healthy brain tissue (OriGene)
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Healthy Brain Tissue, supplied by OriGene, used in various techniques. Bioz Stars score: 94/100, based on 11 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/human+array/TissueScan%2C+Human+Brain+cDNA+Array/pm42236120-298-30-39
Average 94 stars, based on 11 article reviews
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Gene Knockout:Article Title: Tumor-intrinsic expression of signal regulatory protein α contributes to the suppression of anti-tumor immune responses. Article Snippet: .. For human melanoma SK-MEL-19 cells, we purchased the Article Title: Targeted delivery of glucocerebrosidase to lysosomes: The LYSOTAC (LYSOsome-TArgeting Chimera) technology Article Snippet: .. LIMP-2-deficient HEK293 cells were produced using a CRISPR:Article Title: Tumor-intrinsic expression of signal regulatory protein α contributes to the suppression of anti-tumor immune responses. Article Snippet: .. For human melanoma SK-MEL-19 cells, we purchased the Article Title: Stabilization of cyclin D3 protein by CDKN1A (p21 Cip/Waf1 ) in butyrate-treated cells. Article Snippet: .. Article Title: Stabilization of cyclin D3 protein by CDKN1A (p21 Cip/Waf1 ) in butyrate-treated cells Article Snippet: The Caco-2 cell line was purchased from ATCC and cultured in DMEM (10,000 U Penicillin, 10 mg/ml Streptomycin, 20% FCS). .. We used the KN2.0 kit from Origene, which includes a donor cassette for a Article Title: Targeted delivery of glucocerebrosidase to lysosomes: The LYSOTAC (LYSOsome-TArgeting Chimera) technology Article Snippet: .. LIMP-2-deficient HEK293 cells were produced using a Knock-Out:Article Title: Stabilization of cyclin D3 protein by CDKN1A (p21 Cip/Waf1 ) in butyrate-treated cells. Article Snippet: .. Article Title: Stabilization of cyclin D3 protein by CDKN1A (p21 Cip/Waf1 ) in butyrate-treated cells Article Snippet: The Caco-2 cell line was purchased from ATCC and cultured in DMEM (10,000 U Penicillin, 10 mg/ml Streptomycin, 20% FCS). .. We used the KN2.0 kit from Origene, which includes a donor cassette for a Software:Article Title: Novel CAR T cell blend targeting PDPN and GD2 to overcome glioblastoma heterogeneity. Article Snippet: Acquisitions were conducted using a Cytek Northern Lights system (Cytek). .. Subsequent data analysis was performed with the Data Analysis Software Suite for LEGENDplex. qPCR Pooled cDNA from healthy organs (Human MTC Panel I and II, Takara Bio, Kusatsu, Japan) and Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Real-time Polymerase Chain Reaction:Article Title: Novel CAR T cell blend targeting PDPN and GD2 to overcome glioblastoma heterogeneity. Article Snippet: Acquisitions were conducted using a Cytek Northern Lights system (Cytek). .. Subsequent data analysis was performed with the Data Analysis Software Suite for LEGENDplex. qPCR Pooled cDNA from healthy organs (Human MTC Panel I and II, Takara Bio, Kusatsu, Japan) and Expressing:Article Title: Novel CAR T cell blend targeting PDPN and GD2 to overcome glioblastoma heterogeneity. Article Snippet: Acquisitions were conducted using a Cytek Northern Lights system (Cytek). .. Subsequent data analysis was performed with the Data Analysis Software Suite for LEGENDplex. qPCR Pooled cDNA from healthy organs (Human MTC Panel I and II, Takara Bio, Kusatsu, Japan) and Protease Inhibitor:Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Saline:Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Milk:Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Staining:Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Centrifugation:Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Enzyme-linked Immunosorbent Assay:Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Protein Array:Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Bicinchoninic Acid Protein Assay:Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Microelectrode Array:Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Recombinant:Article Title: Synaptophysin autoantibodies mediate synaptic dysfunction in cerebellar ataxia. