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app biorender rrid scr 018361 cell ranger mkfastq 10x genomics rrid scr 017344 cell ranger count 10x genomics rrid scr 017344 clij2 plugin haase  (10X Genomics)

 
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    10X Genomics app biorender rrid scr 018361 cell ranger mkfastq 10x genomics rrid scr 017344 cell ranger count 10x genomics rrid scr 017344 clij2 plugin haase
    App Biorender Rrid Scr 018361 Cell Ranger Mkfastq 10x Genomics Rrid Scr 017344 Cell Ranger Count 10x Genomics Rrid Scr 017344 Clij2 Plugin Haase, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/source+plugin+morpholibj/cell+ranger+%E2%80%A2/pm36228615-311-29-36
    Average 86 stars, based on 1 article reviews
    app biorender rrid scr 018361 cell ranger mkfastq 10x genomics rrid scr 017344 cell ranger count 10x genomics rrid scr 017344 clij2 plugin haase - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    other:

    Article Title:
    Article Snippet: Sample demultiplexing, read alignment and counting of barcodes and unique molecular identifiers (UMIs) were performed using Cell Ranger (v_3.1.0; 10x Genomics).

    Article Title:
    Article Snippet: After demultiplexing using Cell Ranger ( www.10xgenomics.com ), we retrieved 1368 to 3097 cells (median 1948 cells) per a sample, and totally 21,411 cells with transcriptomes ( Supplementary table 2 ).

    Article Title: Distinct CD8 + T cell types associated with COVID-19 severity in unvaccinated HLA-A2 + patients
    Article Snippet: FASTQ files were processed by Cell Ranger v.6.1.2 (10x Genomics) software using the human GRCh38 (GENCODE v32/Ensembl98) genome as a reference.

    Article Title: Distinct CD8 + T cell types associated with COVID-19 severity in unvaccinated HLA-A2 + patients
    Article Snippet: Cell Ranger (version 6.1.2) , 10x Genomics , https://www.10xgenomics.com/.

    Article Title: scPASU: A computational protocol for quantifying polyadenylation site usage and alternative polyadenylation from 3′ scRNA-seq data
    Article Snippet: Install Cell Ranger v.7.1.0 or higher as detailed here: https://www.10xgenomics.com/support/software/cell-ranger/latest/tutorials/cr-tutorial-in . b.


    Sequencing:

    Article Title: Pulsed photobiomodulation reprograms the tumor immune microenvironment to restore local T cell-mediated antitumor immunity
    Article Snippet: Sequencing libraries were constructed according to the kit instructions and run on an Illumina NovaSeq 6000 platform to obtain high-depth paired-end reads. .. Raw sequencing reads were processed using Cell Ranger v7.2.0 (10x Genomics) and aligned to the mm10 mouse reference genome. ..

    Functional Assay:

    Article Title: Regenerative repair is connected to early and specific structural, immune, and metabolic MSC signatures in adult mammals.
    Article Snippet: Sequencing was performed on a NextSeq550 System (Illumina, San Diego, CA, USA) using 2x75 bp sequencing to an average of 25,000 reads per cell. .. The scRNAseq data reported in this publication have been deposited in the Functional Genomics Data Array Express (EMBL-EBI) with the accession number (E-MTAB-14552). scRNA-seq data processing ScRNA-seq data were processed using Cell Ranger v6.1.1 (10X Genomics; RRID:SCR_017344). ..



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