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electrophysiology data analysis  (MathWorks Inc)


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    Structured Review

    MathWorks Inc electrophysiology data analysis
    Chronic in vivo recording of nerve activity. a) Representative example of chronic TSN recording aligned to the song. (Top) Spectrogram of the bird's song; color indicates power intensity at each time‐frequency bin. (Bottom) <t>Electrophysiology</t> activity recorded from the TSN simultaneously with the song motif shown at top; timescale aligned to Figure at the bottom. Color here and in all other subpanels indicates the recording channel. b) Mean song‐aligned TSN activity envelope over n = 10 consecutive motifs for each channel. Same animal as shown in (a). c) Matrix of pair‐wise correlations between mean song‐aligned activity envelopes from each channel (n = 50 each channel; 300 total) for the representative animal shown in (a). Row and column relations to channel indicated by colored lines at left and bottom. d) Mean pair‐wise correlation between nerve activity envelopes recorded within (left) and across (right) μcPNI electrode in n = 3 birds. In each, data points show mean across electrodes within a bird. Bars show mean across all birds; error bars indicate std. ** P < 0.01 two‐tailed paired t‐test, P = 0.008. e) Metrics demonstrating stable performance of each μcPNI channel over time. (Left) Mean daily trial‐by‐trial Pearson's correlation to the average activity pattern on the 1st day of recording. (Center) Mean daily peak‐to‐peak voltage. (Right) Mean daily event rate. f) Same as in (e), but showing mean statistics across all electrode channels in n = 3 birds (two‐tailed paired t‐test; correlation: P > 0.17; V pp : P > 0.68; event rate: P > 0.37).
    Electrophysiology Data Analysis, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/electrophysiology+data+analysis/pmc08787429-266-1-8
    Average 90 stars, based on 1 article reviews
    electrophysiology data analysis - by Bioz Stars, 2026-10
    90/100 stars

    Images

    1) Product Images from "A Microclip Peripheral Nerve Interface (μcPNI) for Bioelectronic Interfacing with Small Nerves"

    Article Title: A Microclip Peripheral Nerve Interface (μcPNI) for Bioelectronic Interfacing with Small Nerves

    Journal: Advanced Science

    doi: 10.1002/advs.202102945

    Chronic in vivo recording of nerve activity. a) Representative example of chronic TSN recording aligned to the song. (Top) Spectrogram of the bird's song; color indicates power intensity at each time‐frequency bin. (Bottom) Electrophysiology activity recorded from the TSN simultaneously with the song motif shown at top; timescale aligned to Figure at the bottom. Color here and in all other subpanels indicates the recording channel. b) Mean song‐aligned TSN activity envelope over n = 10 consecutive motifs for each channel. Same animal as shown in (a). c) Matrix of pair‐wise correlations between mean song‐aligned activity envelopes from each channel (n = 50 each channel; 300 total) for the representative animal shown in (a). Row and column relations to channel indicated by colored lines at left and bottom. d) Mean pair‐wise correlation between nerve activity envelopes recorded within (left) and across (right) μcPNI electrode in n = 3 birds. In each, data points show mean across electrodes within a bird. Bars show mean across all birds; error bars indicate std. ** P < 0.01 two‐tailed paired t‐test, P = 0.008. e) Metrics demonstrating stable performance of each μcPNI channel over time. (Left) Mean daily trial‐by‐trial Pearson's correlation to the average activity pattern on the 1st day of recording. (Center) Mean daily peak‐to‐peak voltage. (Right) Mean daily event rate. f) Same as in (e), but showing mean statistics across all electrode channels in n = 3 birds (two‐tailed paired t‐test; correlation: P > 0.17; V pp : P > 0.68; event rate: P > 0.37).
    Figure Legend Snippet: Chronic in vivo recording of nerve activity. a) Representative example of chronic TSN recording aligned to the song. (Top) Spectrogram of the bird's song; color indicates power intensity at each time‐frequency bin. (Bottom) Electrophysiology activity recorded from the TSN simultaneously with the song motif shown at top; timescale aligned to Figure at the bottom. Color here and in all other subpanels indicates the recording channel. b) Mean song‐aligned TSN activity envelope over n = 10 consecutive motifs for each channel. Same animal as shown in (a). c) Matrix of pair‐wise correlations between mean song‐aligned activity envelopes from each channel (n = 50 each channel; 300 total) for the representative animal shown in (a). Row and column relations to channel indicated by colored lines at left and bottom. d) Mean pair‐wise correlation between nerve activity envelopes recorded within (left) and across (right) μcPNI electrode in n = 3 birds. In each, data points show mean across electrodes within a bird. Bars show mean across all birds; error bars indicate std. ** P < 0.01 two‐tailed paired t‐test, P = 0.008. e) Metrics demonstrating stable performance of each μcPNI channel over time. (Left) Mean daily trial‐by‐trial Pearson's correlation to the average activity pattern on the 1st day of recording. (Center) Mean daily peak‐to‐peak voltage. (Right) Mean daily event rate. f) Same as in (e), but showing mean statistics across all electrode channels in n = 3 birds (two‐tailed paired t‐test; correlation: P > 0.17; V pp : P > 0.68; event rate: P > 0.37).

