cell transcriptomic data (Broad Clinical Labs)
Structured Review

Cell Transcriptomic Data, supplied by Broad Clinical Labs, used in various techniques. Bioz Stars score: 96/100, based on 891 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/transcriptomic+sequencing+data/Single+Cell+Sequencing/pmc12957145-38-1-11
Average 96 stars, based on 891 article reviews
Images
1) Product Images from "Identification of MTURN as a trained immunity-related biomarker for heart failure via integrative transcriptomic machine learning analysis and experimental validation"
Article Title: Identification of MTURN as a trained immunity-related biomarker for heart failure via integrative transcriptomic machine learning analysis and experimental validation
Journal: Frontiers in Immunology
doi: 10.3389/fimmu.2026.1739660
Figure Legend Snippet: Identification of core genes associated with macrophage immune training and heart failure. (A) Schematic overview of human-derived macrophage trained immunity model and transcriptomic profiling workflow ( GSE235897 ). (B) The volcano plot and (C) DEGs heatmap of hMDMs from trained (n=3) and untrained (n=3) samples in the macrophage-trained immunity dataset GSE235897 (|log2FC| ≥ 0.585, p < 0.05). (D) Sample clustering dendrogram of GSE135055 dataset based on gene expression profiles. (E) Scale-free topology fit index and (F) mean connectivity analysis across a range of soft-thresholding powers. (G) Cluster dendrogram of genes showing co-expression modules identified by WGCNA in database GSE135055 . (H) Module-trait heatmap values represent correlation coefficients between healthy controls and HF samples (* p < 0.05, ** p < 0.01). (I) Venn diagram showing the overlap among heart failure DEGs, trained-immunity DEGs, and WGCNA module genes.
Techniques Used: Derivative Assay, Gene Expression, Expressing
Figure Legend Snippet: Five heart failure transcriptomic datasets were integrated with a macrophage-trained immunity model to identify immune-related biomarkers. Through DEGs analysis, WGCNA, CIBERSORT, and six machine learning algorithms, hub genes were prioritized with MTURN emerging as the top candidate. Its potential was further validated by scRNA-seq analysis, which confirmed MTURN enrichment in cardiac macrophages. Finally, MTURN expression was validated using previously published heart failure transcriptomic data and in vitro experiments.
Techniques Used: Expressing, In Vitro
Related Articles
Single Cell:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Infection:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Isolation:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Software:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Expressing:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Generated:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Gene Expression:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Sequencing:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Transcriptomics:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , RNA Sequencing:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Spatial Transcriptomics:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Labeling:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Comparison:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Luminex:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Mouse Assay:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , Indirect Immunoperoxidase Assay:Article Title: A four-dimensional framework for classifying functional states in immune cells Article Snippet: imepoints, 6 mice/timepoint); ICR mouse , St Laurent et al. 37 , Table S5 from St Laurent, G. et al. 37 . Urinary tract infection (UTI); scRNA-seq (10 patients, 10 controls); human , Reyes et al. 27 , |