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10X Genomics zebrafish transcriptomic data set
Zebrafish Transcriptomic Data Set, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/zebrafish+transcriptomic+data+set/10x+cancer+data+lung+squamous+visium/pm32694805-201-2-5
Average 86 stars, based on 1 article reviews
zebrafish transcriptomic data set - by Bioz Stars, 2026-09
86/100 stars

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Expressing:

Article Title: MNDA promotes immunosuppression in microsatellite instability-high colorectal cancer by facilitating PMN-MDSC infiltration via H3K18 lactylation.
Article Snippet: .. Spatial distribution of cell subpopulations and MNDA expression in colorectal cancer To determine the spatial distribution of cell subpopulations in the colon cancer TME, spatial transcriptome sequencing data for colon cancer were obtained from the 10x Genomics database (https://www.10xgenomics.com) (Fig. 3A and C). ..

Article Title: Dissection of immunotherapeutic predictive versus prognostic transcriptional programs identifies SLC22A5-centric carnitine metabolism-driven resistance to anti-PD-(L)1 treatment in non-small cell lung cancer.
Article Snippet: .. Analysis of spatial transcriptomics data To investigate the spatial expression pattern of SLC22A5, a preprocessed spatial transcriptomics dataset, "Visium Human Lung Cancer, 11 mm Capture Area (FFPE)," was downloaded from the 10x Genomics public dataset repository. ..

Sequencing:

Article Title: MNDA promotes immunosuppression in microsatellite instability-high colorectal cancer by facilitating PMN-MDSC infiltration via H3K18 lactylation.
Article Snippet: .. Spatial distribution of cell subpopulations and MNDA expression in colorectal cancer To determine the spatial distribution of cell subpopulations in the colon cancer TME, spatial transcriptome sequencing data for colon cancer were obtained from the 10x Genomics database (https://www.10xgenomics.com) (Fig. 3A and C). ..

Article Title: Benchmarking cell-type deconvolution in cross-platform transcriptomic data
Article Snippet: For example, 10x Visium v1 3’ captures transcripts through poly-A tail binding, whereas 10x Visium v2 and the Nanostring GeoMx DSP relies on barcoded probes that hybridize to target mRNA. (ii) Gene panel: The specific set of genes covered by a transcriptomic platform. .. The gene panel may cover the whole transcriptome (whole transcriptome assay, WTA) or a pre-defined subset of genes (e.g., 10x Genomics Visium targeted Pan Cancer and targeted immunology panels). (iii) Sequencing depth: The number of sequencing reads measured per cell in the region of interest or sample. ..

other:

Article Title: Toward Graph-Based Decoding of Tumor Evolution: Spatial Inference of Copy Number Variations
Article Snippet: CRC VisiumHD data is retrieved from 10× genomics ( https://www.10xgenomics.com/products/visium-hd-spatial-gene-expression/dataset-human-crc/ , accessed on 10 July 2024).

Article Title: Deconvolution of Sparse-count RNA Sequencing Data for Tumor Cells Using Embedded Negative Binomial Distributions
Article Snippet: The 10X Visium lung squamous cancer data is available at http://www.10xgenomics.com/resources/datasets/human-lung-cancer-ffpe-2-standard .

Spatial Transcriptomics:

Article Title: Dissection of immunotherapeutic predictive versus prognostic transcriptional programs identifies SLC22A5-centric carnitine metabolism-driven resistance to anti-PD-(L)1 treatment in non-small cell lung cancer.
Article Snippet: .. Analysis of spatial transcriptomics data To investigate the spatial expression pattern of SLC22A5, a preprocessed spatial transcriptomics dataset, "Visium Human Lung Cancer, 11 mm Capture Area (FFPE)," was downloaded from the 10x Genomics public dataset repository. ..

Formalin-fixed Paraffin-Embedded:

Article Title: Dissection of immunotherapeutic predictive versus prognostic transcriptional programs identifies SLC22A5-centric carnitine metabolism-driven resistance to anti-PD-(L)1 treatment in non-small cell lung cancer.
Article Snippet: .. Analysis of spatial transcriptomics data To investigate the spatial expression pattern of SLC22A5, a preprocessed spatial transcriptomics dataset, "Visium Human Lung Cancer, 11 mm Capture Area (FFPE)," was downloaded from the 10x Genomics public dataset repository. ..



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10X Genomics zebrafish transcriptomic data set
Zebrafish Transcriptomic Data Set, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/zebrafish+transcriptomic+data+set/10x+cancer+data+lung+squamous+visium/pm32694805-201-2-5
Average 86 stars, based on 1 article reviews
zebrafish transcriptomic data set - by Bioz Stars, 2026-09
86/100 stars
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