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visual molecular dynamics software program v1.9.4a51  (Molecular Dynamics Inc)

 
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    Molecular Dynamics Inc visual molecular dynamics software program v1.9.4a51
    Visual Molecular Dynamics Software Program V1.9.4a51, supplied by Molecular Dynamics Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/visual+molecular+dynamics+software+program/visual+molecular+dynamics+version+1+9+4a51/pmc09283540-393-6-2
    Average 90 stars, based on 1 article reviews
    visual molecular dynamics software program v1.9.4a51 - by Bioz Stars, 2026-09
    90/100 stars

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    other:

    Article Title: A monomeric mycobacteriophage immunity repressor utilizes two domains to recognize an asymmetric DNA sequence
    Article Snippet: The Visual Molecular Dynamics (VMD) software program V1.9.4a51 was used to produce Bio3d-compatible inputs from the Gromacs simulation data format.

    Article Title: Oxygen Interactions with Covalently Grafted 2D Nanometric Carboxyphenyl Thin Films—An Experimental and DFT Study
    Article Snippet: Noncovalent interaction (NCI) surface plots were generated using Multiwfn and VMD (Visual Molecular Dynamics, version 1.9.4a51) software [29,30].

    Article Title: Identification and functional assays of single-nucleotide variants of opsins genes in melanocytic tumors.
    Article Snippet: 436 | Pigment Cell Melanoma Res.. 2022;35:436–449.wileyonlinelibrary.com/journal/pcmr © 2022 John Wiley & Sons A/S.. Published by John Wiley & Sons Ltd. Wei Zhang, Wen Zeng and Jianglong Feng authors contributed equally.

    Article Title: Towards Understanding PRPS1 as a Molecular Player in Immune Response in Yellow Drum ( Nibea albiflora )
    Article Snippet: The tertiary structure of Na PRPS1 was predicted with SWISS-MODEL workspace ( swissmodel.expasy.org 10 June 2021) and visualized by Visual Molecular Dynamics 1.9.4a51.

    Article Title: The epsilon toxin from Clostridium perfringens stimulates calcium‐activated chloride channels, generating extracellular vesicles in Xenopus oocytes
    Article Snippet: 238 MAL molecular representation 239 The protein structure of human MAL (UniProt, P21145) and X. laevis MAL (UniProt, 240 Q6PBB5) was obtained from the AlphaFold Database (https://alphafold.ebi.ac.uk/) and 241 represented in Visual Molecular Dynamics (VMD) version 1.9.4a51 (December, 2020).

    Article Title: Ionic Hydrogel‐Based Moisture Electric Generators for Underwater Electronics
    Article Snippet: The color mapped isosurface graphs of ESP were rendered by Visual Molecular Dynamics (VMD) 1.9.4a51 program [7].

    Software:

    Article Title: Catalytic Decomposition of Toluene over Fe2O3 Nanocluster During Chemical Looping Gasification (CLG): ReaxFF MD Approach
    Article Snippet: Chemical looping gasification (CLG) is an effective technology for efficient utilization of coal, biomass and other fuels.. In this work, the detailed mechanism of catalytic decomposition during CLG for toluene, a tar model compound, was studied by using reactive force field molecular dynamics (ReaxFF MD) method.. Results show that toluene hardly decomposes at temperature lower than 2000 K. Improving temperature could significantly improve decomposition efficiency but also enhances the polymerization to produce PAHs and soot precursor, with largest molecule weight of 2175 (C177H51, 3000 K, 400 ps).



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