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Biotechnology Information microarray gene expression datasets
Microarray Gene Expression Datasets, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/microarray+gene+expression+datasets/data+microarray/pm41839687-38-1-25
Average 86 stars, based on 1 article reviews
microarray gene expression datasets - by Bioz Stars, 2026-09
86/100 stars

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Microarray:

Article Title: Mast-cell derived nerve growth factor drives ILC2 pro-tumoral functions in bladder cancer.
Article Snippet: .. Microarray gene expression datasets are available from the National Center for Biotechnology Information (NCBI)'s GEO database under accession numbers GSE31684 [https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE31684] and GSE48075 [https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE48075]. ..

Article Title: Genetic underpinnings of type-2 diabetes (T2D) with colorectal cancer (CRC): In-silico discovery of common molecular signatures, pathogenetic processes and therapeutic candidates
Article Snippet: .. Two microarray gene expression datasets for each of T2D and CRC were downloaded from the Gene Expression Omnibus (GEO) repository of the National Center for Biotechnology Information (NCBI). ..

Article Title: Genetic underpinnings of type-2 diabetes (T2D) with colorectal cancer (CRC): In-silico discovery of common molecular signatures, pathogenetic processes and therapeutic candidates.
Article Snippet: .. Two microarray gene expression datasets for each of T2D and CRC were downloaded from the Gene Expression Omnibus (GEO) repository of the National Center for Biotechnology Information (NCBI). ..

Article Title: Breast cancer prediction and categorization in the molecular era of histologic grade
Article Snippet: Breast cancer is the second utmost common cancer among women.. In this research study, two feature selectionmethods, namely Consistency first Search-Best First search (CFS-BFS) and Consistency-Best First Search (Consistency-BFS) are used to find out the significant biomarkers for breast cancer.. The feature selection methods pick a small count of important and relevant genes providing a higher degree of accuracy.

Article Title: Metabolism and response to stress gene signatures reveal ulcerative colitis heterogeneity and identify patients with increased response to therapy
Article Snippet: .. Publicly available microarray gene expression datasets used to predict response to ustekinumab ( GSE206285 ) and anti-TNF therapies ( GSE16879 , GSE23597 , GSE73661 , and GSE92415 ) were obtained from the National Center for Biotechnology Information Gene Expression Omnibus (GEO) data repository. ..


Article Title: Endometriosis-Associated Ovarian Cancer: What Are the Implications for Women with Intact Endometrioma Planning for a Future Pregnancy? A Reproductive Clinical Outlook
Article Snippet: .. This was achieved by studying the microarray gene expression datasets of these three illnesses, from the National Center for Biotechnology Information Gene Expression Omnibus, with the quantified molecular functions defined by 1454 Gene Ontology term gene sets. ..

Article Title: Metabolism and response to stress gene signatures reveal ulcerative colitis heterogeneity and identify patients with increased response to therapy
Article Snippet: .. Publicly available microarray gene expression datasets that were used to predict response to ustekinumab ( GSE206285 ) and anti-TNF therapies ( GSE16879 , GSE23597 , GSE73661 , and GSE92415 ) were obtained from the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) data repository: https://www.ncbi.nlm.nih.gov/geo/ . .. The andecaliximab (GS-5745) dataset was provided by Gilead Sciences, Inc. by permission, and will be shared on request to the corresponding author with permission of Gilead Sciences, Inc.

Gene Expression:

Article Title: Mast-cell derived nerve growth factor drives ILC2 pro-tumoral functions in bladder cancer.
Article Snippet: .. Microarray gene expression datasets are available from the National Center for Biotechnology Information (NCBI)'s GEO database under accession numbers GSE31684 [https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE31684] and GSE48075 [https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE48075]. ..

Article Title: Genetic underpinnings of type-2 diabetes (T2D) with colorectal cancer (CRC): In-silico discovery of common molecular signatures, pathogenetic processes and therapeutic candidates
Article Snippet: .. Two microarray gene expression datasets for each of T2D and CRC were downloaded from the Gene Expression Omnibus (GEO) repository of the National Center for Biotechnology Information (NCBI). ..

Article Title: Genetic underpinnings of type-2 diabetes (T2D) with colorectal cancer (CRC): In-silico discovery of common molecular signatures, pathogenetic processes and therapeutic candidates.
Article Snippet: .. Two microarray gene expression datasets for each of T2D and CRC were downloaded from the Gene Expression Omnibus (GEO) repository of the National Center for Biotechnology Information (NCBI). ..

Article Title: Breast cancer prediction and categorization in the molecular era of histologic grade
Article Snippet: Breast cancer is the second utmost common cancer among women.. In this research study, two feature selectionmethods, namely Consistency first Search-Best First search (CFS-BFS) and Consistency-Best First Search (Consistency-BFS) are used to find out the significant biomarkers for breast cancer.. The feature selection methods pick a small count of important and relevant genes providing a higher degree of accuracy.

Article Title: Metabolism and response to stress gene signatures reveal ulcerative colitis heterogeneity and identify patients with increased response to therapy
Article Snippet: .. Publicly available microarray gene expression datasets used to predict response to ustekinumab ( GSE206285 ) and anti-TNF therapies ( GSE16879 , GSE23597 , GSE73661 , and GSE92415 ) were obtained from the National Center for Biotechnology Information Gene Expression Omnibus (GEO) data repository. ..


