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u133a array dataset  (Thermo Fisher)


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    Thermo Fisher u133a array dataset
    LncRNA expression in breast cancer patient populations which was acquired using an Affymetrix <t>U133A</t> array dataset, and is depicted by box-whisker-plots. In this analysis, ERRLR01 expression was stratified into 4 subpopulations, and the mean rank expression was reported (A). 1 = TNBC, n = 577; 2 = Luminal A, n = 1432; 3 = Luminal B, n = 632; 4 = HER2+, n = 301. ERRLR01 expression in the TCGA data set (B), and data are presented in a log(2) transformed format. 1 = TNBC, n = 154; 2 = Luminal A, n = 91; 3 = Luminal B, n = 538; 4 = HER2+, n = 53. *denotes significance at P < 1 × 10−16 as determined by Kruskal-Wallis one-way variance analysis testing.
    U133a Array Dataset, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    u133a array dataset - by Bioz Stars, 2026-09
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    1) Product Images from "linc00673 (ERRLR01) is a prognostic indicator of overall survival in breast cancer"

    Article Title: linc00673 (ERRLR01) is a prognostic indicator of overall survival in breast cancer

    Journal: Transcription

    doi: 10.1080/21541264.2017.1329684

    LncRNA expression in breast cancer patient populations which was acquired using an Affymetrix U133A array dataset, and is depicted by box-whisker-plots. In this analysis, ERRLR01 expression was stratified into 4 subpopulations, and the mean rank expression was reported (A). 1 = TNBC, n = 577; 2 = Luminal A, n = 1432; 3 = Luminal B, n = 632; 4 = HER2+, n = 301. ERRLR01 expression in the TCGA data set (B), and data are presented in a log(2) transformed format. 1 = TNBC, n = 154; 2 = Luminal A, n = 91; 3 = Luminal B, n = 538; 4 = HER2+, n = 53. *denotes significance at P < 1 × 10−16 as determined by Kruskal-Wallis one-way variance analysis testing.
    Figure Legend Snippet: LncRNA expression in breast cancer patient populations which was acquired using an Affymetrix U133A array dataset, and is depicted by box-whisker-plots. In this analysis, ERRLR01 expression was stratified into 4 subpopulations, and the mean rank expression was reported (A). 1 = TNBC, n = 577; 2 = Luminal A, n = 1432; 3 = Luminal B, n = 632; 4 = HER2+, n = 301. ERRLR01 expression in the TCGA data set (B), and data are presented in a log(2) transformed format. 1 = TNBC, n = 154; 2 = Luminal A, n = 91; 3 = Luminal B, n = 538; 4 = HER2+, n = 53. *denotes significance at P < 1 × 10−16 as determined by Kruskal-Wallis one-way variance analysis testing.

    Techniques Used: Expressing, Whisker Assay, Transformation Assay

    Related Articles

    Microarray:

    Article Title: Single-Cell Heterogeneity of EGFR Pathway Is Linked to Unique Signatures of Drug Response and Malignancy in Patient Derived Glioblastoma Stem Cells.
    Article Snippet: .. Because of the lack of gene name overlap from the Affymetrix U133A array used by TCGA and the Affymetrix U133 plus 2.0 microarray used for our classifications, only 789 of the original 840 genes were used to classify the samples. ..

    Article Title: Single-Cell Heterogeneity of EGFR Pathway Is Linked to Unique Signatures of Drug Response and Malignancy in Patient Derived Glioblastoma Stem Cells.
    Article Snippet: .. All rights reserved. gene name overlap from the Affymetrix U133A array used by TCGA and the Affymetrix U133 plus 2.0 microarray used for our classifications, only 789 of the original 840 genes were used to classify the samples. ..

    other:

    Article Title: Influence of Mesalazine on Ferroptosis-Related Gene Expression in In Vitro Colorectal Cancer Culture.
    Article Snippet: The analysis was conducted with GeneChipTM Human Genome U133A 2.0 Array in combination with the GeneChipTM 3′ IVT PLUS Reagent Kit (Applied Biosystems, Carlsbad, CA, USA) in accordance with the manufacturer’s instructions.

