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Gydle Inc software nuclear version 3.2.16
Software Nuclear Version 3.2.16, supplied by Gydle Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/transcriptome+assembly+software+trinity/nuclear+software/pmc06691002-247-8-6
Average 90 stars, based on 1 article reviews
software nuclear version 3.2.16 - by Bioz Stars, 2026-10
90/100 stars

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Related Articles

other:

Article Title: Genome-wide association study of myrtle rust (Austropuccinia psidii) resistance in Eucalyptus obliqua (subgenus Eucalyptus)
Article Snippet: Myrtle rust (caused by Austropuccinia psidii Beenken) is exotic to Australia, yet specific resistance is present in a range of naïve myrtaceous host plants.. Resistance to myrtle rust is primarily quantitative in nature and controlled by multiple interacting loci.. We undertook a genome-wide association study (GWAS) to discover relationships between nuclear genomic sequence variation and multiple aspects of resistance to A. psidii in Eucalyptus obliqua, a representative species from subgenus Eucalyptus.

Article Title: Grass endophytes
Article Snippet: Reads were mapped to the AR37 reference genome using the Gydle ‘nuclear’ program in search mode.

Article Title: Patterns of genomic diversity and linkage disequilibrium across the disjunct range of the Australian forest tree Eucalyptus globulus
Article Snippet: The raw sequence reads from the sampled E. globulus mother trees were quality filtered and aligned using Nuclear v3.2.6 (Gydle Inc., Québec, Canada) to the draft E. globulus genome assembly (X46 v33).

Sequencing:

Article Title: A novel locus conferring resistance to Puccinia hordei maps to the genomic region corresponding to Rph14 on barley chromosome 2HS
Article Snippet: Online calculator Quickcalcs (GraphPad Software Inc., United States) was used to determine the p -values from χ 2 values. .. For tGBS mapping, the genotype calling trimmed sequence data was aligned against the IBSC genome assembly of Morex v1.0 using Nuclear software (GYDLE Inc.) to map each read to the best possible chromosome location. ..

Article Title: Global Changes in Asexual Epichloë Transcriptomes during the Early Stages, from Seed to Seedling, of Symbiotum Establishment
Article Snippet: .. Raw sequence reads were quality trimmed using the Gydle nuclear program ( http://www.gydle.com (accessed on 1 April 2021)) (Gydle Inc., Quebec, QC, Canada), such that all reads ≥50 bases long were retained using a base quality cut-off value of 20. .. All high-quality reads for a given endophyte strain were mapped separately to the corresponding endophyte reference sequences using Gydle nuclear program.

Software:

Article Title: A novel locus conferring resistance to Puccinia hordei maps to the genomic region corresponding to Rph14 on barley chromosome 2HS
Article Snippet: Online calculator Quickcalcs (GraphPad Software Inc., United States) was used to determine the p -values from χ 2 values. .. For tGBS mapping, the genotype calling trimmed sequence data was aligned against the IBSC genome assembly of Morex v1.0 using Nuclear software (GYDLE Inc.) to map each read to the best possible chromosome location. ..



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