Design ID: 070156). .. After being washed, the microarray was scanned with an Agilent scanner G2505C (Agilent Technologies).

    Article Title: Genomewide expression profiling identifies a novel miRNA-based signature for the detection of peritoneal metastasis in patients with gastric cancer
    Article Snippet: .. Custom miRNA microarray expression profiling was performed using the Agilent SurePrint G3 Human miRNA microarray 8X60K v3 (Agilent Technologies, Santa Clara, CA), in primary tumor tissue specimens from GC patients with PM (n = 6) and without PM (n = 6). ..

    Article Title: Exosome-mediated miR-144-3p promotes ferroptosis to inhibit osteosarcoma proliferation, migration, and invasion through regulating ZEB1
    Article Snippet: .. We then extracted total RNA extraction and performed RNA sequencing through Agilent miRNA expression profiling microarray (Agilent Technology, Inc., Palo Alto, USA). .. The raw data was collected using Agilent Feature Extraction software.

    other:

    Article Title: Nuclear microRNAs release paused Pol II via the DDX21-CDK9 complex.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER DDX21-knockout H1299, re-expressed DDX21 clone This study N/A Oligonucleotides DNA oligonucleotides (see Table S5) This study N/A siRNAs and mimic miRNAs (see Table S6) This study N/A Recombinant DNA ZMYND10 shRNA vector Sigma-Aldrich TRCN0000234450 DDX21 shRNA vector #1 Sigma-Aldrich TRCN0000051200 DDX21 shRNA vector #2 Sigma-Aldrich TRCN0000051201 GFP-p53 (Boyd et al., 2000) Addgene #12091 pEGFP-N1 Clontech 6085-1 psPAX2 N/A Addgene #12260 pMD2.G N/A Addgene #12259 pSpCas9-2A-Puro (PX459) v2.0 (Ran et al., 2013) Addgene #62988, RRID:Addgene_62988 pIRESneo-FLAG/HA Ago1 (Meister et al., 2004) Addgene #10820, RRID:Addgene_10820 pIRESneo-FLAG/HA Ago2 corrected (Meister et al., 2004) Addgene #10822, RRID:Addgene_10822 pIRESneo-FLAG/HA Ago3 (Meister et al., 2004) Addgene #10823, RRID:Addgene_10823 pIRESneo-FLAG/HA Ago4 (Meister et al., 2004) Addgene #10824, RRID:Addgene_10824 pMD20 TAKARA Bio 3270 pLVSIN CMV puro-DDX21 This study N/A Software and algorithms CHOPCHOP (Labun et al., 2019) https://chopchop.cbu.uib.no FANTOM 5 database RIKEN http://fantom.gsc.riken.jp/5/ UCSC Genome Browser UCSC https://genome.ucsc.edu/index.html miRWalk 2.0 (Ding et al., 2016) http://mirwalk.umm.uni-heidelberg.de ImageJ 1.43u (Schneider et al., 2012) https://imagej.nih.gov/ij/ GraphPad Prism version 9 GraphPad Software https://www.graphpad.com ZEN2.3 Zeiss, Göttingen, Germany https://www.zeiss.com/microscopy/int/ products/microscope-software/zen.html

    Article Title: Acute Exercise Leads to Regulation of Telomere-Associated Genes and MicroRNA Expression in Immune Cells
    Article Snippet: All data were processed using FlowJo flow cytometry analysis software (Tree Star).

    Article Title: SHOC2 scaffold protein modulates daunorubicin-induced cell death through p53 modulation in lymphoid leukemia cells
    Article Snippet: MicroRNA library was obtained from total RNA (100ηg) and the expression profile was performed using the Agilent “Human micro-RNA Microarray Kit (v3)” (G4470C, Agilent Technologies, Santa Clara, CA, USA) as previously reported .

    Labeling:

    Article Title: KDM5C Expedites Lung Cancer Growth and Metastasis Through Epigenetic Regulation of MicroRNA-133a
    Article Snippet: Oebiotech (Shanghai, China) was commissioned to perform miRNA microarray assays. .. Labeled RNA samples were competitively hybridized to miRNA microarray (Agilent Human miRNA microarray, Design ID: 070156). .. After being washed, the microarray was scanned with an Agilent scanner G2505C (Agilent Technologies).



