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Biotechnology Information online tblastn program
Online Tblastn Program, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tblastn+program/online+program+tblastn/pm36354810-63-18-23
Average 90 stars, based on 1 article reviews
online tblastn program - by Bioz Stars, 2026-10
90/100 stars

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Article Title: Filling in the gaps: A reevaluation of the Lygus hesperus peptidome using an expanded de novo assembled transcriptome and molecular cloning.
Article Snippet: Peptides are the largest and most diverse class of molecules modulating physiology and behavior.. Previously, we predicted a peptidome for the western tarnished plant bug, Lygus hesperus, using transcriptomic data produced from whole individuals.. A potential limitation of that analysis was the masking of underrepresented genes, in particular tissue-specific transcripts.

Article Title: Mass Spectral Charting of Neuropeptidomic Expression in the Stomatogastric Ganglion at Multiple Developmental Stages of the Lobster Homarus americanus
Article Snippet: 54 Specifically, the online program tblastn (National Center for Biotechnology Information [NCBI], Bethesda, MD; http://www.ncbi.nlm.nih.gov/BLAST/ ) was used to mine for ESTs encoding putative H. americanus peptide precursors.

Article Title: RNAi-Mediated Manipulation of Cuticle Coloration Genes in Lygus hesperus Knight (Hemiptera: Miridae)
Article Snippet: To identify genes involved in L. hesperus cuticular pigmentation, previously assembled transcriptomes [ , ] were queried using the online tblastn program (National Center for Biotechnology Information, Bethesda, MD, USA; [ ] http://blast.ncbi.nlm.nih.gov/Blast.cgi , accessed on 13 September 2022) with the database search restricted to BioProject accessions PRJNA284294, PRJNA238835, and PRJNA210219.

Article Title: RNAi-Mediated Manipulation of Cuticle Coloration Genes in Lygus hesperus Knight (Hemiptera: Miridae).
Article Snippet: To identify genes involved in L. hesperus cuticular pigmentation, previously assembled transcriptomes [7,8] were queried using the online tblastn program (National Center for Biotechnology Information, Bethesda, MD, USA; [60] http://blast.ncbi.nlm.nih.gov/Blast. cgi, accessed on 13 September 2022) with the database search restricted to BioProject accessions PRJNA284294, PRJNA238835, and PRJNA210219.

Sequencing:

Article Title: Prepatterning of Papilio xuthus caterpillar camouflage is controlled by three homeobox genes: clawless , abdominal-A , and Abdominal-B .
Article Snippet: .. Gene annotation was performed using online tBLASTn (E value < 1 × 10−5) against a National Center for Biotechnology Information reference sequence database. ..

Article Title: Prepatterning of Papilio xuthus caterpillar camouflage is controlled by three homeobox genes: clawless , abdominal-A , and Abdominal-B
Article Snippet: .. Gene annotation was performed using online tBLASTn ( E value < 1 × 10 −5 ) against a National Center for Biotechnology Information reference sequence database. ..

Article Title: AMGSEFLamide, a member of a broadly conserved peptide family, modulates multiple neural networks in Homarus americanus
Article Snippet: .. In brief, the database option of the online tblastn program (National Center for Biotechnology Information, Bethesda, MD; http://blast.ncbi.nlm.nih.gov/Blast.cgi ) was set to ‘nucleotide collection’, ‘whole-genome shotgun contigs’, ‘transcriptome shotgun assembly’ or ‘expressed sequence tags’ and restricted to data from one of a number of selected arthropod taxa ( Table S1 ); a GSEFLamide precursor predicted from the H. americanus eyestalk ganglia, i.e. prepro-GSEFLamide variant 1 ( Christie et al., 2017b ), was used as the query sequence for these searches. ..

Variant Assay:

Article Title: AMGSEFLamide, a member of a broadly conserved peptide family, modulates multiple neural networks in Homarus americanus
Article Snippet: .. In brief, the database option of the online tblastn program (National Center for Biotechnology Information, Bethesda, MD; http://blast.ncbi.nlm.nih.gov/Blast.cgi ) was set to ‘nucleotide collection’, ‘whole-genome shotgun contigs’, ‘transcriptome shotgun assembly’ or ‘expressed sequence tags’ and restricted to data from one of a number of selected arthropod taxa ( Table S1 ); a GSEFLamide precursor predicted from the H. americanus eyestalk ganglia, i.e. prepro-GSEFLamide variant 1 ( Christie et al., 2017b ), was used as the query sequence for these searches. ..



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