Article Title: Endometriosis-Associated Ovarian Cancer: What Are the Implications for Women with Intact Endometrioma Planning for a Future Pregnancy? A Reproductive Clinical Outlook
Article Snippet: .. This was achieved by studying the microarray gene expression datasets of these three illnesses, from the National Center for Biotechnology Information Gene Expression Omnibus, with the quantified molecular functions defined by 1454 Gene Ontology term gene sets. ..

Article Title: Metabolism and response to stress gene signatures reveal ulcerative colitis heterogeneity and identify patients with increased response to therapy
Article Snippet: .. Publicly available microarray gene expression datasets that were used to predict response to ustekinumab ( GSE206285 ) and anti-TNF therapies ( GSE16879 , GSE23597 , GSE73661 , and GSE92415 ) were obtained from the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) data repository: https://www.ncbi.nlm.nih.gov/geo/ . .. The andecaliximab (GS-5745) dataset was provided by Gilead Sciences, Inc. by permission, and will be shared on request to the corresponding author with permission of Gilead Sciences, Inc.

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Flowchart of the study design. Genomic and transcriptomic data were extracted from the GEO database ( <t>GSE83448</t> ).
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Flowchart of the study design. Genomic and transcriptomic data were extracted from the GEO database ( GSE83448 ).

Journal: Biomolecules and Biomedicine

Article Title: S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation

doi: 10.17305/bb.2025.13221

Figure Lengend Snippet: Flowchart of the study design. Genomic and transcriptomic data were extracted from the GEO database ( GSE83448 ).

Article Snippet: The gene expression microarray dataset GSE83448 was obtained from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI GEO; https://www.ncbi.nlm.nih.gov/geo/ ) [ ].

Techniques:

Differentially expressed S-palmitoylation-related genes in 39 CD intestinal biopsies and 14 healthy controls. (A) PCA for GSE83448 . (B) Volcano plot illustrating 3743 DEGs. (C) Venn diagram depicting the overlap between DEGs and S-palmitoylation-related genes. (D) Heatmap representing the 23 SP-DEGs in CD and healthy controls. (E) Boxplots comparing the 23 SP-DEGs in CD and healthy controls. Abbreviations: CD: Crohn’s disease; PCA: Principal component analysis; DEGs: Differentially expressed genes; SP-DEGs: S-palmitoylation-related differentially expressed genes.

Journal: Biomolecules and Biomedicine

Article Title: S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation

doi: 10.17305/bb.2025.13221

Figure Lengend Snippet: Differentially expressed S-palmitoylation-related genes in 39 CD intestinal biopsies and 14 healthy controls. (A) PCA for GSE83448 . (B) Volcano plot illustrating 3743 DEGs. (C) Venn diagram depicting the overlap between DEGs and S-palmitoylation-related genes. (D) Heatmap representing the 23 SP-DEGs in CD and healthy controls. (E) Boxplots comparing the 23 SP-DEGs in CD and healthy controls. Abbreviations: CD: Crohn’s disease; PCA: Principal component analysis; DEGs: Differentially expressed genes; SP-DEGs: S-palmitoylation-related differentially expressed genes.

Article Snippet: The gene expression microarray dataset GSE83448 was obtained from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI GEO; https://www.ncbi.nlm.nih.gov/geo/ ) [ ].

Techniques:

Functional enrichment analysis of SP-DEGs in the GSE83448 dataset. (A) The bubble plot illustrates key enriched terms across various categories. BP denotes biological processes; CC indicates cellular components; and MF represents molecular functions. (B) The circle map emphasizes BPs associated with S-palmitoylation. (C) The bar plot presents the results of the functional enrichment analysis, ranked by statistical significance. (D) The Circos plot visualizes the functional associations across categories. Abbreviations: SP-DEGs: S-palmitoylation-related differentially expressed genes; BP: Biological process; CC: Cellular component; MF: Molecular function.

Journal: Biomolecules and Biomedicine

Article Title: S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation

doi: 10.17305/bb.2025.13221

Figure Lengend Snippet: Functional enrichment analysis of SP-DEGs in the GSE83448 dataset. (A) The bubble plot illustrates key enriched terms across various categories. BP denotes biological processes; CC indicates cellular components; and MF represents molecular functions. (B) The circle map emphasizes BPs associated with S-palmitoylation. (C) The bar plot presents the results of the functional enrichment analysis, ranked by statistical significance. (D) The Circos plot visualizes the functional associations across categories. Abbreviations: SP-DEGs: S-palmitoylation-related differentially expressed genes; BP: Biological process; CC: Cellular component; MF: Molecular function.

Article Snippet: The gene expression microarray dataset GSE83448 was obtained from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI GEO; https://www.ncbi.nlm.nih.gov/geo/ ) [ ].

Techniques: Functional Assay

Journal: bioRxiv

Article Title: Integrative Multi-Omic Profiling of the Human Phosphatome Identifies DUSP15 as a Tumour-Selective Regulator of Immune-Metabolic Reprogramming in Chromophobe Renal Cell Carcinoma

doi: 10.1101/2025.11.15.688610

Figure Lengend Snippet:

Article Snippet: Gene Expression Omnibus (GEO) microarray datasets used for independent validation were obtained from the National Center for Biotechnology Information (NCBI) GEO repository ( https://www.ncbi.nlm.nih.gov/geo/ ) under accession numbers GSE2748, GSE11024, GSE11151, GSE12090, GSE16441, GSE17895, GSE19982, GSE36895, GSE46699, and GSE53757.

Techniques: Expressing, Microarray