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    Biotechnology Information circrna, mirna mrna microarray expression profile datasets
    Study design <t>flowchart.</t> <t>circRNA,</t> circular RNA; <t>miRNA,</t> microRNA; RIF, recurrent implantation failure. DEcircRNAs, differentially expressed circRNAs; DEmiRNAs, differentially expressed miRNAs; DEmRNAs, differentially expressed mRNAs
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    Agilent technologies microarrays-based mirna expression analysis
    Study design <t>flowchart.</t> <t>circRNA,</t> circular RNA; <t>miRNA,</t> microRNA; RIF, recurrent implantation failure. DEcircRNAs, differentially expressed circRNAs; DEmiRNAs, differentially expressed miRNAs; DEmRNAs, differentially expressed mRNAs
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    Image Search Results


    Study design flowchart. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure. DEcircRNAs, differentially expressed circRNAs; DEmiRNAs, differentially expressed miRNAs; DEmRNAs, differentially expressed mRNAs

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Study design flowchart. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure. DEcircRNAs, differentially expressed circRNAs; DEmiRNAs, differentially expressed miRNAs; DEmRNAs, differentially expressed mRNAs

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of mRNAs for GSE103465. (A) Boxplot of GSE103465. (B) Volcano plots of DEmRNAs based on GSE103465. (C) Venn diagram of mRNAs for GeneCards and GSE103465, where the intersection section is predicted DEmRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of mRNAs for GSE103465. (A) Boxplot of GSE103465. (B) Volcano plots of DEmRNAs based on GSE103465. (C) Venn diagram of mRNAs for GeneCards and GSE103465, where the intersection section is predicted DEmRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of miRNAs for GSE121219. (A) Boxplot of GSE121219. (B) Volcano plots of DEmiRNAs based on GSE121219. (C) Venn diagram of miRNAs for miRDIP and GSE121219, where the intersection section is predicted DEmiRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of miRNAs for GSE121219. (A) Boxplot of GSE121219. (B) Volcano plots of DEmiRNAs based on GSE121219. (C) Venn diagram of miRNAs for miRDIP and GSE121219, where the intersection section is predicted DEmiRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of circRNAs for GSE147442. (A) Boxplot of GSE147442 after standardization. (B) Volcano plots of DEcircRNAs based on GSE147442. (C) Venn diagram of miRNAs for starBase 2.0 and GSE147442, where the intersection section is predicted DEcircRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of circRNAs for GSE147442. (A) Boxplot of GSE147442 after standardization. (B) Volcano plots of DEcircRNAs based on GSE147442. (C) Venn diagram of miRNAs for starBase 2.0 and GSE147442, where the intersection section is predicted DEcircRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Figure 5 CircRNA-miRNA-mRNA regulatory network, which consists of 8 DEcircRNAs, 10 DEmiRNAs and 45 DERNAs. DEcircRNA, differentially expressed circular RNA; DEmiRNA, differentially expressed micro RNA; DERNA, differentially expressed RNA. Arrow-shape nodes: circRNAs, triangle nodes: miRNAs, ellipse-shaped nodes: mRNAs

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Figure 5 CircRNA-miRNA-mRNA regulatory network, which consists of 8 DEcircRNAs, 10 DEmiRNAs and 45 DERNAs. DEcircRNA, differentially expressed circular RNA; DEmiRNA, differentially expressed micro RNA; DERNA, differentially expressed RNA. Arrow-shape nodes: circRNAs, triangle nodes: miRNAs, ellipse-shaped nodes: mRNAs

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    A PPI network and circRNA–miRNA–hub gene regulatory subnetwork. (A) A PPI network of the fifty-five target genes associated with angiogenesis in RIF. (B) Six hub genes extracted by cytoHubba plug-in. (C) CircRNA–miRNA–hub gene regulatory subnetwork, consisting of 3 circRNAs, 3 miRNAs, and 3 mRNAs. PPI, protein–protein interaction; circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: A PPI network and circRNA–miRNA–hub gene regulatory subnetwork. (A) A PPI network of the fifty-five target genes associated with angiogenesis in RIF. (B) Six hub genes extracted by cytoHubba plug-in. (C) CircRNA–miRNA–hub gene regulatory subnetwork, consisting of 3 circRNAs, 3 miRNAs, and 3 mRNAs. PPI, protein–protein interaction; circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques: