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clustal-w program  (MacVector inc)

 
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    MacVector inc clustal-w program
    Clustal W Program, supplied by MacVector inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/clustal+w+program/clustal+w+program/us12358956-149-23-26
    Average 90 stars, based on 1 article reviews
    clustal-w program - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Sequencing:

    Article Title: A CD300c-Fc Fusion Protein Inhibits T Cell Immunity
    Article Snippet: .. Sequence alignments of CD300c and known B7 family members, and CD300c orthologous proteins were analyzed via the Clustal W program in MacVector 16.0.5 (MacVector, Inc.). .. The leader peptide, transmembrane, and Ig-like domain were predicted with SignalP 4.0 ( http://www.cbs.dtu.dk/services/SignalP ), TMHMM server version 2.0 ( http://www.cbs.dtu.dk/services/TMHMM/ ), and InterPro ( https://www.ebi.ac.uk/interpro ).

    other:

    Article Title: Characterization and functional expression of a rubber degradation gene of a Nocardia degrader from a rubber-processing factory.
    Article Snippet: Please cite degrader fr A rubber-degrading bacterial consortium named H2DA was obtained from an enrichment culture with natural rubber latex and rubber-processing factory waste in Vietnam.. Gel permeation chromatography analysis revealed that only the strain NVL3 degraded synthetic poly(cis-1,4-isoprene) into low-molecular-weight intermediates among the three strains found in the H2DA.. The 16S-rRNA gene sequence of NVL3 showed the highest identity with that of Nocardia farcinica DSM 43665T.

    Software:

    Article Title: A SIV molecular clone that targets the CNS and induces neuroAIDS in rhesus macaques
    Article Snippet: .. Full length SIV envelope sequences were aligned using the Clustal W program from the MacVector 15.1.1 software suite (MacVector Inc, Apex NC USA) with minor manual adjustments. ..



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    Fig. 1. Molecular characterization of CPB proteasome subunit beta type-5 (CPB-PSMB5). (A) Prediction of signature motifs and alignment of nucleotide sequences of CPB-PSMB5 with other four well-known insect and potato plant PSMB5. Sequence alignment used Clustal W program of MegAlign (DNASTAR, Version 7.0). Species acronyms and GenBank accession numbers of PSMB5 amino acids are listed in Table S1. (B) Predicted three-dimensional structure of CPB-PSMB5 showing key structural domains. Alpha-helices and beta-sheets are depicted in the model as cyan, and yellow, respectively. The beta subunit interaction site domain is highlighted in brown. Green regions represent the active site. (C) Phylogenetic tree of CPB-PSMB5 (highlighted in a red rounded rectangle) and other PSMB5 sequences from different insect orders. The tree was generated with MEGA 7 using Neighbor-joining method. Bootstrap values on nodes were obtained with 1000 replicates. GenBank accession numbers are provided in Supplementary Table S1. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)

    Journal: Pesticide Biochemistry and Physiology

    Article Title: Development and efficacy of dsRNA pesticides targeting the Colorado potato beetle with enhanced stability via chitosan formulations

    doi: 10.1016/j.pestbp.2025.106606

    Figure Lengend Snippet: Fig. 1. Molecular characterization of CPB proteasome subunit beta type-5 (CPB-PSMB5). (A) Prediction of signature motifs and alignment of nucleotide sequences of CPB-PSMB5 with other four well-known insect and potato plant PSMB5. Sequence alignment used Clustal W program of MegAlign (DNASTAR, Version 7.0). Species acronyms and GenBank accession numbers of PSMB5 amino acids are listed in Table S1. (B) Predicted three-dimensional structure of CPB-PSMB5 showing key structural domains. Alpha-helices and beta-sheets are depicted in the model as cyan, and yellow, respectively. The beta subunit interaction site domain is highlighted in brown. Green regions represent the active site. (C) Phylogenetic tree of CPB-PSMB5 (highlighted in a red rounded rectangle) and other PSMB5 sequences from different insect orders. The tree was generated with MEGA 7 using Neighbor-joining method. Bootstrap values on nodes were obtained with 1000 replicates. GenBank accession numbers are provided in Supplementary Table S1. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)

    Article Snippet: Sequence alignment was performed using the Clustal W program within MegAlign (DNASTAR, Version 7.0).

    Techniques: Sequencing, Generated