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Chicken anti-MAP2 Abcam CAT#: ab5392; RRID: AB_2138153 Rabbit anti-Na/K ATPase Invitrogen CAT#: MA5-32184; RRID: AB_2809472 Guinea pig anti-Synapsin 1 Synaptic Systems CAT#: 106 004; RRID: AB_1106784 Mouse anti-SYP BioTechne CAT#: MAB5555; RRID: AB_3658464 Mouse anti-SYP antibody Dako CAT#: GA66061-2; RRID: AB_3698021 Rabbit anti-vGLUT1/2 Synaptic Systems CAT#: 135 403; RRID: AB_887883 Rabbit anti-vGLUT1 Synaptic Systems CAT#: 135 303; RRID: AB_887875 Donkey anti-Mouse IgG – AF488 Thermos Fisher CAT#: A21202; RRID: AB_141607 Goat anti-Chicken IgY- AF594 Thermo Fisher CAT#: A11042; RRID: AB_2534099 Goat anti-Human IgG - AF488 Southern Biotech CAT#: 2049–30; RRID: AB_2795698 Goat anti-Human IgG – AF647 Thermo Fisher CAT#: A21445; RRID: AB_2535862 Mouse anti-Human IgG1 – biotinylated Southern biotech CAT#: 9052–08; RRID: AB_2796620 Mouse anti-Human IgG2 – biotinylated Southern biotech CAT#: 9060–08; RRID: AB_2796634 Mouse anti-Human IgG3 – biotinylated Southern biotech CAT#: 9210–08; RRID: AB_2796700 Mouse anti-Human IgG4 – biotinylated Southern biotech CAT#: 9200–08; RRID: AB_2796692 Rat anti-Mouse IgG - AF647 Jackson CAT#: 415-605-166; RRID: AB_2340285 Streptavidin IRDye 800 Licor CAT#: 926–32230 Bacterial and virus strains NEB® 5-alpha Competent E. coli (High Efficiency) New England Biolabs C2987 Biological samples Human cerebellum whole lysate Novus Biologicals NB820-59180 Human cerebellum membrane lysate Novus Biologicals NB820-60572 EUROIMMUN Neurology Mosaic 17 (Primate cerebellar tissue sections) EUROIMMUN FB1111-1010-17 EUROIMMUN IIFT Glutamate Receptor Mosaik 3 (Rodent cerebellar tissue sections) EUROIMMUN FA111m-1003-3 Chemicals, peptides, and recombinant proteins 2-Mercaptoethanol ThermoFisher 31350010 2-Propanol (for Analysis) [(CH3)2CHOH] MW: 60.10 g/mol, CAS No. [67-63-0] Merck 1.09634.2511 4′,6-diamidino-2-phenylindole (DAPI) Thermo Fisher 62248 4% paraformaldehyde (PFA) Santa Cruz Biotechnology sc-281692 B27 ThermoFisher 17504044 BDNF R&D 248-BDB-005 Borate buffer (20×) ThermoFisher 28341 Bovine serum albumin (BSA) Sigma A3059 DAPT Biotechne 2634 DMEM - high glucose Sigma D5796 Doxycycline Sigma D9891 Ethanol absolut, EMSURE® [C2H5OH] MW: 46,07 g/mol, CAS No.[64-17-5] Merck 1.00983.2511 FBS Superior; standardized Fetal Bovine Serum Merck S0615 Fluorescence Mounting Medium Dako S3023 (Continued on next page) e1 Cell Reports Medicine 7, 102822, June 16, 2026 Article ll OPEN ACCESS .. REAGENT or RESOURCE SOURCE IDENTIFIER Geltrex (Reduced GF) ThermoFisher A1413202 Glutamax ThermoFisher 35050061 HaltTM Protease Inhibitor Cocktail (100×) Thermo Scientific 1862209 Methanol ≥99.9%, EMSURE® [CH3OH] MW: 32,04 g/mol, CAS No.[67-56-1] Merck 1.06009.2511 Neurobasal ThermoFisher 21103049 Normal Goat Serum Thermo ScientificTM 16210064 Novex TM Sharp Pre-stained Protein Standard Invitrogen LC5800 NT3 R&D 267-N3-005 NuPAGETM LDS Sample Buffer (4×) Thermo fisher NP0007 NuPAGETM Sample Reducing Agent (10×) Thermo fisher NP0009 NuPAGETM MOPS SDS Running Buffer (20×) Thermo fisher NP0001 NuPAGETM Transfer Buffer (20×) Thermo fisher NP00061 OptiMEM (1×) Gibco 31985–062 PBS – Phosphate-Buffered Saline Thermo ScientificTM 10010015 PDL-hydrobromide Sigma P6407 Penicillin-Streptomycin (10,000 U/mL) Gibco 15140122 Saponin Sigma 84510 Skimmed Milk Powder Spinnrad 2231018 Triton® X 100 Sigma Aldrich T8787 Trypan Blue Stain (0.4%) InvitrogenTM T10282 Tween 20, 100% Nonionic Detergent Bio-Rad Laboratories 1706531 UltraPureTM DNase/RNase-Free Distilled Water InvitrogenTM 10977–035 Vectashield HardSet Antifade mounting media VectorLab H-1400-10 Critical commercial assays Amicon® Ultra Centrifugation filter 30 kDa MWCO Merck UFC9030 Human IgG ELISA MabTech 3850-1AD-6 HuProt v4.0 Protein array PEPperPRINT N/A Lipofectamine 2000 Thermo Fisher 11668019 NAbTM Protein A/G Spin Kit Thermo Fisher 89980 PierceTM BCA Protein Assay Kits Thermo Fisher 23225 Deposited data Neuronal differentiation and MEA plating using an inducible NGN2 hiPSC-line Technology Platform Pluripotent Stem Cells of the Max Delbrück Center https://doi.org/10.17504/protocols.io. kqdg3q54ev25/v1 Experimental models: Cell lines HeLa cells N/A N/A ioGlutamatergic neurons bit.bio io1001 hiPSC-derived glutamatergic neurons Technology Platform Pluripotent Stem Cells of the Max Delbrück Center hiPSC line BIHi005-A-24 Recombinant DNA mCer-hSYP Prof. Mike Cousin (University of Edinburgh) N/A CD2-EmGFP Lenti ORF clone of Produced:Article Title: Targeted delivery of glucocerebrosidase to lysosomes: The LYSOTAC (LYSOsome-TArgeting Chimera) technology Article Snippet: .. LIMP-2-deficient HEK293 cells were produced using a |

