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visium array slide  (10X Genomics)

 
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    10X Genomics visium array slide
    Visium Array Slide, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/visium+array+slide/expression+gene+slides+spatial+visium/pm38976559-382-7-18
    Average 86 stars, based on 1 article reviews
    visium array slide - by Bioz Stars, 2026-11
    86/100 stars

    Images

    Related Articles

    Gene Expression:

    Article Title: Mapping neuro-vascular unit communications reveals distinct angiogenic programs across developing mouse brain regions.
    Article Snippet: .. Reactions were carried out with the Visium Spatial Gene Expression (GEX) and Tissue Optimization (TO) Slide & Reagent Kits according to the manufacturer’s protocol with recommended reagents (10X Genomics, 1000193 and 1000187). ..

    Article Title: A glycan-based adjuvant expands the breadth and duration of protection of mRNA-based vaccines.
    Article Snippet: DLS (ZetaPlus Zeta Potential Analyzer; Brookhaven Instruments) was performed to determine the stability of each active pharmaceutical ingredient in the FDC solution. .. 5′ gene expression (GEX) libraries, single-cell V(D)J libraries (10x Genomics, 1000255) and cell surface protein libraries were prepared according to the manufacturer’s protocols. .. Library quality was evaluated using an Agilent 2200 TapeStation, and final libraries were quantified by qPCR using the KAPA Library Quantification Kit for Illumina platforms.

    Article Title: WNT signaling in human pluripotent stem cells promotes HDAC2-dependent epigenetic programs and development of retinoic acid-responsive mesoderm.
    Article Snippet: 10,000 nuclei per sample were processed and isolated using the Nuclei EZ Prep kit (Sigma-Aldrich) according to the manufacturer’s protocol. .. Libraries for both ATAC-seq and RNA-seq were prepared using the Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle (10x Genomics, PN-1000283). .. Cells were first stained for aldehyde dehydrogenase expression using the ALDEFLUOR Kit (StemCell Technologies, Cat# 01700) according to the manufacturer’s protocol.

    Single Cell:

    Article Title: A glycan-based adjuvant expands the breadth and duration of protection of mRNA-based vaccines.
    Article Snippet: DLS (ZetaPlus Zeta Potential Analyzer; Brookhaven Instruments) was performed to determine the stability of each active pharmaceutical ingredient in the FDC solution. .. 5′ gene expression (GEX) libraries, single-cell V(D)J libraries (10x Genomics, 1000255) and cell surface protein libraries were prepared according to the manufacturer’s protocols. .. Library quality was evaluated using an Agilent 2200 TapeStation, and final libraries were quantified by qPCR using the KAPA Library Quantification Kit for Illumina platforms.

    Article Title: Multilayer network approaches to omics data integration in digital twins for cancer research
    Article Snippet: .. This process requires the non-trivial development of new methods that capture salient information from either estimation of cell type proportions from bulk RNA-seq , or from single-cell spatial (Visium/Xenium) ( ) and non-spatial datasets (10x Genomics scRNA-seq/scATAC-seq) ( ). ..

    Article Title: WNT signaling in human pluripotent stem cells promotes HDAC2-dependent epigenetic programs and development of retinoic acid-responsive mesoderm.
    Article Snippet: 10,000 nuclei per sample were processed and isolated using the Nuclei EZ Prep kit (Sigma-Aldrich) according to the manufacturer’s protocol. .. Libraries for both ATAC-seq and RNA-seq were prepared using the Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle (10x Genomics, PN-1000283). .. Cells were first stained for aldehyde dehydrogenase expression using the ALDEFLUOR Kit (StemCell Technologies, Cat# 01700) according to the manufacturer’s protocol.

    RNA Sequencing:

    Article Title: Multilayer network approaches to omics data integration in digital twins for cancer research
    Article Snippet: .. This process requires the non-trivial development of new methods that capture salient information from either estimation of cell type proportions from bulk RNA-seq , or from single-cell spatial (Visium/Xenium) ( ) and non-spatial datasets (10x Genomics scRNA-seq/scATAC-seq) ( ). ..