    Article Title: The Prognostic Significance of TRs in Hepatocellular Carcinoma: Insights from TCGA and GEO Databases
    Article Snippet: GSE14520 , Roessler S et al. 2009 , 247 , 241 , Affymetrix Human Genome U133A 2.0 Array/Affymetrix HT Human Genome U133A Array.

    Article Title: The Prognostic Significance of TRs in Hepatocellular Carcinoma: Insights from TCGA and GEO Databases
    Article Snippet: GSE60502 , Kao KJ, 2014 , 18 , 18 , Affymetrix Human Genome U133A Array.

    Article Title: Alternative Complement Pathway in Carotid Atherosclerosis: Low Plasma Properdin Levels Associate With Long‐Term Cardiovascular Mortality
    Article Snippet: The Human Genome U133A 2.0 Array encoding 14 500 genes was purchased from Affymetrix (Santa Clara, CA), and hybridization was performed according to the manufacturer’s 2- cycle target labeling protocol as previously described.22

    Generated:

    Article Title: Silencing of O-GlcNAc transferase attenuated O-GlcNAcylation and metastatic potentials of melanoma cells through suppression of Akt-NFkB signaling pathway.
    Article Snippet: O-GlcNAcylation is an important biological process in regulating the function of many nucleocytoplasmic proteins in cells.. Enhancement of O-GlcNAcylation was associated with cancer development and progression.. Here, we demonstrated the involvement of O-GlcNAcylation in melanoma metastasis.

    Gene Expression:

    Article Title: Mature B-Cell Lymphoma And Leukemia Study III
    Article Snippet: .. Measure Description: Gene expression levels in BL vs. non-BL will be analyzed through approximately 22,000 probesets on the Affymetrix U133A GeneChip by using two-factor analysis of variance model for each gene.. Time Frame: 1 year after the last participant is enrolled ..



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    Image Search Results


    LncRNA expression in breast cancer patient populations which was acquired using an Affymetrix U133A array dataset, and is depicted by box-whisker-plots. In this analysis, ERRLR01 expression was stratified into 4 subpopulations, and the mean rank expression was reported (A). 1 = TNBC, n = 577; 2 = Luminal A, n = 1432; 3 = Luminal B, n = 632; 4 = HER2+, n = 301. ERRLR01 expression in the TCGA data set (B), and data are presented in a log(2) transformed format. 1 = TNBC, n = 154; 2 = Luminal A, n = 91; 3 = Luminal B, n = 538; 4 = HER2+, n = 53. *denotes significance at P < 1 × 10−16 as determined by Kruskal-Wallis one-way variance analysis testing.

    Journal: Transcription

    Article Title: linc00673 (ERRLR01) is a prognostic indicator of overall survival in breast cancer

    doi: 10.1080/21541264.2017.1329684

    Figure Lengend Snippet: LncRNA expression in breast cancer patient populations which was acquired using an Affymetrix U133A array dataset, and is depicted by box-whisker-plots. In this analysis, ERRLR01 expression was stratified into 4 subpopulations, and the mean rank expression was reported (A). 1 = TNBC, n = 577; 2 = Luminal A, n = 1432; 3 = Luminal B, n = 632; 4 = HER2+, n = 301. ERRLR01 expression in the TCGA data set (B), and data are presented in a log(2) transformed format. 1 = TNBC, n = 154; 2 = Luminal A, n = 91; 3 = Luminal B, n = 538; 4 = HER2+, n = 53. *denotes significance at P < 1 × 10−16 as determined by Kruskal-Wallis one-way variance analysis testing.

    Article Snippet: Together, results from both patient datasets indicated that ERRLR01 expression was elevated in ERα − tumor subtypes, as compared with ERα + tumor subtypes ( p value < 1 × 10 −16 , as determined by Kruskal-Wallis analysis). fig ft0 fig mode=article f1 fig/graphic|fig/alternatives/graphic mode="anchored" m1 Open in a separate window Figure 1. caption a7 LncRNA expression in breast cancer patient populations which was acquired using an Affymetrix U133A array dataset, and is depicted by box-whisker-plots.

    Techniques: Expressing, Whisker Assay, Transformation Assay