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locarna  (Informatik Inc)

 
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    Informatik Inc locarna
    Locarna, supplied by Informatik Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/locarna/locarna/10__5507_slash_fot__2023__013-54-13-26
    Average 86 stars, based on 1 article reviews
    locarna - by Bioz Stars, 2026-08
    86/100 stars

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    ITS2 sequence structure-based alignment generated by LocaRNA-P. Dot-bracket notation represents unpaired bases and matching parenthesized positions represent paired bases. The red regions indicate structure reliability, the yellow regions represent sequence reliability, and the thin line shows the combined column-reliability.

    Journal: Journal of Fungi

    Article Title: Compensatory Base Changes in ITS2 Secondary Structure Alignment, Modelling, and Molecular Phylogeny: An Integrated Approach to Improve Species Delimitation in Tulasnella (Basidiomycota)

    doi: 10.3390/jof9090894

    Figure Lengend Snippet: ITS2 sequence structure-based alignment generated by LocaRNA-P. Dot-bracket notation represents unpaired bases and matching parenthesized positions represent paired bases. The red regions indicate structure reliability, the yellow regions represent sequence reliability, and the thin line shows the combined column-reliability.

    Article Snippet: Then, these structures were input into LocARNA v2.0 ( https://rna.informatik.uni-freiburg.de/LocARNA/Input.jsp;jsessionid=115161C5C9E9AB44CC6D3C81763A1699 , accessed on 2 February 2022) [ ] software to perform structural-alignment and consensus secondary structure modelling—see .

    Techniques: Sequencing, Generated