    Article Title: WNT signaling in human pluripotent stem cells promotes HDAC2-dependent epigenetic programs and development of retinoic acid-responsive mesoderm.
    Article Snippet: 10,000 nuclei per sample were processed and isolated using the Nuclei EZ Prep kit (Sigma-Aldrich) according to the manufacturer’s protocol. .. Libraries for both ATAC-seq and RNA-seq were prepared using the Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle (10x Genomics, PN-1000283). .. Cells were first stained for aldehyde dehydrogenase expression using the ALDEFLUOR Kit (StemCell Technologies, Cat# 01700) according to the manufacturer’s protocol.

    other:

    Article Title: Melanoma cell states shape spatial tumor-immune ecosystems to dictate the efficacy of anti-PD1 immunotherapy.
    Article Snippet: Spatial transcriptomic data were generated by the CRCL (Cancer Research Center Of Lyon) Cancer Genomics Platform using Visium CytAssist Spatial gene expression for FFPE, Human Transcriptome, kit (10X Genomics), according to the manufacturer’s guidelines.



    Similar Products

    genomics visium array slides  (10X Genomics)
    86
    10X Genomics genomics visium array slides
    Fig. 5. SHT regulates genes expression in renal outer CTX. (A) The experimental design of spatial multi-omics. (B) UMAP dimensionality reduction of spatially resolved transcriptomic spots to visualize clusters. The x-axis and y-axis stand for PC1 and PC2 of UMAP dimensionality reduction in the above figure. Every point in the panel symbolizes a spot. Different colored spots represent different groups. Following the color of the above figure, the below panel depicts the precise spatial distribution of various clusters in the tissue slice of each sample. (C) The heatmap showing the relative intensities of differential gene expression in the outer CTX, inner CTX, outer MDLA, and inner MDLA across the three experimental groups. (D) Oat of tissue map in situ based on 10 <t>×</t> <t>Genomics</t> <t>Visium</t> platform. (E) IHC showing the distribution of Odc1 in renal outer CTX of rats in the three experimental groups. Scale, 50 µm.
    Genomics Visium Array Slides, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/visium+array+slide/expression+gene+slides+spatial+visium/pm40233505-106-17-21
    Average 86 stars, based on 1 article reviews
    genomics visium array slides - by Bioz Stars, 2026-11
    86/100 stars
    		  Buy from Supplier
    visium array slide  (10X Genomics)
    86
    10X Genomics visium array slide
    Fig. 5. SHT regulates genes expression in renal outer CTX. (A) The experimental design of spatial multi-omics. (B) UMAP dimensionality reduction of spatially resolved transcriptomic spots to visualize clusters. The x-axis and y-axis stand for PC1 and PC2 of UMAP dimensionality reduction in the above figure. Every point in the panel symbolizes a spot. Different colored spots represent different groups. Following the color of the above figure, the below panel depicts the precise spatial distribution of various clusters in the tissue slice of each sample. (C) The heatmap showing the relative intensities of differential gene expression in the outer CTX, inner CTX, outer MDLA, and inner MDLA across the three experimental groups. (D) Oat of tissue map in situ based on 10 <t>×</t> <t>Genomics</t> <t>Visium</t> platform. (E) IHC showing the distribution of Odc1 in renal outer CTX of rats in the three experimental groups. Scale, 50 µm.
    Visium Array Slide, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/visium+array+slide/expression+gene+slides+spatial+visium/pm38976559-382-7-18
    Average 86 stars, based on 1 article reviews
    visium array slide - by Bioz Stars, 2026-11
    86/100 stars
    		  Buy from Supplier

    Image Search Results


    Fig. 5. SHT regulates genes expression in renal outer CTX. (A) The experimental design of spatial multi-omics. (B) UMAP dimensionality reduction of spatially resolved transcriptomic spots to visualize clusters. The x-axis and y-axis stand for PC1 and PC2 of UMAP dimensionality reduction in the above figure. Every point in the panel symbolizes a spot. Different colored spots represent different groups. Following the color of the above figure, the below panel depicts the precise spatial distribution of various clusters in the tissue slice of each sample. (C) The heatmap showing the relative intensities of differential gene expression in the outer CTX, inner CTX, outer MDLA, and inner MDLA across the three experimental groups. (D) Oat of tissue map in situ based on 10 × Genomics Visium platform. (E) IHC showing the distribution of Odc1 in renal outer CTX of rats in the three experimental groups. Scale, 50 µm.