    Techniques Used: In Vivo, Activity Assay, Two Tailed Test

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    Article Title: Dopamine Modulation of Prefrontal Cortex Activity Is Manifold and Operates at Multiple Temporal and Spatial Scales.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies mouse anti-TH Millipore Cat# MAB318; RRID:AB_2201528 chicken anti-EGFP Abcam Cat# ab13970; RRID:AB_300798 Cy3-tagged donkey anti-mouse Jackson ImmunoResearch Cat# 715-165-150; RRID:AB_2340813 Alexa Fluor 488-tagged donkey anti-chicken Jackson ImmunoResearch Cat# 703-546-155; RRID:AB_2340376 Bacterial and Virus Strains AAV5-Ef1a-DIO-hChR2-eYFP UNC Vector Core N/A Experimental Models: Organisms/Strains Rat Th::Cre Deisseroth Lab Witten et al., 2011 Software and Algorithms SPSS for microdialysis data analysis IBM N/A Custom written software in MATLAB for electrophysiology data analysis This paper N/A Chronux toolbox for FFT LFP analysis Bokil et al., 2010 http://chronux.org/ EEGLab toolbox for LFP filtering Delorme and Makeig, 2004 https://sccn.ucsd.edu/eeglab/index.php Circular Statistic toolbox for LFP phase locking analysis Berens, 2009 https://www.mathworks.com/matlabcentral/ fileexchange/10676-circular-statistics-toolboxdirectional-statistics Cross-Frequency toolbox for LFP phase amplitude coupling analysis Voloh et al., 2015 http://accl.psy.vanderbilt.edu/resources/ analysis-tools/cross-frequency-interactions/ NDTools toolbox for continuous wavelet LFP analysis Gilley Neurodynamics Lab N/A Other Microwire Electrode Array NB Labs N/A Microdialysis Probe CMA Microdialysis Cat# 8010433 Optical Fiber Doric Lenses Code# MFC_200/240-0.22_15mm_MF2.5_FLT Optrode This paper N/A Omniplex Recording System Plexon N/A Infrared Activity Monitor Coulbourn Cat# H24-61 ..

    Activity Assay:

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    Image Search Results


    Chronic in vivo recording of nerve activity. a) Representative example of chronic TSN recording aligned to the song. (Top) Spectrogram of the bird's song; color indicates power intensity at each time‐frequency bin. (Bottom) Electrophysiology activity recorded from the TSN simultaneously with the song motif shown at top; timescale aligned to Figure at the bottom. Color here and in all other subpanels indicates the recording channel. b) Mean song‐aligned TSN activity envelope over n = 10 consecutive motifs for each channel. Same animal as shown in (a). c) Matrix of pair‐wise correlations between mean song‐aligned activity envelopes from each channel (n = 50 each channel; 300 total) for the representative animal shown in (a). Row and column relations to channel indicated by colored lines at left and bottom. d) Mean pair‐wise correlation between nerve activity envelopes recorded within (left) and across (right) μcPNI electrode in n = 3 birds. In each, data points show mean across electrodes within a bird. Bars show mean across all birds; error bars indicate std. ** P < 0.01 two‐tailed paired t‐test, P = 0.008. e) Metrics demonstrating stable performance of each μcPNI channel over time. (Left) Mean daily trial‐by‐trial Pearson's correlation to the average activity pattern on the 1st day of recording. (Center) Mean daily peak‐to‐peak voltage. (Right) Mean daily event rate. f) Same as in (e), but showing mean statistics across all electrode channels in n = 3 birds (two‐tailed paired t‐test; correlation: P > 0.17; V pp : P > 0.68; event rate: P > 0.37).

    Journal: Advanced Science

    Article Title: A Microclip Peripheral Nerve Interface (μcPNI) for Bioelectronic Interfacing with Small Nerves

    doi: 10.1002/advs.202102945

    Figure Lengend Snippet: Chronic in vivo recording of nerve activity. a) Representative example of chronic TSN recording aligned to the song. (Top) Spectrogram of the bird's song; color indicates power intensity at each time‐frequency bin. (Bottom) Electrophysiology activity recorded from the TSN simultaneously with the song motif shown at top; timescale aligned to Figure at the bottom. Color here and in all other subpanels indicates the recording channel. b) Mean song‐aligned TSN activity envelope over n = 10 consecutive motifs for each channel. Same animal as shown in (a). c) Matrix of pair‐wise correlations between mean song‐aligned activity envelopes from each channel (n = 50 each channel; 300 total) for the representative animal shown in (a). Row and column relations to channel indicated by colored lines at left and bottom. d) Mean pair‐wise correlation between nerve activity envelopes recorded within (left) and across (right) μcPNI electrode in n = 3 birds. In each, data points show mean across electrodes within a bird. Bars show mean across all birds; error bars indicate std. ** P < 0.01 two‐tailed paired t‐test, P = 0.008. e) Metrics demonstrating stable performance of each μcPNI channel over time. (Left) Mean daily trial‐by‐trial Pearson's correlation to the average activity pattern on the 1st day of recording. (Center) Mean daily peak‐to‐peak voltage. (Right) Mean daily event rate. f) Same as in (e), but showing mean statistics across all electrode channels in n = 3 birds (two‐tailed paired t‐test; correlation: P > 0.17; V pp : P > 0.68; event rate: P > 0.37).

    Article Snippet: All electrophysiology data analysis was performed off‐line using MATLAB.

    Techniques: In Vivo, Activity Assay, Two Tailed Test