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bisulfite conversion, sequenom massarray epityping  (Sequenom)

 
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    Structured Review

    Sequenom bisulfite conversion, sequenom massarray epityping
    A summary of selected articles in this systematic review
    Bisulfite Conversion, Sequenom Massarray Epityping, supplied by Sequenom, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/bisulfite-sequenom+massarray+epityper/massarray+epityping/pmc06362194-64-28-27
    Average 90 stars, based on 1 article reviews
    bisulfite conversion, sequenom massarray epityping - by Bioz Stars, 2026-09
    90/100 stars

    Images

    1) Product Images from "What do DNA methylation studies tell us about depression? A systematic review"

    Article Title: What do DNA methylation studies tell us about depression? A systematic review

    Journal: Translational Psychiatry

    doi: 10.1038/s41398-019-0412-y

    A summary of selected articles in this systematic review
    Figure Legend Snippet: A summary of selected articles in this systematic review

    Techniques Used: DNA Methylation Assay, Genome Wide, Methylation, Variant Assay, Derivative Assay, Biomarker Assay, Expressing, Software, Binding Assay, Sequencing, EpiTYPER Assay, CpG Methylation Assay, Enzyme-linked Immunosorbent Assay, Immunoprecipitation, Methylated DNA Immunoprecipitation Sequencing, Real-time Polymerase Chain Reaction, SYBR Green Assay, Marker

    Related Articles

    Microarray:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Biomarker Discovery:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Genome Wide:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    RNA Expression:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Preserving:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Methylation:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Immunohistochemistry:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Western Blot:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Activity Assay:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Binding Assay:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Methylated DNA Immunoprecipitation:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    DNA Methylation Assay:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Cell Culture:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Extraction:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Methylation Sequencing:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Transformation Assay:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Sequencing:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Methylated DNA Immunoprecipitation Sequencing:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Phospho-proteomics:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Glycoproteomics:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Luciferase:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Starch:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    In Vitro:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Expressing:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Transduction:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Ubiquitin Proteomics:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Clinical Proteomics:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Membrane:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Cell Differentiation:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Control:

    Article Title: Epigenetic Mechanisms of the Aging Human Retina
    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.



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    Image Search Results


    A summary of selected articles in this systematic review

    Journal: Translational Psychiatry

    Article Title: What do DNA methylation studies tell us about depression? A systematic review

    doi: 10.1038/s41398-019-0412-y

    Figure Lengend Snippet: A summary of selected articles in this systematic review

    Article Snippet: 65 , Olsson et al. , 2010 , Australia , 150 , Australian adolescents (cases and controls) , Case–control , MDD , Buccal cells , Bisulfite conversion, Sequenom MassARRAY EpiTyping , SLC6A4 , Promoters, CpG islands , There was no association between depressive symptoms and either buccal cell 5-HTT methylation or 5-HTTLPR. Depressive symptoms were more common among those with elevated buccal cell 5-HTT methylation who carried a 5-HTTLPR short allele.

    Techniques: DNA Methylation Assay, Genome Wide, Methylation, Variant Assay, Derivative Assay, Biomarker Assay, Expressing, Software, Binding Assay, Sequencing, EpiTYPER Assay, CpG Methylation Assay, Enzyme-linked Immunosorbent Assay, Immunoprecipitation, Methylated DNA Immunoprecipitation Sequencing, Real-time Polymerase Chain Reaction, SYBR Green Assay, Marker

    Genome-wide epigenetic studies of retinal disease, risk factors, and related pathologies.

    Journal: Journal of Experimental Neuroscience

    Article Title: Epigenetic Mechanisms of the Aging Human Retina

    doi: 10.4137/JEN.S25513

    Figure Lengend Snippet: Genome-wide epigenetic studies of retinal disease, risk factors, and related pathologies.

    Article Snippet: Ko et al, 2013 , Renal , Kidney fibrosis , Discovery: HELP-Nimblegen whole genome covering microarray; validation: bisulfite-Sequenom MassArray EpiTYPER; replication: Illumina Infinium HumanMethylation450K BeadChip , None , Discovery/validation: 12 hypertensive or diabetic chronic kidney disease, 14 controls; replication: 21 diabetic chronic kidney disease, 66 controls , Human kidney tubule epithelial cell tissue samples from healthy living transplants or surgical nephrectomies , Not provided , Discovery: 4751 DMRs/1535 genes; replication: 1061 genes , Cell adhesion, development , COLIVA1, DSCAM, DPT.

    Techniques: Genome Wide, RNA Expression, Preserving, Methylation, Microarray, Immunohistochemistry, Western Blot, Activity Assay, Binding Assay, Methylated DNA Immunoprecipitation, Biomarker Discovery, DNA Methylation Assay, Cell Culture, Extraction, Methylation Sequencing, Transformation Assay, Sequencing, Methylated DNA Immunoprecipitation Sequencing, Phospho-proteomics, Glycoproteomics, Luciferase, Starch, In Vitro, Expressing, Transduction, Ubiquitin Proteomics, Clinical Proteomics, Membrane, Cell Differentiation, Control