    Journal: Phytomedicine : international journal of phytotherapy and phytopharmacology

    Article Title: Spatially resolved multi-omics reveals the renal cortex-metabolic reprogramming of Shenhua Tablet for intervention on IgA nephropathy.

    doi: 10.1016/j.phymed.2025.156742

    Figure Lengend Snippet: Fig. 5. SHT regulates genes expression in renal outer CTX. (A) The experimental design of spatial multi-omics. (B) UMAP dimensionality reduction of spatially resolved transcriptomic spots to visualize clusters. The x-axis and y-axis stand for PC1 and PC2 of UMAP dimensionality reduction in the above figure. Every point in the panel symbolizes a spot. Different colored spots represent different groups. Following the color of the above figure, the below panel depicts the precise spatial distribution of various clusters in the tissue slice of each sample. (C) The heatmap showing the relative intensities of differential gene expression in the outer CTX, inner CTX, outer MDLA, and inner MDLA across the three experimental groups. (D) Oat of tissue map in situ based on 10 × Genomics Visium platform. (E) IHC showing the distribution of Odc1 in renal outer CTX of rats in the three experimental groups. Scale, 50 µm.

    Article Snippet: Two adjacent slices were placed on the SUPERFROST PLUS slides (Thermo Fisher, the USA) and 10 × Genomics Visium array slides (https://www.10xgenomics.co m/) for spatial metabolomics and transcriptomics analyses, respectively.

    Techniques: Expressing, Biomarker Discovery, Gene Expression, In Situ

    Fig. 6. SHT regulates the transcriptional heterogeneity of glomeruli and renal tubules in the outer CTX. (A) UMAP and in situ image showing the spatial distribution of diseased and normal glomeruli and renal tubules in the renal outer CTX of rats in the three group samples. (B) Spatial images and expression levels of G6pc1, Pck1, and Gpx3 in glomeruli based on 10x Genomics Visium platform. (C) The correlation analysis showing the negative correlation between G6pc1 and ascorbic acid, whereas the positive correlation between Gpx3 and NAD in renal tubules. The graph below displaying the spatial distribution of ascorbic acid and NAD. (D) Spatial images and expression levels of Gclc, Gpx3, and Oat in glomeruli based on 10x Genomics Visium platform.

    Journal: Phytomedicine : international journal of phytotherapy and phytopharmacology

    Article Title: Spatially resolved multi-omics reveals the renal cortex-metabolic reprogramming of Shenhua Tablet for intervention on IgA nephropathy.

    doi: 10.1016/j.phymed.2025.156742

    Figure Lengend Snippet: Fig. 6. SHT regulates the transcriptional heterogeneity of glomeruli and renal tubules in the outer CTX. (A) UMAP and in situ image showing the spatial distribution of diseased and normal glomeruli and renal tubules in the renal outer CTX of rats in the three group samples. (B) Spatial images and expression levels of G6pc1, Pck1, and Gpx3 in glomeruli based on 10x Genomics Visium platform. (C) The correlation analysis showing the negative correlation between G6pc1 and ascorbic acid, whereas the positive correlation between Gpx3 and NAD in renal tubules. The graph below displaying the spatial distribution of ascorbic acid and NAD. (D) Spatial images and expression levels of Gclc, Gpx3, and Oat in glomeruli based on 10x Genomics Visium platform.

    Article Snippet: Two adjacent slices were placed on the SUPERFROST PLUS slides (Thermo Fisher, the USA) and 10 × Genomics Visium array slides (https://www.10xgenomics.co m/) for spatial metabolomics and transcriptomics analyses, respectively.

    Techniques: In Situ, Expressing