turbosequest algorithm bioworks 3.3.1 sp1 (BioWorks Inc)

About

News

Press Release

Team

Advisors

Partners

Contact

Bioz Stars

Bioz vStars

Buy from Supplier

Structured Review

BioWorks Inc turbosequest algorithm bioworks 3.3.1 sp1
Turbosequest Algorithm Bioworks 3.3.1 Sp1, supplied by BioWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/turbosequest+algorithm/turbosequest+algorithm+bioworks+3+3+1+sp1/pm20054389-480-23-25
Average 90 stars, based on 1 article reviews

turbosequest algorithm bioworks 3.3.1 sp1 - by Bioz Stars, 2026-10

90/100 stars

Images

Tandem Mass Spectroscopy:

Article Title: Interaction of Nectarin 4 with a fungal protein triggers a microbial surveillance and defense mechanism in nectar.
Article Snippet: Understanding the biochemical mechanisms by which plants respond to microbial infection is a fundamental goal of plant science.. Extracellular dermal glycoproteins (EDGPs) are widely expressed in plant tissues and have been implicated in plant defense responses.. Although EDGPs are known to interact with fungal proteins, the downstream effects of these interactions are poorly understood.

Article Title: Narrow I.D. monolithic capillary columns for high efficiency separation and high sensitivity analysis of biomolecules
Article Snippet: .. The results of data dependent MS/MS scanning were submitted for a search against a database created for the selected model proteins and the nonredundant protein database nr.fasta using the TurboSequest algorithm (Bioworks 3.0, ThermoFinnigan). ..

Construct:

Article Title: An approach to the proteomic analysis of a breast cancer cell line (SKBR-3).
Article Snippet: .. Bioworks 3.0 is a new version of TurboSequest in which the three matching factors (Sp, Xcorr, and Cn) are used to construct a unified ranking score [18] (see Table 1). a) LC-MS/MS analysis was performed as described in Section 2.5 b) Protein description is based on assignment by TurboSequest (BioWorks 3.0) c) The unique peptides column gives the number of peptides with different sequences that are assigned to the same protein ..

Generated:

Article Title: Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii.
Article Snippet: .. Data generated for site mapping of SAMP2-protein conjugates was searched against the H. volcanii sequence database containing the common contaminants database using the TurboSequest algorithm (BioWorks 3.3.1 SP1, Thermo Fisher Scientific). ..

Article Title: Ubiquitin-like Small Archaeal Modifier Proteins (SAMPs) in Haloferax volcanii
Article Snippet: .. Data generated for site mapping of SAMP2-protein conjugates was searched against the H. volcanii sequence database containing the common contaminants database using the TurboSequest algorithm (BioWorks 3.3.1 SP1, Thermo Fisher Scientific, Inc.). ..

Sequencing:

Article Title: Structure of the F-spondin domain of mindin, an integrin ligand and pattern recognition molecule
Article Snippet: .. The resulting data were searched against the mouse mindin sequence (SwissProt accession number {"type":"entrez-protein","attrs":{"text":"Q8BMS2","term_id":"52783454","term_text":"Q8BMS2"}} Q8BMS2 ), including contaminant database using the TurboSequest algorithm (BioWorks 3.3.1 SP1; ThermoFisher). ..

Article Title: Quantitative secretome and glycome of primary human adipocytes during insulin resistance
Article Snippet: .. The resulting proteomic data was searched against a target nonredundant human ( Homo sapiens , 5-2-07) database including the common contaminants database obtained from the human International Protein Index (IPI) protein sequence database (European Bioinformatics Institute, ftp://ftp.ebi.ac.uk/pub/databases/IPI ) using the TurboSequest algorithm (BioWorks 3.3.1 SP1, Thermo Fisher Scientific Inc.) [ , ]. ..

Review