Review



mega4 program  (Biodesign International Inc)

 
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
    • 90
      Buy from Supplier

    Structured Review

    Biodesign International Inc mega4 program
    Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using <t> MEGA4. </t> Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).
    Mega4 Program, supplied by Biodesign International Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mega4+program/mega+4+0/pmc03535300-109-23-28
    Average 90 stars, based on 1 article reviews
    mega4 program - by Bioz Stars, 2026-11
    90/100 stars

    Images

    1) Product Images from "Identification of a group of Mus dunni endogenous virus-like endogenous retroviruses from the C57BL/6J mouse genome: proviral genomes, strain distribution, expression characteristics, and genomic integration profile"

    Article Title: Identification of a group of Mus dunni endogenous virus-like endogenous retroviruses from the C57BL/6J mouse genome: proviral genomes, strain distribution, expression characteristics, and genomic integration profile

    Journal: Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology

    doi: 10.1007/s10577-012-9322-z

    Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using MEGA4. Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).
    Figure Legend Snippet: Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using MEGA4. Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).

    Techniques Used:

    Related Articles

    other:

    Article Title: Identification of a group of Mus dunni endogenous virus-like endogenous retroviruses from the C57BL/6J mouse genome: proviral genomes, strain distribution, expression characteristics, and genomic integration profile
    Article Snippet: Phylogenetic analyses Sequence diversity of two different MDL-ERV populations (cloned from the genomic DNAs of the C57BL/6J and Mus caroli/EiJ mice) was analyzed using the MEGA4 (Build 4028) program (The Biodesign Institute, Tempe, AZ) ( Tamura et al. 2007 ).

    Article Title: Identification of a group of Mus dunni endogenous virus-like endogenous retroviruses from the C57BL/6J mouse genome: proviral genomes, strain distribution, expression characteristics, and genomic integration profile
    Article Snippet: The U3 sequences of the individual MDL-ERVs isolated from the C57BL/6J and Mus caroli/EiJ mice were surveyed for transcription regulatory elements using MatInspector (v.8.04) (Genomatix, Munich, Germany).



    Similar Products

    mega4 program  (DNASTAR)
    90
    DNASTAR mega4 program
    Mega4 Program, supplied by DNASTAR, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mega4+program/mega+4+0/pm28457984-53-18-25
    Average 90 stars, based on 1 article reviews
    mega4 program - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier
    mega4 program  (Biodesign International Inc)
    90
    Biodesign International Inc mega4 program
    Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using <t> MEGA4. </t> Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).
    Mega4 Program, supplied by Biodesign International Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mega4+program/mega+4+0/pmc03535300-109-23-28
    Average 90 stars, based on 1 article reviews
    mega4 program - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier
    multiple alignment program mega4  (DNASTAR)
    90
    DNASTAR multiple alignment program mega4
    Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using <t> MEGA4. </t> Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).
    Multiple Alignment Program Mega4, supplied by DNASTAR, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mega4+program/mega+4+0/pmc03550739-89-9-14
    Average 90 stars, based on 1 article reviews
    multiple alignment program mega4 - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier
    program mega4  (Amura Ltd)
    90
    Amura Ltd program mega4
    Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using <t> MEGA4. </t> Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).
    Program Mega4, supplied by Amura Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mega4+program/program+mega4/pmc02644949-84-23-27
    Average 90 stars, based on 1 article reviews
    program mega4 - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using MEGA4. Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).

    Journal: Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology

    Article Title: Identification of a group of Mus dunni endogenous virus-like endogenous retroviruses from the C57BL/6J mouse genome: proviral genomes, strain distribution, expression characteristics, and genomic integration profile

    doi: 10.1007/s10577-012-9322-z

    Figure Lengend Snippet: Patterns of nucleotide substitution: MDL-ERVs in cluster-B versus 157 MDL-ERVs of ~8–9 Kb in size Transition and transversion rates in the MDL-ERV proviral sequences were measured using MEGA4. Numbers in bold indicate transitional substitutions. Ts (transition), Tv (transversion), k (transition/transversion rate ratio). R represents overall transition/transversion bias, with A representing the number of adenosines, G the number of guanosines, T the number of thymidines, and C the number of cytidines. (R=[A*G*k purines +T*C*k pyrimidines ]/[(A+G)*(T+C)]).

    Article Snippet: Sequence diversity of two different MDL-ERV populations (cloned from the genomic DNAs of the C57BL/6J and Mus caroli/EiJ mice) was analyzed using the MEGA4 (Build 4028) program (The Biodesign Institute, Tempe, AZ) ( Tamura et al. 2007 ).

    Techniques: