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pivlab matlab package  (MathWorks Inc)


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    MathWorks Inc pivlab matlab package
    MCT Analysis and Results (A) Overall workflow for MCT analysis. (B) Snapshots showing representative original MCT and the corresponding image after stationary particles were removed. The scale bar represents 100 μm. (C) <t>A</t> <t>screenshot</t> showing the GUI of the <t>PIVLab</t> Matlab package after running. (D) Snapshots showing important settings to input into the PIVLab GUI necessary for MCT analysis. (E) Snapshot showing representative results obtained from MCT analysis of differentiated hSAEpCs in a TWI. The velocity vector field is indicated by the arrows while its magnitude is shown by colors with values presented by the color bar. (F) A plot showing the histogram of MCT velocity obtained from the analysis in (E).
    Pivlab Matlab Package, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/matlab+package+pivlab/pmc11930158-254-14-15
    Average 90 stars, based on 1 article reviews
    pivlab matlab package - by Bioz Stars, 2026-10
    90/100 stars

    Images

    1) Product Images from "Protocol for characterizing airway epithelial ciliary beating and mucociliary transport using image processing and particle imaging velocimetry"

    Article Title: Protocol for characterizing airway epithelial ciliary beating and mucociliary transport using image processing and particle imaging velocimetry

    Journal: STAR Protocols

    doi: 10.1016/j.xpro.2025.103674

    MCT Analysis and Results (A) Overall workflow for MCT analysis. (B) Snapshots showing representative original MCT and the corresponding image after stationary particles were removed. The scale bar represents 100 μm. (C) A screenshot showing the GUI of the PIVLab Matlab package after running. (D) Snapshots showing important settings to input into the PIVLab GUI necessary for MCT analysis. (E) Snapshot showing representative results obtained from MCT analysis of differentiated hSAEpCs in a TWI. The velocity vector field is indicated by the arrows while its magnitude is shown by colors with values presented by the color bar. (F) A plot showing the histogram of MCT velocity obtained from the analysis in (E).
    Figure Legend Snippet: MCT Analysis and Results (A) Overall workflow for MCT analysis. (B) Snapshots showing representative original MCT and the corresponding image after stationary particles were removed. The scale bar represents 100 μm. (C) A screenshot showing the GUI of the PIVLab Matlab package after running. (D) Snapshots showing important settings to input into the PIVLab GUI necessary for MCT analysis. (E) Snapshot showing representative results obtained from MCT analysis of differentiated hSAEpCs in a TWI. The velocity vector field is indicated by the arrows while its magnitude is shown by colors with values presented by the color bar. (F) A plot showing the histogram of MCT velocity obtained from the analysis in (E).

    Techniques Used: Plasmid Preparation


    Figure Legend Snippet:

    Techniques Used: Recombinant, Software, Microscopy

    Related Articles

    other:

    Article Title: Actomyosin dynamics drive local membrane component organization in an in vitro active composite layer
    Article Snippet: The PIV procedure was performed using the MATLAB package PIVLab ( 76 ), the results of which were verified manually by comparing the flow vectors obtained with the flow observed in the movie.

    Article Title: Investigation of jet induced by direct contact condensation using PIV
    Article Snippet: The PIV analysis is performed with the MATLAB package PIVlab ©.

    Article Title: A cytokinetic ring-driven cell rotation achieves Hertwig's rule in early development.
    Article Snippet: Particle Image Velocimetry was performed using an open source Matlab package (PIVlab) (72).

    Software:

    Article Title: Oscillatory rheotaxis of artificial swimmers in microchannels
    Article Snippet: We analysed the flow in the aqueous swimming medium using the open source MATLAB package PIVlab , based on images extracted from videomicroscopy data with the open source software ffmpeg, and without any further preprocessing. .. We analysed the flow in the aqueous swimming medium using the open source MATLAB package PIVlab , based on images extracted from videomicroscopy data with the open source software ffmpeg, and without any further preprocessing. ..



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    CBF, CCP Analysis and Results (A) Snapshot showing the contents of the “info.xlsx” Microsoft Excel file. (B) Screenshot showing the commands and the corresponding input parameters to input into <t>MATLAB</t> when running the CBF, CCP analysis code. (C) A representative result of CBF, CCP analysis for the negative control that uses a blank TWI to determine background. (D) A representative result of CBF, CCP analysis for a TWI containing differentiated primary hSAEpCs. The heat map scales in C and D indicate beating frequency in Hertz. (E) Plot showing a representative CBF histogram obtained from the data in D and processed using GraphPad Prism 9. (F) Table summarizing several representative statistical parameters that can be obtained from analyzed CBF data using Descriptive Statistics tool from GraphPad Prism 9, to further characterize beating behaviors of cilia.
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    CBF, CCP Analysis and Results (A) Snapshot showing the contents of the “info.xlsx” Microsoft Excel file. (B) Screenshot showing the commands and the corresponding input parameters to input into <t>MATLAB</t> when running the CBF, CCP analysis code. (C) A representative result of CBF, CCP analysis for the negative control that uses a blank TWI to determine background. (D) A representative result of CBF, CCP analysis for a TWI containing differentiated primary hSAEpCs. The heat map scales in C and D indicate beating frequency in Hertz. (E) Plot showing a representative CBF histogram obtained from the data in D and processed using GraphPad Prism 9. (F) Table summarizing several representative statistical parameters that can be obtained from analyzed CBF data using Descriptive Statistics tool from GraphPad Prism 9, to further characterize beating behaviors of cilia.
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    Image Search Results


    MCT Analysis and Results (A) Overall workflow for MCT analysis. (B) Snapshots showing representative original MCT and the corresponding image after stationary particles were removed. The scale bar represents 100 μm. (C) A screenshot showing the GUI of the PIVLab Matlab package after running. (D) Snapshots showing important settings to input into the PIVLab GUI necessary for MCT analysis. (E) Snapshot showing representative results obtained from MCT analysis of differentiated hSAEpCs in a TWI. The velocity vector field is indicated by the arrows while its magnitude is shown by colors with values presented by the color bar. (F) A plot showing the histogram of MCT velocity obtained from the analysis in (E).

    Journal: STAR Protocols

    Article Title: Protocol for characterizing airway epithelial ciliary beating and mucociliary transport using image processing and particle imaging velocimetry

    doi: 10.1016/j.xpro.2025.103674

    Figure Lengend Snippet: MCT Analysis and Results (A) Overall workflow for MCT analysis. (B) Snapshots showing representative original MCT and the corresponding image after stationary particles were removed. The scale bar represents 100 μm. (C) A screenshot showing the GUI of the PIVLab Matlab package after running. (D) Snapshots showing important settings to input into the PIVLab GUI necessary for MCT analysis. (E) Snapshot showing representative results obtained from MCT analysis of differentiated hSAEpCs in a TWI. The velocity vector field is indicated by the arrows while its magnitude is shown by colors with values presented by the color bar. (F) A plot showing the histogram of MCT velocity obtained from the analysis in (E).

    Article Snippet: The scale bar represents 100 μm. (C) A screenshot showing the GUI of the PIVLab Matlab package after running. (D) Snapshots showing important settings to input into the PIVLab GUI necessary for MCT analysis. (E) Snapshot showing representative results obtained from MCT analysis of differentiated hSAEpCs in a TWI.

    Techniques: Plasmid Preparation

    Journal: STAR Protocols

    Article Title: Protocol for characterizing airway epithelial ciliary beating and mucociliary transport using image processing and particle imaging velocimetry

    doi: 10.1016/j.xpro.2025.103674

    Figure Lengend Snippet:

    Article Snippet: The scale bar represents 100 μm. (C) A screenshot showing the GUI of the PIVLab Matlab package after running. (D) Snapshots showing important settings to input into the PIVLab GUI necessary for MCT analysis. (E) Snapshot showing representative results obtained from MCT analysis of differentiated hSAEpCs in a TWI.

    Techniques: Recombinant, Software, Microscopy

    CBF, CCP Analysis and Results (A) Snapshot showing the contents of the “info.xlsx” Microsoft Excel file. (B) Screenshot showing the commands and the corresponding input parameters to input into MATLAB when running the CBF, CCP analysis code. (C) A representative result of CBF, CCP analysis for the negative control that uses a blank TWI to determine background. (D) A representative result of CBF, CCP analysis for a TWI containing differentiated primary hSAEpCs. The heat map scales in C and D indicate beating frequency in Hertz. (E) Plot showing a representative CBF histogram obtained from the data in D and processed using GraphPad Prism 9. (F) Table summarizing several representative statistical parameters that can be obtained from analyzed CBF data using Descriptive Statistics tool from GraphPad Prism 9, to further characterize beating behaviors of cilia.

    Journal: STAR Protocols

    Article Title: Protocol for characterizing airway epithelial ciliary beating and mucociliary transport using image processing and particle imaging velocimetry

    doi: 10.1016/j.xpro.2025.103674

    Figure Lengend Snippet: CBF, CCP Analysis and Results (A) Snapshot showing the contents of the “info.xlsx” Microsoft Excel file. (B) Screenshot showing the commands and the corresponding input parameters to input into MATLAB when running the CBF, CCP analysis code. (C) A representative result of CBF, CCP analysis for the negative control that uses a blank TWI to determine background. (D) A representative result of CBF, CCP analysis for a TWI containing differentiated primary hSAEpCs. The heat map scales in C and D indicate beating frequency in Hertz. (E) Plot showing a representative CBF histogram obtained from the data in D and processed using GraphPad Prism 9. (F) Table summarizing several representative statistical parameters that can be obtained from analyzed CBF data using Descriptive Statistics tool from GraphPad Prism 9, to further characterize beating behaviors of cilia.

    Article Snippet: PIVlab v.3.02 MATLAB packages , PIVlab , Link download.

    Techniques: Negative Control

    MCT Analysis and Results (A) Overall workflow for MCT analysis. (B) Snapshots showing representative original MCT and the corresponding image after stationary particles were removed. The scale bar represents 100 μm. (C) A screenshot showing the GUI of the PIVLab Matlab package after running. (D) Snapshots showing important settings to input into the PIVLab GUI necessary for MCT analysis. (E) Snapshot showing representative results obtained from MCT analysis of differentiated hSAEpCs in a TWI. The velocity vector field is indicated by the arrows while its magnitude is shown by colors with values presented by the color bar. (F) A plot showing the histogram of MCT velocity obtained from the analysis in (E).

    Journal: STAR Protocols

    Article Title: Protocol for characterizing airway epithelial ciliary beating and mucociliary transport using image processing and particle imaging velocimetry

    doi: 10.1016/j.xpro.2025.103674

    Figure Lengend Snippet: MCT Analysis and Results (A) Overall workflow for MCT analysis. (B) Snapshots showing representative original MCT and the corresponding image after stationary particles were removed. The scale bar represents 100 μm. (C) A screenshot showing the GUI of the PIVLab Matlab package after running. (D) Snapshots showing important settings to input into the PIVLab GUI necessary for MCT analysis. (E) Snapshot showing representative results obtained from MCT analysis of differentiated hSAEpCs in a TWI. The velocity vector field is indicated by the arrows while its magnitude is shown by colors with values presented by the color bar. (F) A plot showing the histogram of MCT velocity obtained from the analysis in (E).

    Article Snippet: PIVlab v.3.02 MATLAB packages , PIVlab , Link download.

    Techniques: Plasmid Preparation

    Journal: STAR Protocols

    Article Title: Protocol for characterizing airway epithelial ciliary beating and mucociliary transport using image processing and particle imaging velocimetry

    doi: 10.1016/j.xpro.2025.103674

    Figure Lengend Snippet:

    Article Snippet: PIVlab v.3.02 MATLAB packages , PIVlab , Link download.

    Techniques: Recombinant, Software, Microscopy