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10X Genomics xenium cell segmentation kit
Xenium Cell Segmentation Kit, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xenium+cell+segmentation+kit/10x+cell+onboard+segmentation+xenium/pmc13201536-464-6-10
Average 86 stars, based on 1 article reviews
xenium cell segmentation kit - by Bioz Stars, 2026-11
86/100 stars

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Related Articles

Staining:

Article Title: Deep phenotyping of skin tissue remodeling in patients with systemic sclerosis treated with CD19-CAR T cells
Article Snippet: .. Tissue sections were subsequently stained using Xenium Cell Segmentation Kit (10X Genomics) for multimodal cell segmentation, and autofluorescence was minimized using a quenching reagent (10X Genomics) before counterstaining with DAPI and loading into the Xenium Analyzer. cISH and multi-cycle imaging were performed according to the Xenium Analyzer User Guide (10X Genomics, CG000584 Rev G). .. Images processing, transcript decoding, and multimodal cell segmentation were automatically executed using Xenium Onboard Analysis (10X Genomics, version 3.0).

Article Title: A longitudinal single-cell and spatial multiomic atlas of pediatric high-grade glioma
Article Snippet: Sample preparation for Xenium spatial transcriptomics was done using the Xenium Slides & Sample Prep Reagents (10X Genomics, 1000460). .. For cell segmentation staining using the Xenium Cell Segmentation Add-on Kit (10X Genomics, 1000662), tissue slides were washed in a series of ethanol concentrations for 2 min in each: 70% ethanol, twice in 100% ethanol and 70% ethanol. ..

Article Title: SubCellSpace: Automated characterization of subcellular mRNA localization patterns in spatial transcriptomics
Article Snippet: .. All remaining steps were performed on the prepared cell culture slides according to the Xenium In Situ Gene Expression – with Cell Segmentation Staining (CG000749, Rev A, 10x Genomics) apart from the autofluorescence quenching step which was omitted. ..

Article Title: SpatialBench : Comparative cross-platform benchmarking of high-resolution spatial transcriptomics using matched mouse lymphoid tissue
Article Snippet: .. To enhance cell segmentation accuracy, selected samples (CTRL172, CTRL173, CTRL174, WT709, WT710) were stained overnight with Xenium Cell Segmentation Add-on Kit (10x Genomics, 1000662) as described in the manufacturer’s protocol (CG000749, Rev B). ..

Article Title: Deep phenotyping of skin tissue remodeling in patients with systemic sclerosis treated with CD19-CAR T cells.
Article Snippet: .. Tissue sections were subsequently stained using XeniumCell Segmentation Kit (10XGenomics) for multimodal cell segmentation, and autofluorescence was minimized using a quenching reagent (10X Genomics) before counterstaining with DAPI and loading into the Xenium Analyzer. cISH and multi-cycle imaging were performed according to the Xenium Analyzer User Guide (10X Genomics, CG000584 Rev G). .. Images processing, transcript decoding, and multimodal cell segmentationwere automatically executedusingXeniumOnboardAnalysis (10X Genomics, version 3.0).

Imaging:

Article Title: Deep phenotyping of skin tissue remodeling in patients with systemic sclerosis treated with CD19-CAR T cells
Article Snippet: .. Tissue sections were subsequently stained using Xenium Cell Segmentation Kit (10X Genomics) for multimodal cell segmentation, and autofluorescence was minimized using a quenching reagent (10X Genomics) before counterstaining with DAPI and loading into the Xenium Analyzer. cISH and multi-cycle imaging were performed according to the Xenium Analyzer User Guide (10X Genomics, CG000584 Rev G). .. Images processing, transcript decoding, and multimodal cell segmentation were automatically executed using Xenium Onboard Analysis (10X Genomics, version 3.0).

Article Title: Deep phenotyping of skin tissue remodeling in patients with systemic sclerosis treated with CD19-CAR T cells.
Article Snippet: .. Tissue sections were subsequently stained using XeniumCell Segmentation Kit (10XGenomics) for multimodal cell segmentation, and autofluorescence was minimized using a quenching reagent (10X Genomics) before counterstaining with DAPI and loading into the Xenium Analyzer. cISH and multi-cycle imaging were performed according to the Xenium Analyzer User Guide (10X Genomics, CG000584 Rev G). .. Images processing, transcript decoding, and multimodal cell segmentationwere automatically executedusingXeniumOnboardAnalysis (10X Genomics, version 3.0).

Morphology:

Article Title: CMAS dampens anti-tumor immunity and associates with response to neoadjuvant immunotherapy in melanoma
Article Snippet: .. Additional 10x cell segmentation module was added, morphology markers targeting the cell membrane, 18s ribosomal RNA and cytoskeletal proteins were incubated overnight (CG000750 | Rev B, 10x Genomics). ..

Membrane:

Article Title: CMAS dampens anti-tumor immunity and associates with response to neoadjuvant immunotherapy in melanoma
Article Snippet: .. Additional 10x cell segmentation module was added, morphology markers targeting the cell membrane, 18s ribosomal RNA and cytoskeletal proteins were incubated overnight (CG000750 | Rev B, 10x Genomics). ..

Cytoskeletal:

Article Title: CMAS dampens anti-tumor immunity and associates with response to neoadjuvant immunotherapy in melanoma
Article Snippet: .. Additional 10x cell segmentation module was added, morphology markers targeting the cell membrane, 18s ribosomal RNA and cytoskeletal proteins were incubated overnight (CG000750 | Rev B, 10x Genomics). ..

Incubation:

Article Title: CMAS dampens anti-tumor immunity and associates with response to neoadjuvant immunotherapy in melanoma
Article Snippet: .. Additional 10x cell segmentation module was added, morphology markers targeting the cell membrane, 18s ribosomal RNA and cytoskeletal proteins were incubated overnight (CG000750 | Rev B, 10x Genomics). ..

Cell Culture:

Article Title: SubCellSpace: Automated characterization of subcellular mRNA localization patterns in spatial transcriptomics
Article Snippet: .. All remaining steps were performed on the prepared cell culture slides according to the Xenium In Situ Gene Expression – with Cell Segmentation Staining (CG000749, Rev A, 10x Genomics) apart from the autofluorescence quenching step which was omitted. ..

In Situ:

Article Title: SubCellSpace: Automated characterization of subcellular mRNA localization patterns in spatial transcriptomics
Article Snippet: .. All remaining steps were performed on the prepared cell culture slides according to the Xenium In Situ Gene Expression – with Cell Segmentation Staining (CG000749, Rev A, 10x Genomics) apart from the autofluorescence quenching step which was omitted. ..

Gene Expression:

Article Title: SubCellSpace: Automated characterization of subcellular mRNA localization patterns in spatial transcriptomics
Article Snippet: .. All remaining steps were performed on the prepared cell culture slides according to the Xenium In Situ Gene Expression – with Cell Segmentation Staining (CG000749, Rev A, 10x Genomics) apart from the autofluorescence quenching step which was omitted. ..



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